RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 PNRC2Q9NPJ4 139 aaKnown RBP10.86□□□□□ -0.67
LSM5-201ENST00000223084 HINT3Q9NQE9 182 aaKnown RBP10.86□□□□□ -0.67
LSM5-201ENST00000223084 KRT84Q9NSB2 600 aa10.86□□□□□ -0.67
LSM5-201ENST00000223084 TVP23BQ9NYZ1 205 aa10.86□□□□□ -0.67
LSM5-201ENST00000223084 OAZ3Q9UMX2 235 aa10.86□□□□□ -0.67
LSM5-201ENST00000223084 STARD10Q9Y365 291 aa10.86□□□□□ -0.67
LSM5-201ENST00000223084 COMMD3-BMI1R4GMX3 469 aa10.86□□□□□ -0.67
LSM5-201ENST00000223084 IGLV3-9A0A075B6K5 115 aa10.85□□□□□ -0.67
LSM5-201ENST00000223084 PRR23D1E9PI22 279 aaPredicted RBP10.85□□□□□ -0.67
LSM5-201ENST00000223084 ZNF593O00488 134 aaPredicted RBP10.85□□□□□ -0.67
LSM5-201ENST00000223084 ICMTO60725 284 aa10.85□□□□□ -0.67
LSM5-201ENST00000223084 SPARCP09486 303 aa10.85□□□□□ -0.67
LSM5-201ENST00000223084 PRR23D2P0DMB1 279 aaPredicted RBP10.85□□□□□ -0.67
LSM5-201ENST00000223084 ENTPD1P49961 510 aa10.85□□□□□ -0.67
LSM5-201ENST00000223084 SELENOVP59797 346 aa10.85□□□□□ -0.67
LSM5-201ENST00000223084 PTGES3Q15185 160 aaKnown RBP10.85□□□□□ -0.67
LSM5-201ENST00000223084 NKPD1Q17RQ9 610 aa10.85□□□□□ -0.67
LSM5-201ENST00000223084 KDM4DQ6B0I6 523 aa10.85□□□□□ -0.67
LSM5-201ENST00000223084 ARL9Q6T311 187 aa10.85□□□□□ -0.67
LSM5-201ENST00000223084 CLEC2AQ6UVW9 174 aa10.85□□□□□ -0.67
LSM5-201ENST00000223084 CPOQ8IVL8 374 aa10.85□□□□□ -0.67
LSM5-201ENST00000223084 PARP8Q8N3A8 854 aa10.85□□□□□ -0.67
LSM5-201ENST00000223084 BBS1Q8NFJ9 593 aa10.85□□□□□ -0.67
LSM5-201ENST00000223084 OR10S1Q8NGN2 331 aa10.85□□□□□ -0.67
LSM5-201ENST00000223084 KLF14Q8TD94 323 aaPredicted RBP10.85□□□□□ -0.67
LSM5-201ENST00000223084 PLEKHA8Q96JA3 519 aa10.85□□□□□ -0.67
LSM5-201ENST00000223084 RAB3IPQ96QF0 476 aaPredicted RBP10.85□□□□□ -0.67
LSM5-201ENST00000223084 COQ7Q99807 217 aa10.85□□□□□ -0.67
LSM5-201ENST00000223084 RHNO1Q9BSD3 238 aa10.85□□□□□ -0.67
LSM5-201ENST00000223084 REG4Q9BYZ8 158 aa10.85□□□□□ -0.67
LSM5-201ENST00000223084 HDHD2Q9H0R4 259 aa10.85□□□□□ -0.67
LSM5-201ENST00000223084 TMEFF2Q9UIK5 374 aaPredicted RBP10.85□□□□□ -0.67
LSM5-201ENST00000223084 TLN2Q9Y4G6 2542 aa10.85□□□□□ -0.67
LSM5-201ENST00000223084 ABCA1O95477 2261 aa10.84□□□□□ -0.67
LSM5-201ENST00000223084 LYNX1G3V0Z9 82 aa10.84□□□□□ -0.67
LSM5-201ENST00000223084 M0R129 80 aa10.84□□□□□ -0.67
LSM5-201ENST00000223084 LYNX1P0DP58 116 aa10.84□□□□□ -0.67
LSM5-201ENST00000223084 FOSL1P15407 271 aa10.84□□□□□ -0.67
LSM5-201ENST00000223084 PAICSP22234 425 aaKnown RBP10.84□□□□□ -0.67
LSM5-201ENST00000223084 GSTT1P30711 240 aa10.84□□□□□ -0.67
LSM5-201ENST00000223084 GCH1P30793 250 aa10.84□□□□□ -0.67
LSM5-201ENST00000223084 ESRRGP62508 458 aa10.84□□□□□ -0.67
LSM5-201ENST00000223084 SNAPC1Q16533 368 aa10.84□□□□□ -0.67
LSM5-201ENST00000223084 KRTAP27-1Q3LI81 207 aa10.84□□□□□ -0.67
LSM5-201ENST00000223084 KLHL12Q53G59 568 aa10.84□□□□□ -0.67
LSM5-201ENST00000223084 MBNL2Q5VZF2 373 aaKnown RBP10.84□□□□□ -0.67
LSM5-201ENST00000223084 ZFP1Q6P2D0 407 aa10.84□□□□□ -0.67
LSM5-201ENST00000223084 UNQ6126/PRO20091Q6UXV3 157 aa10.84□□□□□ -0.67
LSM5-201ENST00000223084 Q71RC1 249 aaPredicted RBP10.84□□□□□ -0.67
LSM5-201ENST00000223084 SPATC1Q76KD6 591 aa10.84□□□□□ -0.67
LSM5-201ENST00000223084 DCXRQ7Z4W1 244 aa10.84□□□□□ -0.67
LSM5-201ENST00000223084 NAA40Q86UY6 237 aa10.84□□□□□ -0.67
LSM5-201ENST00000223084 ERI1Q8IV48 349 aaKnown RBP10.84□□□□□ -0.67
LSM5-201ENST00000223084 NEU4Q8WWR8 484 aaPredicted RBP10.84□□□□□ -0.67
LSM5-201ENST00000223084 FAM168AQ92567 244 aa10.84□□□□□ -0.67
LSM5-201ENST00000223084 ZMYND19Q96E35 227 aaPredicted RBP10.84□□□□□ -0.67
LSM5-201ENST00000223084 CIB1Q99828 191 aa10.84□□□□□ -0.67
LSM5-201ENST00000223084 ATF6BQ99941 703 aa10.84□□□□□ -0.67
LSM5-201ENST00000223084 TBCCD1Q9NVR7 557 aa10.84□□□□□ -0.67
LSM5-201ENST00000223084 SLCO1C1Q9NYB5 712 aa10.84□□□□□ -0.67
LSM5-201ENST00000223084 PTTG3PQ9NZH4 202 aa10.84□□□□□ -0.67
LSM5-201ENST00000223084 ATPIF1Q9UII2 106 aa10.84□□□□□ -0.67
LSM5-201ENST00000223084 KCNG2Q9UJ96 466 aa10.84□□□□□ -0.67
LSM5-201ENST00000223084 FBXO9Q9UK97 447 aaPredicted RBP10.84□□□□□ -0.67
LSM5-201ENST00000223084 ZANQ9Y493 2812 aa10.83□□□□□ -0.68
LSM5-201ENST00000223084 F5H5K5 113 aa10.83□□□□□ -0.68
LSM5-201ENST00000223084 PRKYO43930 277 aa10.83□□□□□ -0.68
LSM5-201ENST00000223084 NCR1O76036 304 aa10.83□□□□□ -0.68
LSM5-201ENST00000223084 GLCEO94923 617 aa10.83□□□□□ -0.68
LSM5-201ENST00000223084 IGHV3-13P01766 116 aa10.83□□□□□ -0.68
LSM5-201ENST00000223084 HPXP02790 462 aa10.83□□□□□ -0.68
LSM5-201ENST00000223084 ERCC1P07992 297 aaPredicted RBP10.83□□□□□ -0.68
LSM5-201ENST00000223084 ACSM4P0C7M7 580 aa10.83□□□□□ -0.68
LSM5-201ENST00000223084 DAOP14920 347 aa10.83□□□□□ -0.68
LSM5-201ENST00000223084 IGFBP5P24593 272 aa10.83□□□□□ -0.68
LSM5-201ENST00000223084 POLR2IP36954 125 aaKnown RBP10.83□□□□□ -0.68
LSM5-201ENST00000223084 MAGEB1P43366 347 aa10.83□□□□□ -0.68
LSM5-201ENST00000223084 PDLIM4P50479 330 aa10.83□□□□□ -0.68
LSM5-201ENST00000223084 DSCR9P59020 149 aa10.83□□□□□ -0.68
LSM5-201ENST00000223084 PSG7Q13046 419 aa10.83□□□□□ -0.68
LSM5-201ENST00000223084 HLXQ14774 488 aaPredicted RBP10.83□□□□□ -0.68
LSM5-201ENST00000223084 CXXC5Q7LFL8 322 aaKnown RBP10.83□□□□□ -0.68
LSM5-201ENST00000223084 BCDIN3DQ7Z5W3 292 aaKnown RBP10.83□□□□□ -0.68
LSM5-201ENST00000223084 OR6N2Q8NGY6 317 aa10.83□□□□□ -0.68
LSM5-201ENST00000223084 C10orf105Q8TEF2 133 aa10.83□□□□□ -0.68
LSM5-201ENST00000223084 CMBLQ96DG6 245 aa10.83□□□□□ -0.68
LSM5-201ENST00000223084 DCLRE1CQ96SD1 692 aaKnown RBP10.83□□□□□ -0.68
LSM5-201ENST00000223084 INTS14Q96SY0 518 aa10.83□□□□□ -0.68
LSM5-201ENST00000223084 OSBPL10Q9BXB5 764 aa10.83□□□□□ -0.68
LSM5-201ENST00000223084 TEX12Q9BXU0 123 aa10.83□□□□□ -0.68
LSM5-201ENST00000223084 MS4A5Q9H3V2 200 aa10.83□□□□□ -0.68
LSM5-201ENST00000223084 S100A14Q9HCY8 104 aa10.83□□□□□ -0.68
LSM5-201ENST00000223084 CENPMQ9NSP4 180 aa10.83□□□□□ -0.68
LSM5-201ENST00000223084 GPR160Q9UJ42 338 aa10.83□□□□□ -0.68
LSM5-201ENST00000223084 ZAR1LA6NP61 321 aa10.82□□□□□ -0.68
LSM5-201ENST00000223084 C17orf100A8MU93 164 aa10.82□□□□□ -0.68
LSM5-201ENST00000223084 SPRY3O43610 288 aa10.82□□□□□ -0.68
LSM5-201ENST00000223084 SELENOFO60613 162 aa10.82□□□□□ -0.68
LSM5-201ENST00000223084 LY6G6DO95868 133 aa10.82□□□□□ -0.68
LSM5-201ENST00000223084 CSF3P09919 207 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms