RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 ST3GAL2Q16842 350 aa16.97■□□□□ 0.31
YBX3-201ENST00000228251 CREB3L2Q70SY1 520 aa16.97■□□□□ 0.31
YBX3-201ENST00000228251 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.97■□□□□ 0.31
YBX3-201ENST00000228251 PIAS4Q8N2W9 510 aaPredicted RBP16.97■□□□□ 0.31
YBX3-201ENST00000228251 ZFAND1Q8TCF1 268 aa16.97■□□□□ 0.31
YBX3-201ENST00000228251 TMEM54Q969K7 222 aa16.97■□□□□ 0.31
YBX3-201ENST00000228251 NKX3-1Q99801 234 aaPredicted RBP16.97■□□□□ 0.31
YBX3-201ENST00000228251 EMC3Q9P0I2 261 aa16.97■□□□□ 0.31
YBX3-201ENST00000228251 PCDHGA5Q9Y5G8 931 aa16.97■□□□□ 0.31
YBX3-201ENST00000228251 A0A1W2PNU3 283 aaPredicted RBP16.96■□□□□ 0.31
YBX3-201ENST00000228251 ZNF878C9JN71 531 aa16.96■□□□□ 0.31
YBX3-201ENST00000228251 EIF1BO60739 113 aaKnown RBP16.96■□□□□ 0.31
YBX3-201ENST00000228251 PEX14O75381 377 aa16.96■□□□□ 0.31
YBX3-201ENST00000228251 CBR3O75828 277 aa16.96■□□□□ 0.31
YBX3-201ENST00000228251 ALDOBP05062 364 aa16.96■□□□□ 0.31
YBX3-201ENST00000228251 CD59P13987 128 aa16.96■□□□□ 0.31
YBX3-201ENST00000228251 EIF1AXP47813 144 aaKnown RBP16.96■□□□□ 0.31
YBX3-201ENST00000228251 MECP2P51608 486 aaKnown RBP16.96■□□□□ 0.31
YBX3-201ENST00000228251 GLYATL3Q5SZD4 288 aa16.96■□□□□ 0.31
YBX3-201ENST00000228251 C10orf128Q5T292 105 aa16.96■□□□□ 0.31
YBX3-201ENST00000228251 CARD17Q5XLA6 110 aa16.96■□□□□ 0.31
YBX3-201ENST00000228251 SFRP4Q6FHJ7 346 aaPredicted RBP16.96■□□□□ 0.31
YBX3-201ENST00000228251 ZNF813Q6ZN06 617 aa16.96■□□□□ 0.31
YBX3-201ENST00000228251 NKAIN3Q8N8D7 197 aa16.96■□□□□ 0.31
YBX3-201ENST00000228251 GIMAP1Q8WWP7 306 aa16.96■□□□□ 0.31
YBX3-201ENST00000228251 TAAR9Q96RI9 348 aa16.96■□□□□ 0.31
YBX3-201ENST00000228251 MED28Q9H204 178 aa16.96■□□□□ 0.31
YBX3-201ENST00000228251 MOB1AQ9H8S9 216 aa16.96■□□□□ 0.31
YBX3-201ENST00000228251 CGGBP1Q9UFW8 167 aaPredicted RBP16.96■□□□□ 0.31
YBX3-201ENST00000228251 A0A0G2JMM0 328 aa16.95■□□□□ 0.3
YBX3-201ENST00000228251 A0A1W2PPB8 328 aa16.95■□□□□ 0.3
YBX3-201ENST00000228251 A0A1W2PRS3 328 aa16.95■□□□□ 0.3
YBX3-201ENST00000228251 KIR3DP1A8MWS1 328 aa16.95■□□□□ 0.3
YBX3-201ENST00000228251 VAMP5O95183 116 aa16.95■□□□□ 0.3
YBX3-201ENST00000228251 ICAM2P13598 275 aa16.95■□□□□ 0.3
YBX3-201ENST00000228251 STOMP27105 288 aa16.95■□□□□ 0.3
YBX3-201ENST00000228251 DNASE1L1P49184 302 aa16.95■□□□□ 0.3
YBX3-201ENST00000228251 CLDN17P56750 224 aa16.95■□□□□ 0.3
YBX3-201ENST00000228251 RAC1P63000 192 aa16.95■□□□□ 0.3
YBX3-201ENST00000228251 SSPNQ14714 243 aa16.95■□□□□ 0.3
YBX3-201ENST00000228251 CDCP2Q5VXM1 449 aa16.95■□□□□ 0.3
YBX3-201ENST00000228251 RAET1LQ5VY80 246 aa16.95■□□□□ 0.3
YBX3-201ENST00000228251 RAB11FIP2Q7L804 512 aa16.95■□□□□ 0.3
YBX3-201ENST00000228251 TMEM123Q8N131 208 aa16.95■□□□□ 0.3
YBX3-201ENST00000228251 MS4A3Q96HJ5 214 aa16.95■□□□□ 0.3
YBX3-201ENST00000228251 SEC61A2Q9H9S3 476 aa16.95■□□□□ 0.3
YBX3-201ENST00000228251 DIABLOQ9NR28 239 aa16.95■□□□□ 0.3
YBX3-201ENST00000228251 GPR179Q6PRD1 2367 aa16.95■□□□□ 0.3
YBX3-201ENST00000228251 A0A0J9YW62 118 aa16.94■□□□□ 0.3
YBX3-201ENST00000228251 ZNF726A6NNF4 738 aa16.94■□□□□ 0.3
YBX3-201ENST00000228251 SULT1A3P0DMM9 295 aa16.94■□□□□ 0.3
YBX3-201ENST00000228251 SULT1A4P0DMN0 295 aa16.94■□□□□ 0.3
YBX3-201ENST00000228251 TCN2P20062 427 aa16.94■□□□□ 0.3
YBX3-201ENST00000228251 SDHBP21912 280 aa16.94■□□□□ 0.3
YBX3-201ENST00000228251 ANOS1P23352 680 aa16.94■□□□□ 0.3
YBX3-201ENST00000228251 OTX2P32243 289 aa16.94■□□□□ 0.3
YBX3-201ENST00000228251 SUCLG1P53597 346 aaKnown RBP16.94■□□□□ 0.3
YBX3-201ENST00000228251 PHYHD1Q5SRE7 291 aa16.94■□□□□ 0.3
YBX3-201ENST00000228251 LAMTOR1Q6IAA8 161 aa16.94■□□□□ 0.3
YBX3-201ENST00000228251 KLHL24Q6TFL4 600 aa16.94■□□□□ 0.3
YBX3-201ENST00000228251 FGD2Q7Z6J4 655 aa16.94■□□□□ 0.3
YBX3-201ENST00000228251 ZIC4Q8N9L1 334 aa16.94■□□□□ 0.3
YBX3-201ENST00000228251 PTX4Q96A99 478 aa16.94■□□□□ 0.3
YBX3-201ENST00000228251 ADAT3Q96EY9 351 aaPredicted RBP16.94■□□□□ 0.3
YBX3-201ENST00000228251 LIN37Q96GY3 246 aaPredicted RBP16.94■□□□□ 0.3
YBX3-201ENST00000228251 STRADBQ9C0K7 418 aa16.94■□□□□ 0.3
YBX3-201ENST00000228251 GLTPQ9NZD2 209 aa16.94■□□□□ 0.3
YBX3-201ENST00000228251 DKKL1Q9UK85 242 aa16.94■□□□□ 0.3
YBX3-201ENST00000228251 FLVCR2Q9UPI3 526 aa16.94■□□□□ 0.3
YBX3-201ENST00000228251 C9orf172C9J069 976 aa16.94■□□□□ 0.3
YBX3-201ENST00000228251 CTSSP25774 331 aa16.94■□□□□ 0.3
YBX3-201ENST00000228251 HSD11B1P28845 292 aa16.94■□□□□ 0.3
YBX3-201ENST00000228251 SRD5A2P31213 254 aa16.94■□□□□ 0.3
YBX3-201ENST00000228251 CLDN6P56747 220 aa16.94■□□□□ 0.3
YBX3-201ENST00000228251 GABREP78334 506 aa16.94■□□□□ 0.3
YBX3-201ENST00000228251 SPOCK1Q08629 439 aa16.94■□□□□ 0.3
YBX3-201ENST00000228251 B3GNTL1Q67FW5 361 aaPredicted RBP16.94■□□□□ 0.3
YBX3-201ENST00000228251 ADGRE4PQ86SQ3 457 aa16.94■□□□□ 0.3
YBX3-201ENST00000228251 OR1J2Q8NGS2 313 aa16.94■□□□□ 0.3
YBX3-201ENST00000228251 GPX8Q8TED1 209 aa16.94■□□□□ 0.3
YBX3-201ENST00000228251 PSMF1Q92530 271 aa16.94■□□□□ 0.3
YBX3-201ENST00000228251 ZNF385AQ96PM9 386 aaKnown RBP16.94■□□□□ 0.3
YBX3-201ENST00000228251 UCN2Q96RP3 112 aa16.94■□□□□ 0.3
YBX3-201ENST00000228251 TMEM246Q9BRR3 403 aa16.94■□□□□ 0.3
YBX3-201ENST00000228251 ASH2LQ9UBL3 628 aa16.94■□□□□ 0.3
YBX3-201ENST00000228251 FARSAQ9Y285 508 aaKnown RBP16.94■□□□□ 0.3
YBX3-201ENST00000228251 TRAV18A0A075B6X5 111 aa16.93■□□□□ 0.3
YBX3-201ENST00000228251 A0A1B0GUH1 482 aa16.93■□□□□ 0.3
YBX3-201ENST00000228251 LRRC3CA6NJW4 275 aa16.93■□□□□ 0.3
YBX3-201ENST00000228251 CDX4O14627 284 aaPredicted RBP16.93■□□□□ 0.3
YBX3-201ENST00000228251 DNPH1O43598 174 aa16.93■□□□□ 0.3
YBX3-201ENST00000228251 TGM6O95932 706 aa16.93■□□□□ 0.3
YBX3-201ENST00000228251 HPXP02790 462 aa16.93■□□□□ 0.3
YBX3-201ENST00000228251 CXCL3P19876 107 aa16.93■□□□□ 0.3
YBX3-201ENST00000228251 CCL1P22362 96 aa16.93■□□□□ 0.3
YBX3-201ENST00000228251 LSM6P62312 80 aaKnown RBP16.93■□□□□ 0.3
YBX3-201ENST00000228251 SSBP1Q04837 148 aaKnown RBP16.93■□□□□ 0.3
YBX3-201ENST00000228251 LINC00303Q3SY05 128 aa16.93■□□□□ 0.3
YBX3-201ENST00000228251 BEST3Q8N1M1 668 aa16.93■□□□□ 0.3
YBX3-201ENST00000228251 ASCC1Q8N9N2 400 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms