RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 PCBD1P61457 104 aa11.73□□□□□ -0.53
VEGFA-201ENST00000230480 PLP2Q04941 152 aa11.73□□□□□ -0.53
VEGFA-201ENST00000230480 TBC1D28Q2M2D7 210 aa11.73□□□□□ -0.53
VEGFA-201ENST00000230480 ELFN2Q5R3F8 820 aa11.73□□□□□ -0.53
VEGFA-201ENST00000230480 SPATA46Q5T0L3 261 aa11.73□□□□□ -0.53
VEGFA-201ENST00000230480 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.73□□□□□ -0.53
VEGFA-201ENST00000230480 PARP8Q8N3A8 854 aa11.73□□□□□ -0.53
VEGFA-201ENST00000230480 BBS1Q8NFJ9 593 aa11.73□□□□□ -0.53
VEGFA-201ENST00000230480 OR52L1Q8NGH7 329 aa11.73□□□□□ -0.53
VEGFA-201ENST00000230480 C10orf105Q8TEF2 133 aa11.73□□□□□ -0.53
VEGFA-201ENST00000230480 C4orf45Q96LM5 186 aa11.73□□□□□ -0.53
VEGFA-201ENST00000230480 AMELYQ99218 206 aa11.73□□□□□ -0.53
VEGFA-201ENST00000230480 OR2J1Q9GZK6 312 aa11.73□□□□□ -0.53
VEGFA-201ENST00000230480 NDEL1Q9GZM8 345 aa11.73□□□□□ -0.53
VEGFA-201ENST00000230480 SEMA6AQ9H2E6 1030 aa11.73□□□□□ -0.53
VEGFA-201ENST00000230480 RNF223E7ERA6 249 aa11.72□□□□□ -0.53
VEGFA-201ENST00000230480 DOK2O60496 412 aa11.72□□□□□ -0.53
VEGFA-201ENST00000230480 E2F6O75461 281 aa11.72□□□□□ -0.53
VEGFA-201ENST00000230480 LY6G6DO95868 133 aa11.72□□□□□ -0.53
VEGFA-201ENST00000230480 PTHP01270 115 aa11.72□□□□□ -0.53
VEGFA-201ENST00000230480 IGHV3-13P01766 116 aa11.72□□□□□ -0.53
VEGFA-201ENST00000230480 INHBBP09529 407 aa11.72□□□□□ -0.53
VEGFA-201ENST00000230480 NAT2P11245 290 aa11.72□□□□□ -0.53
VEGFA-201ENST00000230480 CCNOP22674 350 aa11.72□□□□□ -0.53
VEGFA-201ENST00000230480 COL8A2P25067 703 aa11.72□□□□□ -0.53
VEGFA-201ENST00000230480 OTX1P32242 354 aaPredicted RBP11.72□□□□□ -0.53
VEGFA-201ENST00000230480 GDI2P50395 445 aaKnown RBP11.72□□□□□ -0.53
VEGFA-201ENST00000230480 CRISP1P54107 249 aa11.72□□□□□ -0.53
VEGFA-201ENST00000230480 PPP2R2BQ00005 443 aa11.72□□□□□ -0.53
VEGFA-201ENST00000230480 SCRN3Q0VDG4 424 aa11.72□□□□□ -0.53
VEGFA-201ENST00000230480 RAB35Q15286 201 aa11.72□□□□□ -0.53
VEGFA-201ENST00000230480 OR1J2Q8NGS2 313 aa11.72□□□□□ -0.53
VEGFA-201ENST00000230480 OR1J1Q8NGS3 322 aa11.72□□□□□ -0.53
VEGFA-201ENST00000230480 KLF14Q8TD94 323 aaPredicted RBP11.72□□□□□ -0.53
VEGFA-201ENST00000230480 ST7LQ8TDW4 575 aa11.72□□□□□ -0.53
VEGFA-201ENST00000230480 REG4Q9BYZ8 158 aa11.72□□□□□ -0.53
VEGFA-201ENST00000230480 KCNN2Q9H2S1 579 aa11.72□□□□□ -0.53
VEGFA-201ENST00000230480 TPK1Q9H3S4 243 aa11.72□□□□□ -0.53
VEGFA-201ENST00000230480 DUSP13Q9UII6 198 aa11.72□□□□□ -0.53
VEGFA-201ENST00000230480 HIVEP2P31629 2446 aa11.72□□□□□ -0.53
VEGFA-201ENST00000230480 ARHGAP32A7KAX9 2087 aa11.71□□□□□ -0.53
VEGFA-201ENST00000230480 TANC2Q9HCD6 1990 aa11.71□□□□□ -0.53
VEGFA-201ENST00000230480 CCDC182A6NF36 153 aa11.71□□□□□ -0.53
VEGFA-201ENST00000230480 PRR32B1ATL7 298 aa11.71□□□□□ -0.53
VEGFA-201ENST00000230480 M0R129 80 aa11.71□□□□□ -0.53
VEGFA-201ENST00000230480 FASP25445 335 aa11.71□□□□□ -0.53
VEGFA-201ENST00000230480 POU1F1P28069 291 aa11.71□□□□□ -0.53
VEGFA-201ENST00000230480 RAD52P43351 418 aa11.71□□□□□ -0.53
VEGFA-201ENST00000230480 MAGEB1P43366 347 aa11.71□□□□□ -0.53
VEGFA-201ENST00000230480 HTR5AP47898 357 aa11.71□□□□□ -0.53
VEGFA-201ENST00000230480 CENPAP49450 140 aa11.71□□□□□ -0.53
VEGFA-201ENST00000230480 SNRPD2P62316 118 aaKnown RBP11.71□□□□□ -0.53
VEGFA-201ENST00000230480 GALK2Q01415 458 aa11.71□□□□□ -0.53
VEGFA-201ENST00000230480 GLO1Q04760 184 aa11.71□□□□□ -0.53
VEGFA-201ENST00000230480 PSG7Q13046 419 aa11.71□□□□□ -0.53
VEGFA-201ENST00000230480 MED21Q13503 144 aa11.71□□□□□ -0.53
VEGFA-201ENST00000230480 PTGES3Q15185 160 aaKnown RBP11.71□□□□□ -0.53
VEGFA-201ENST00000230480 TEX30Q5JUR7 227 aa11.71□□□□□ -0.53
VEGFA-201ENST00000230480 MBNL2Q5VZF2 373 aaKnown RBP11.71□□□□□ -0.53
VEGFA-201ENST00000230480 RGS7BPQ6MZT1 257 aaPredicted RBP11.71□□□□□ -0.53
VEGFA-201ENST00000230480 SLC27A4Q6P1M0 643 aa11.71□□□□□ -0.53
VEGFA-201ENST00000230480 Q6ZR03 302 aa11.71□□□□□ -0.53
VEGFA-201ENST00000230480 BCDIN3DQ7Z5W3 292 aaKnown RBP11.71□□□□□ -0.53
VEGFA-201ENST00000230480 CPOQ8IVL8 374 aa11.71□□□□□ -0.53
VEGFA-201ENST00000230480 TIGD4Q8IY51 512 aa11.71□□□□□ -0.53
VEGFA-201ENST00000230480 OR2T4Q8NH00 348 aa11.71□□□□□ -0.53
VEGFA-201ENST00000230480 SYNPRQ8TBG9 265 aa11.71□□□□□ -0.53
VEGFA-201ENST00000230480 IPCEF1Q8WWN9 437 aaPredicted RBP11.71□□□□□ -0.53
VEGFA-201ENST00000230480 YIPF5Q969M3 257 aa11.71□□□□□ -0.53
VEGFA-201ENST00000230480 COQ7Q99807 217 aa11.71□□□□□ -0.53
VEGFA-201ENST00000230480 VRK1Q99986 396 aaPredicted RBP11.71□□□□□ -0.53
VEGFA-201ENST00000230480 BCL2L14Q9BZR8 327 aa11.71□□□□□ -0.53
VEGFA-201ENST00000230480 TBCCD1Q9NVR7 557 aa11.71□□□□□ -0.53
VEGFA-201ENST00000230480 PLEK2Q9NYT0 353 aa11.71□□□□□ -0.53
VEGFA-201ENST00000230480 TAAR3PQ9P1P4 343 aa11.71□□□□□ -0.53
VEGFA-201ENST00000230480 OAZ3Q9UMX2 235 aa11.71□□□□□ -0.53
VEGFA-201ENST00000230480 KLHDC2Q9Y2U9 406 aa11.71□□□□□ -0.53
VEGFA-201ENST00000230480 PMF1-BGLAPU3KQ54 211 aa11.71□□□□□ -0.53
VEGFA-201ENST00000230480 JMJD1CQ15652 2540 aa11.71□□□□□ -0.53
VEGFA-201ENST00000230480 ZSCAN5BA6NJL1 495 aa11.7□□□□□ -0.54
VEGFA-201ENST00000230480 ZAR1LA6NP61 321 aa11.7□□□□□ -0.54
VEGFA-201ENST00000230480 G3V2T6 193 aa11.7□□□□□ -0.54
VEGFA-201ENST00000230480 H3BN98 237 aa11.7□□□□□ -0.54
VEGFA-201ENST00000230480 CASQ2O14958 399 aaPredicted RBP11.7□□□□□ -0.54
VEGFA-201ENST00000230480 SMAD7O15105 426 aaKnown RBP11.7□□□□□ -0.54
VEGFA-201ENST00000230480 PRKYO43930 277 aa11.7□□□□□ -0.54
VEGFA-201ENST00000230480 LILRA1O75019 489 aa11.7□□□□□ -0.54
VEGFA-201ENST00000230480 RP2O75695 350 aa11.7□□□□□ -0.54
VEGFA-201ENST00000230480 LCKP06239 509 aa11.7□□□□□ -0.54
VEGFA-201ENST00000230480 ACSM4P0C7M7 580 aa11.7□□□□□ -0.54
VEGFA-201ENST00000230480 PPP1CBP62140 327 aa11.7□□□□□ -0.54
VEGFA-201ENST00000230480 KRTAP21-3Q3LHN1 58 aa11.7□□□□□ -0.54
VEGFA-201ENST00000230480 SLX4IPQ5VYV7 408 aa11.7□□□□□ -0.54
VEGFA-201ENST00000230480 C12orf73Q69YU5 71 aa11.7□□□□□ -0.54
VEGFA-201ENST00000230480 PLBD1Q6P4A8 553 aa11.7□□□□□ -0.54
VEGFA-201ENST00000230480 DNM1P34Q6PK57 102 aa11.7□□□□□ -0.54
VEGFA-201ENST00000230480 ATG16L2Q8NAA4 619 aa11.7□□□□□ -0.54
VEGFA-201ENST00000230480 GJC3Q8NFK1 279 aa11.7□□□□□ -0.54
VEGFA-201ENST00000230480 ABHD4Q8TB40 342 aa11.7□□□□□ -0.54
VEGFA-201ENST00000230480 TEX47Q8TBZ9 253 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms