RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 KRTAP27-1Q3LI81 207 aa13.35□□□□□ -0.27
ERCC1-201ENST00000013807 DOK3Q7L591 496 aa13.35□□□□□ -0.27
ERCC1-201ENST00000013807 MUC20Q8N307 709 aaPredicted RBP13.35□□□□□ -0.27
ERCC1-201ENST00000013807 BPIFB2Q8N4F0 458 aa13.35□□□□□ -0.27
ERCC1-201ENST00000013807 GJC3Q8NFK1 279 aa13.35□□□□□ -0.27
ERCC1-201ENST00000013807 OR8G5Q8NG78 346 aa13.35□□□□□ -0.27
ERCC1-201ENST00000013807 SGMS2Q8NHU3 365 aa13.35□□□□□ -0.27
ERCC1-201ENST00000013807 SLC7A6Q92536 515 aa13.35□□□□□ -0.27
ERCC1-201ENST00000013807 APOBEC3DQ96AK3 386 aaPredicted RBP13.35□□□□□ -0.27
ERCC1-201ENST00000013807 OR2V2Q96R30 315 aa13.35□□□□□ -0.27
ERCC1-201ENST00000013807 COQ7Q99807 217 aa13.35□□□□□ -0.27
ERCC1-201ENST00000013807 NUAK2Q9H093 628 aa13.35□□□□□ -0.27
ERCC1-201ENST00000013807 GORASP2Q9H8Y8 452 aa13.35□□□□□ -0.27
ERCC1-201ENST00000013807 FAM32AQ9Y421 112 aaKnown RBP13.35□□□□□ -0.27
ERCC1-201ENST00000013807 INSIG2Q9Y5U4 225 aa13.35□□□□□ -0.27
ERCC1-201ENST00000013807 RER1O15258 196 aa13.34□□□□□ -0.27
ERCC1-201ENST00000013807 RGS9O75916 674 aaPredicted RBP13.34□□□□□ -0.27
ERCC1-201ENST00000013807 WNT2P09544 360 aa13.34□□□□□ -0.27
ERCC1-201ENST00000013807 EGR1P18146 543 aa13.34□□□□□ -0.27
ERCC1-201ENST00000013807 CRABP1P29762 137 aa13.34□□□□□ -0.27
ERCC1-201ENST00000013807 MDH1P40925 334 aaKnown RBP13.34□□□□□ -0.27
ERCC1-201ENST00000013807 RPS6KA3P51812 740 aa13.34□□□□□ -0.27
ERCC1-201ENST00000013807 UBA52P62987 128 aaKnown RBP13.34□□□□□ -0.27
ERCC1-201ENST00000013807 PAX2Q02962 417 aa13.34□□□□□ -0.27
ERCC1-201ENST00000013807 PAX8Q06710 450 aa13.34□□□□□ -0.27
ERCC1-201ENST00000013807 COX10Q12887 443 aa13.34□□□□□ -0.27
ERCC1-201ENST00000013807 SEC23BQ15437 767 aa13.34□□□□□ -0.27
ERCC1-201ENST00000013807 C3orf56Q8N813 242 aa13.34□□□□□ -0.27
ERCC1-201ENST00000013807 OR13G1Q8NGZ3 307 aa13.34□□□□□ -0.27
ERCC1-201ENST00000013807 ITLN1Q8WWA0 313 aa13.34□□□□□ -0.27
ERCC1-201ENST00000013807 FAM162AQ96A26 154 aa13.34□□□□□ -0.27
ERCC1-201ENST00000013807 RSRC1Q96IZ7 334 aaKnown RBP13.34□□□□□ -0.27
ERCC1-201ENST00000013807 KCTD14Q9BQ13 255 aaPredicted RBP13.34□□□□□ -0.27
ERCC1-201ENST00000013807 SLC30A2Q9BRI3 323 aa13.34□□□□□ -0.27
ERCC1-201ENST00000013807 HDHD2Q9H0R4 259 aa13.34□□□□□ -0.27
ERCC1-201ENST00000013807 MYLK2Q9H1R3 596 aa13.34□□□□□ -0.27
ERCC1-201ENST00000013807 NUP50Q9UKX7 468 aa13.34□□□□□ -0.27
ERCC1-201ENST00000013807 SAMD4AQ9UPU9 718 aaKnown RBP13.34□□□□□ -0.27
ERCC1-201ENST00000013807 IER3IP1Q9Y5U9 82 aa13.34□□□□□ -0.27
ERCC1-201ENST00000013807 LHFPL6Q9Y693 200 aa13.34□□□□□ -0.27
ERCC1-201ENST00000013807 IGLV1-36A0A0B4J1U3 117 aa13.33□□□□□ -0.28
ERCC1-201ENST00000013807 TRBV4-1A0A0J9YWV2 114 aa13.33□□□□□ -0.28
ERCC1-201ENST00000013807 DCTN6O00399 190 aa13.33□□□□□ -0.28
ERCC1-201ENST00000013807 DBHP09172 617 aa13.33□□□□□ -0.28
ERCC1-201ENST00000013807 NCK1P16333 377 aa13.33□□□□□ -0.28
ERCC1-201ENST00000013807 ERFP50548 548 aa13.33□□□□□ -0.28
ERCC1-201ENST00000013807 NUDT2P50583 147 aa13.33□□□□□ -0.28
ERCC1-201ENST00000013807 MMP16P51512 607 aa13.33□□□□□ -0.28
ERCC1-201ENST00000013807 PSME3P61289 254 aa13.33□□□□□ -0.28
ERCC1-201ENST00000013807 KLF17Q5JT82 389 aaPredicted RBP13.33□□□□□ -0.28
ERCC1-201ENST00000013807 GLYATQ6IB77 296 aa13.33□□□□□ -0.28
ERCC1-201ENST00000013807 SMARCD3Q6STE5 483 aa13.33□□□□□ -0.28
ERCC1-201ENST00000013807 DACT3Q96B18 629 aaPredicted RBP13.33□□□□□ -0.28
ERCC1-201ENST00000013807 CMTM5Q96DZ9 223 aa13.33□□□□□ -0.28
ERCC1-201ENST00000013807 GPA33Q99795 319 aa13.33□□□□□ -0.28
ERCC1-201ENST00000013807 SPAG4Q9NPE6 437 aa13.33□□□□□ -0.28
ERCC1-201ENST00000013807 KRCC1Q9NPI7 259 aaPredicted RBP13.33□□□□□ -0.28
ERCC1-201ENST00000013807 IL20RAQ9UHF4 553 aa13.33□□□□□ -0.28
ERCC1-201ENST00000013807 B9D1Q9UPM9 204 aa13.33□□□□□ -0.28
ERCC1-201ENST00000013807 LRCH1Q9Y2L9 728 aa13.33□□□□□ -0.28
ERCC1-201ENST00000013807 AUP1Q9Y679 476 aa13.33□□□□□ -0.28
ERCC1-201ENST00000013807 UNC119BA6NIH7 251 aa13.32□□□□□ -0.28
ERCC1-201ENST00000013807 IQCF6A8MYZ5 107 aa13.32□□□□□ -0.28
ERCC1-201ENST00000013807 SOCS2O14508 198 aa13.32□□□□□ -0.28
ERCC1-201ENST00000013807 SEMG1P04279 462 aa13.32□□□□□ -0.28
ERCC1-201ENST00000013807 HKR1P10072 659 aa13.32□□□□□ -0.28
ERCC1-201ENST00000013807 PRDX6P30041 224 aa13.32□□□□□ -0.28
ERCC1-201ENST00000013807 GATA4P43694 442 aa13.32□□□□□ -0.28
ERCC1-201ENST00000013807 SEC61A1P61619 476 aaKnown RBP13.32□□□□□ -0.28
ERCC1-201ENST00000013807 HNRNPA0Q13151 305 aaKnown RBP13.32□□□□□ -0.28
ERCC1-201ENST00000013807 RFX4Q33E94 735 aa13.32□□□□□ -0.28
ERCC1-201ENST00000013807 DNM1P34Q6PK57 102 aa13.32□□□□□ -0.28
ERCC1-201ENST00000013807 C9orf139Q6ZV77 190 aa13.32□□□□□ -0.28
ERCC1-201ENST00000013807 ZBTB46Q86UZ6 589 aa13.32□□□□□ -0.28
ERCC1-201ENST00000013807 OR6V1Q8N148 313 aa13.32□□□□□ -0.28
ERCC1-201ENST00000013807 MEGF10Q96KG7 1140 aa13.32□□□□□ -0.28
ERCC1-201ENST00000013807 ZNF582Q96NG8 517 aaPredicted RBP13.32□□□□□ -0.28
ERCC1-201ENST00000013807 C1QTNF5Q9BXJ0 243 aa13.32□□□□□ -0.28
ERCC1-201ENST00000013807 ZMAT3Q9HA38 289 aaKnown RBP13.32□□□□□ -0.28
ERCC1-201ENST00000013807 TMEM165Q9HC07 324 aa13.32□□□□□ -0.28
ERCC1-201ENST00000013807 DDX28Q9NUL7 540 aaKnown RBP13.32□□□□□ -0.28
ERCC1-201ENST00000013807 AURKCQ9UQB9 309 aa13.32□□□□□ -0.28
ERCC1-201ENST00000013807 CEACAM18A8MTB9 384 aa13.31□□□□□ -0.28
ERCC1-201ENST00000013807 CLDN34H7C241 214 aa13.31□□□□□ -0.28
ERCC1-201ENST00000013807 MLNRO43193 412 aa13.31□□□□□ -0.28
ERCC1-201ENST00000013807 PPP1R3DO95685 299 aa13.31□□□□□ -0.28
ERCC1-201ENST00000013807 PRTN3P24158 256 aa13.31□□□□□ -0.28
ERCC1-201ENST00000013807 RBMXP38159 391 aaKnown RBP13.31□□□□□ -0.28
ERCC1-201ENST00000013807 SRP9P49458 86 aaKnown RBP13.31□□□□□ -0.28
ERCC1-201ENST00000013807 SMIM11AP58511 58 aa13.31□□□□□ -0.28
ERCC1-201ENST00000013807 FOXL1Q12952 345 aa13.31□□□□□ -0.28
ERCC1-201ENST00000013807 ECH1Q13011 328 aa13.31□□□□□ -0.28
ERCC1-201ENST00000013807 HLXQ14774 488 aaPredicted RBP13.31□□□□□ -0.28
ERCC1-201ENST00000013807 ESCO2Q56NI9 601 aa13.31□□□□□ -0.28
ERCC1-201ENST00000013807 AWAT1Q58HT5 328 aa13.31□□□□□ -0.28
ERCC1-201ENST00000013807 FGD3Q5JSP0 725 aa13.31□□□□□ -0.28
ERCC1-201ENST00000013807 OR2T2Q6IF00 324 aa13.31□□□□□ -0.28
ERCC1-201ENST00000013807 FAM86B1Q8N7N1 296 aa13.31□□□□□ -0.28
ERCC1-201ENST00000013807 CELF2-AS1Q8N7Q2 184 aa13.31□□□□□ -0.28
ERCC1-201ENST00000013807 SLC26A10Q8NG04 563 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms