RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 RHOUQ7L0Q8 258 aa14.9□□□□□ -0.02
MRPL28-201ENST00000199706 ZNF786Q8N393 782 aa14.9□□□□□ -0.02
MRPL28-201ENST00000199706 IQCF1Q8N6M8 205 aa14.9□□□□□ -0.02
MRPL28-201ENST00000199706 OR9Q1Q8NGQ5 310 aa14.9□□□□□ -0.02
MRPL28-201ENST00000199706 SLC25A40Q8TBP6 338 aa14.9□□□□□ -0.02
MRPL28-201ENST00000199706 APOBEC3DQ96AK3 386 aaPredicted RBP14.9□□□□□ -0.02
MRPL28-201ENST00000199706 ATF6BQ99941 703 aa14.9□□□□□ -0.02
MRPL28-201ENST00000199706 CDADC1Q9BWV3 514 aa14.9□□□□□ -0.02
MRPL28-201ENST00000199706 PRRG3Q9BZD7 231 aa14.9□□□□□ -0.02
MRPL28-201ENST00000199706 HINT3Q9NQE9 182 aaKnown RBP14.9□□□□□ -0.02
MRPL28-201ENST00000199706 C17orf100A8MU93 164 aa14.89□□□□□ -0.03
MRPL28-201ENST00000199706 NGFP01138 241 aa14.89□□□□□ -0.03
MRPL28-201ENST00000199706 OTX1P32242 354 aaPredicted RBP14.89□□□□□ -0.03
MRPL28-201ENST00000199706 DAPP51397 102 aa14.89□□□□□ -0.03
MRPL28-201ENST00000199706 CRISP1P54107 249 aa14.89□□□□□ -0.03
MRPL28-201ENST00000199706 LOXL1Q08397 574 aaPredicted RBP14.89□□□□□ -0.03
MRPL28-201ENST00000199706 OR5L1Q8NGL2 311 aa14.89□□□□□ -0.03
MRPL28-201ENST00000199706 PIMREGQ9BSJ6 248 aa14.89□□□□□ -0.03
MRPL28-201ENST00000199706 OR2J1Q9GZK6 312 aa14.89□□□□□ -0.03
MRPL28-201ENST00000199706 OR51B6Q9H340 312 aa14.89□□□□□ -0.03
MRPL28-201ENST00000199706 TAAR3PQ9P1P4 343 aa14.89□□□□□ -0.03
MRPL28-201ENST00000199706 FZR1Q9UM11 496 aa14.89□□□□□ -0.03
MRPL28-201ENST00000199706 ZFHX3Q15911 3703 aa14.88□□□□□ -0.03
MRPL28-201ENST00000199706 RNF223E7ERA6 249 aa14.88□□□□□ -0.03
MRPL28-201ENST00000199706 GLCEO94923 617 aa14.88□□□□□ -0.03
MRPL28-201ENST00000199706 CLPTM1O96005 669 aa14.88□□□□□ -0.03
MRPL28-201ENST00000199706 DAOP14920 347 aa14.88□□□□□ -0.03
MRPL28-201ENST00000199706 ZNF23P17027 643 aa14.88□□□□□ -0.03
MRPL28-201ENST00000199706 KITLGP21583 273 aa14.88□□□□□ -0.03
MRPL28-201ENST00000199706 POU1F1P28069 291 aa14.88□□□□□ -0.03
MRPL28-201ENST00000199706 ALDH3B1P43353 468 aa14.88□□□□□ -0.03
MRPL28-201ENST00000199706 MMP15P51511 669 aa14.88□□□□□ -0.03
MRPL28-201ENST00000199706 SLC35D3Q5M8T2 416 aa14.88□□□□□ -0.03
MRPL28-201ENST00000199706 CORO6Q6QEF8 472 aa14.88□□□□□ -0.03
MRPL28-201ENST00000199706 FBXW12Q6X9E4 464 aa14.88□□□□□ -0.03
MRPL28-201ENST00000199706 UBASH3BQ8TF42 649 aa14.88□□□□□ -0.03
MRPL28-201ENST00000199706 ZNRF4Q8WWF5 429 aa14.88□□□□□ -0.03
MRPL28-201ENST00000199706 LRTOMTQ8WZ04 291 aa14.88□□□□□ -0.03
MRPL28-201ENST00000199706 PTP4A1Q93096 173 aa14.88□□□□□ -0.03
MRPL28-201ENST00000199706 MAP6Q96JE9 813 aa14.88□□□□□ -0.03
MRPL28-201ENST00000199706 RAB3IPQ96QF0 476 aaPredicted RBP14.88□□□□□ -0.03
MRPL28-201ENST00000199706 DIRC2Q96SL1 478 aa14.88□□□□□ -0.03
MRPL28-201ENST00000199706 PITX2Q99697 317 aa14.88□□□□□ -0.03
MRPL28-201ENST00000199706 C1QTNF5Q9BXJ0 243 aa14.88□□□□□ -0.03
MRPL28-201ENST00000199706 KRT84Q9NSB2 600 aa14.88□□□□□ -0.03
MRPL28-201ENST00000199706 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.88□□□□□ -0.03
MRPL28-201ENST00000199706 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.88□□□□□ -0.032e-7■■□□□ 14.2
MRPL28-201ENST00000199706 YLPM1P49750 1951 aaKnown RBP14.87□□□□□ -0.03
MRPL28-201ENST00000199706 PLSCR5A0PG75 271 aa14.87□□□□□ -0.03
MRPL28-201ENST00000199706 PRR23D1E9PI22 279 aaPredicted RBP14.87□□□□□ -0.03
MRPL28-201ENST00000199706 LY6HO94772 140 aa14.87□□□□□ -0.03
MRPL28-201ENST00000199706 PRR23D2P0DMB1 279 aaPredicted RBP14.87□□□□□ -0.03
MRPL28-201ENST00000199706 RAC2P15153 192 aa14.87□□□□□ -0.03
MRPL28-201ENST00000199706 NR4A2P43354 598 aa14.87□□□□□ -0.03
MRPL28-201ENST00000199706 PPP2R2BQ00005 443 aa14.87□□□□□ -0.03
MRPL28-201ENST00000199706 KPNB1Q14974 876 aaKnown RBP14.87□□□□□ -0.03
MRPL28-201ENST00000199706 MAD2L1BPQ15013 274 aaPredicted RBP14.87□□□□□ -0.03
MRPL28-201ENST00000199706 RSPO1Q2MKA7 263 aaPredicted RBP14.87□□□□□ -0.03
MRPL28-201ENST00000199706 OTPQ5XKR4 325 aa14.87□□□□□ -0.03
MRPL28-201ENST00000199706 TMEM154Q6P9G4 183 aa14.87□□□□□ -0.03
MRPL28-201ENST00000199706 CLEC9AQ6UXN8 241 aa14.87□□□□□ -0.03
MRPL28-201ENST00000199706 LINC00346Q8IVM7 164 aa14.87□□□□□ -0.03
MRPL28-201ENST00000199706 ZCCHC24Q8N2G6 241 aaKnown RBP14.87□□□□□ -0.03
MRPL28-201ENST00000199706 ICA1LQ8NDH6 482 aa14.87□□□□□ -0.03
MRPL28-201ENST00000199706 OR6K6Q8NGW6 343 aa14.87□□□□□ -0.03
MRPL28-201ENST00000199706 ST7LQ8TDW4 575 aa14.87□□□□□ -0.03
MRPL28-201ENST00000199706 SLC7A6Q92536 515 aa14.87□□□□□ -0.03
MRPL28-201ENST00000199706 SPTSSAQ969W0 71 aa14.87□□□□□ -0.03
MRPL28-201ENST00000199706 PLEKHA8Q96JA3 519 aa14.87□□□□□ -0.03
MRPL28-201ENST00000199706 HCAR1Q9BXC0 346 aa14.87□□□□□ -0.03
MRPL28-201ENST00000199706 WDR76Q9H967 626 aa14.87□□□□□ -0.03
MRPL28-201ENST00000199706 ZDHHC8Q9ULC8 765 aa14.87□□□□□ -0.03
MRPL28-201ENST00000199706 GRIP1Q9Y3R0 1128 aa14.87□□□□□ -0.03
MRPL28-201ENST00000199706 NAV3Q8IVL0 2385 aa14.87□□□□□ -0.03
MRPL28-201ENST00000199706 H3BNX3 289 aa14.86□□□□□ -0.03
MRPL28-201ENST00000199706 GYPBP06028 91 aa14.86□□□□□ -0.03
MRPL28-201ENST00000199706 DBHP09172 617 aa14.86□□□□□ -0.03
MRPL28-201ENST00000199706 ACSM4P0C7M7 580 aa14.86□□□□□ -0.03
MRPL28-201ENST00000199706 NAT2P11245 290 aa14.86□□□□□ -0.03
MRPL28-201ENST00000199706 ACHEP22303 614 aa14.86□□□□□ -0.03
MRPL28-201ENST00000199706 GSTT1P30711 240 aa14.86□□□□□ -0.03
MRPL28-201ENST00000199706 MPV17P39210 176 aa14.86□□□□□ -0.03
MRPL28-201ENST00000199706 RIPPLY3P57055 190 aa14.86□□□□□ -0.03
MRPL28-201ENST00000199706 RIN1Q13671 783 aa14.86□□□□□ -0.03
MRPL28-201ENST00000199706 PTGES3Q15185 160 aaKnown RBP14.86□□□□□ -0.03
MRPL28-201ENST00000199706 TMEM255AQ5JRV8 349 aa14.86□□□□□ -0.03
MRPL28-201ENST00000199706 SPATA46Q5T0L3 261 aa14.86□□□□□ -0.03
MRPL28-201ENST00000199706 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.86□□□□□ -0.03
MRPL28-201ENST00000199706 ZNF454Q8N9F8 522 aa14.86□□□□□ -0.03
MRPL28-201ENST00000199706 OR51L1Q8NGJ5 315 aa14.86□□□□□ -0.03
MRPL28-201ENST00000199706 OR10S1Q8NGN2 331 aa14.86□□□□□ -0.03
MRPL28-201ENST00000199706 RDH5Q92781 318 aa14.86□□□□□ -0.03
MRPL28-201ENST00000199706 HAVCR1Q96D42 359 aa14.86□□□□□ -0.03
MRPL28-201ENST00000199706 INTS14Q96SY0 518 aa14.86□□□□□ -0.03
MRPL28-201ENST00000199706 GABARAPL3Q9BY60 117 aa14.86□□□□□ -0.03
MRPL28-201ENST00000199706 TPK1Q9H3S4 243 aa14.86□□□□□ -0.03
MRPL28-201ENST00000199706 CHODLQ9H9P2 273 aa14.86□□□□□ -0.03
MRPL28-201ENST00000199706 OAZ3Q9UMX2 235 aa14.86□□□□□ -0.03
MRPL28-201ENST00000199706 TVP23AA6NH52 213 aa14.85□□□□□ -0.03
MRPL28-201ENST00000199706 FAM183AA6NL82 134 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms