RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 MTFP1Q9UDX5 166 aa7.35□□□□□ -1.23
VAMP3-201ENST00000054666 CGGBP1Q9UFW8 167 aaPredicted RBP7.35□□□□□ -1.23
VAMP3-201ENST00000054666 A0A0C4DFX4 3053 aa7.34□□□□□ -1.23
VAMP3-201ENST00000054666 A0A0A6YYH2 397 aa7.34□□□□□ -1.23
VAMP3-201ENST00000054666 A6NJ64 397 aa7.34□□□□□ -1.23
VAMP3-201ENST00000054666 ZNF814B7Z6K7 855 aa7.34□□□□□ -1.23
VAMP3-201ENST00000054666 G3V3Y1 287 aa7.34□□□□□ -1.23
VAMP3-201ENST00000054666 TGM6O95932 706 aa7.34□□□□□ -1.23
VAMP3-201ENST00000054666 TTRP02766 147 aa7.34□□□□□ -1.23
VAMP3-201ENST00000054666 P04436 131 aa7.34□□□□□ -1.23
VAMP3-201ENST00000054666 ALDOBP05062 364 aa7.34□□□□□ -1.23
VAMP3-201ENST00000054666 ERCC1P07992 297 aaPredicted RBP7.34□□□□□ -1.23
VAMP3-201ENST00000054666 CDAP32320 146 aa7.34□□□□□ -1.23
VAMP3-201ENST00000054666 PLA2G7Q13093 441 aa7.34□□□□□ -1.23
VAMP3-201ENST00000054666 RBMS2Q15434 407 aaKnown RBP7.34□□□□□ -1.23
VAMP3-201ENST00000054666 TCEAL6Q6IPX3 200 aa7.34□□□□□ -1.23
VAMP3-201ENST00000054666 SLC25A25Q6KCM7 469 aa7.34□□□□□ -1.23
VAMP3-201ENST00000054666 C6orf15Q6UXA7 325 aaPredicted RBP7.34□□□□□ -1.23
VAMP3-201ENST00000054666 NHLRC1Q6VVB1 395 aa7.34□□□□□ -1.23
VAMP3-201ENST00000054666 CFAP77Q6ZQR2 320 aa7.34□□□□□ -1.23
VAMP3-201ENST00000054666 RHOUQ7L0Q8 258 aa7.34□□□□□ -1.23
VAMP3-201ENST00000054666 ZNF627Q7L945 461 aa7.34□□□□□ -1.23
VAMP3-201ENST00000054666 OR11H7Q8NGC8 314 aa7.34□□□□□ -1.23
VAMP3-201ENST00000054666 OR51A2Q8NGJ7 313 aa7.34□□□□□ -1.23
VAMP3-201ENST00000054666 TCEAL3Q969E4 200 aa7.34□□□□□ -1.23
VAMP3-201ENST00000054666 GNRHR2Q96P88 292 aa7.34□□□□□ -1.23
VAMP3-201ENST00000054666 ARRDC1-AS1Q9H2J1 176 aa7.34□□□□□ -1.23
VAMP3-201ENST00000054666 BEX1Q9HBH7 125 aa7.34□□□□□ -1.23
VAMP3-201ENST00000054666 TCFL5Q9UL49 500 aa7.34□□□□□ -1.23
VAMP3-201ENST00000054666 HSPB11Q9Y547 144 aa7.34□□□□□ -1.23
VAMP3-201ENST00000054666 LHFPL6Q9Y693 200 aa7.34□□□□□ -1.23
VAMP3-201ENST00000054666 LOC390937A0A1W2PQ73 354 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 CIB4A0PJX0 185 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 OR2M5A3KFT3 312 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 SMLR1H3BR10 107 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 SULT1C2O00338 296 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 FABP7O15540 132 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 RAMP1O60894 148 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 CBR3O75828 277 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 KDM4BO94953 1096 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 AKAIN1P0CW23 69 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 GTF2F2P13984 249 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 GABRA1P14867 456 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 TCN2P20062 427 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 S100A1P23297 94 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 RGS19P49795 217 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 GRB2P62993 217 aaKnown RBP7.33□□□□□ -1.24
VAMP3-201ENST00000054666 ST3GAL2Q16842 350 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 LINC00303Q3SY05 128 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 FAAP20Q6NZ36 180 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 ZNF782Q6ZMW2 699 aaPredicted RBP7.33□□□□□ -1.24
VAMP3-201ENST00000054666 DNM1P46Q6ZS02 220 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 BEST4Q8NFU0 473 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 OR5D14Q8NGL3 314 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 FGGYQ96C11 551 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 NOX3Q9HBY0 568 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 SH2D2AQ9NP31 389 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 GLTPQ9NZD2 209 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 EML6Q6ZMW3 1958 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 LOC101059948A0A1B0GTJ6 334 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 METTL21EPA6NDL7 271 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 M0R296 226 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 CREBL2O60519 120 aaPredicted RBP7.33□□□□□ -1.24
VAMP3-201ENST00000054666 NDUFB6O95139 128 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 HPP00738 406 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 LPLP06858 475 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 SULT1A3P0DMM9 295 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 SULT1A4P0DMN0 295 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 RAB3AP20336 220 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 MSR1P21757 451 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 SDHBP21912 280 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 PRKXP51817 358 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 RPS18P62269 152 aaKnown RBP7.33□□□□□ -1.24
VAMP3-201ENST00000054666 RAC1P63000 192 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 POU4F3Q15319 338 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 KCNMB1Q16558 191 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 HIST3H3Q16695 136 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 CCDC92Q53HC0 331 aaPredicted RBP7.33□□□□□ -1.24
VAMP3-201ENST00000054666 TMEM255AQ5JRV8 349 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 C1orf100Q5SVJ3 147 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 RAB11FIP2Q7L804 512 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 ABHD12BQ7Z5M8 362 aaPredicted RBP7.33□□□□□ -1.24
VAMP3-201ENST00000054666 PPP1R32Q7Z5V6 425 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 ARMC10Q8N2F6 343 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 SLC22A24Q8N4F4 322 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 MEIOBQ8N635 442 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 ZNF283Q8N7M2 679 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 OR1M1Q8NGA1 313 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 OR4C16Q8NGL9 310 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 OR10S1Q8NGN2 331 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 CT55Q8WUE5 264 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 SLC25A28Q96A46 364 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 PTX4Q96A99 478 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 NKX3-1Q99801 234 aaPredicted RBP7.33□□□□□ -1.24
VAMP3-201ENST00000054666 GINS4Q9BRT9 223 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 SCPEP1Q9HB40 452 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 TMEM138Q9NPI0 162 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 FLVCR2Q9UPI3 526 aa7.33□□□□□ -1.24
VAMP3-201ENST00000054666 MEIKINA0A087WXM9 373 aa7.32□□□□□ -1.24
VAMP3-201ENST00000054666 UBE2QL1A1L167 161 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms