RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 COX5BP10606 129 aa18.74■□□□□ 0.59
TSPAN9-208ENST00000640568 CD40P25942 277 aa18.74■□□□□ 0.59
TSPAN9-208ENST00000640568 COL8A1P27658 744 aa18.74■□□□□ 0.59
TSPAN9-208ENST00000640568 GDI2P50395 445 aaKnown RBP18.74■□□□□ 0.59
TSPAN9-208ENST00000640568 HCCSP53701 268 aa18.74■□□□□ 0.59
TSPAN9-208ENST00000640568 ACTC1P68032 377 aa18.74■□□□□ 0.59
TSPAN9-208ENST00000640568 ACTA1P68133 377 aa18.74■□□□□ 0.59
TSPAN9-208ENST00000640568 HIST1H3AP68431 136 aa18.74■□□□□ 0.59
TSPAN9-208ENST00000640568 BSPH1Q075Z2 132 aa18.74■□□□□ 0.59
TSPAN9-208ENST00000640568 RAB40BQ12829 278 aa18.74■□□□□ 0.59
TSPAN9-208ENST00000640568 HIST2H3PS2Q5TEC6 136 aa18.74■□□□□ 0.59
TSPAN9-208ENST00000640568 HIST2H3AQ71DI3 136 aa18.74■□□□□ 0.59
TSPAN9-208ENST00000640568 ZNF584Q8IVC4 421 aa18.74■□□□□ 0.59
TSPAN9-208ENST00000640568 PIAS4Q8N2W9 510 aaPredicted RBP18.74■□□□□ 0.59
TSPAN9-208ENST00000640568 CPEB3Q8NE35 698 aaKnown RBP18.74■□□□□ 0.59
TSPAN9-208ENST00000640568 OR1F12Q8NHA8 337 aa18.74■□□□□ 0.59
TSPAN9-208ENST00000640568 TBX5Q99593 518 aa18.74■□□□□ 0.59
TSPAN9-208ENST00000640568 ATF6BQ99941 703 aa18.74■□□□□ 0.59
TSPAN9-208ENST00000640568 ABHD6Q9BV23 337 aa18.74■□□□□ 0.59
TSPAN9-208ENST00000640568 CDH20Q9HBT6 801 aa18.74■□□□□ 0.59
TSPAN9-208ENST00000640568 ZNF878C9JN71 531 aa18.73■□□□□ 0.59
TSPAN9-208ENST00000640568 DENRO43583 198 aaKnown RBP18.73■□□□□ 0.59
TSPAN9-208ENST00000640568 SYNGR3O43761 229 aa18.73■□□□□ 0.59
TSPAN9-208ENST00000640568 FADS2O95864 444 aaKnown RBP18.73■□□□□ 0.59
TSPAN9-208ENST00000640568 CRYAAP02489 173 aa18.73■□□□□ 0.59
TSPAN9-208ENST00000640568 CD3EP07766 207 aa18.73■□□□□ 0.59
TSPAN9-208ENST00000640568 OR2T7P0C7T2 308 aa18.73■□□□□ 0.59
TSPAN9-208ENST00000640568 MED21Q13503 144 aa18.73■□□□□ 0.59
TSPAN9-208ENST00000640568 C6orf141Q5SZD1 244 aa18.73■□□□□ 0.59
TSPAN9-208ENST00000640568 NCMAPQ5T1S8 102 aa18.73■□□□□ 0.59
TSPAN9-208ENST00000640568 KCTD18Q6PI47 426 aaPredicted RBP18.73■□□□□ 0.59
TSPAN9-208ENST00000640568 SPATC1Q76KD6 591 aa18.73■□□□□ 0.59
TSPAN9-208ENST00000640568 MYPOPQ86VE0 399 aaPredicted RBP18.73■□□□□ 0.59
TSPAN9-208ENST00000640568 OR2T27Q8NH04 317 aa18.73■□□□□ 0.59
TSPAN9-208ENST00000640568 ST7LQ8TDW4 575 aa18.73■□□□□ 0.59
TSPAN9-208ENST00000640568 LGALS12Q96DT0 336 aa18.73■□□□□ 0.59
TSPAN9-208ENST00000640568 COQ7Q99807 217 aa18.73■□□□□ 0.59
TSPAN9-208ENST00000640568 COPS4Q9BT78 406 aa18.73■□□□□ 0.59
TSPAN9-208ENST00000640568 SCN3BQ9NY72 215 aa18.73■□□□□ 0.59
TSPAN9-208ENST00000640568 ATPIF1Q9UII2 106 aa18.73■□□□□ 0.59
TSPAN9-208ENST00000640568 EXOGQ9Y2C4 368 aaKnown RBP18.73■□□□□ 0.59
TSPAN9-208ENST00000640568 SPTAN1Q13813 2472 aaKnown RBP18.72■□□□□ 0.59
TSPAN9-208ENST00000640568 C5orf49A4QMS7 147 aa18.72■□□□□ 0.59
TSPAN9-208ENST00000640568 OR6C6A6NF89 314 aa18.72■□□□□ 0.59
TSPAN9-208ENST00000640568 DPRXA6NFQ7 191 aa18.72■□□□□ 0.59
TSPAN9-208ENST00000640568 ABCD4O14678 606 aa18.72■□□□□ 0.59
TSPAN9-208ENST00000640568 GOSR1O95249 250 aa18.72■□□□□ 0.59
TSPAN9-208ENST00000640568 CXCR4P61073 352 aa18.72■□□□□ 0.59
TSPAN9-208ENST00000640568 CSNK2BP67870 215 aa18.72■□□□□ 0.59
TSPAN9-208ENST00000640568 NAAAQ02083 359 aa18.72■□□□□ 0.59
TSPAN9-208ENST00000640568 ECH1Q13011 328 aa18.72■□□□□ 0.59
TSPAN9-208ENST00000640568 DAZAP2Q15038 168 aaPredicted RBP18.72■□□□□ 0.59
TSPAN9-208ENST00000640568 ASB17Q8WXJ9 295 aa18.72■□□□□ 0.59
TSPAN9-208ENST00000640568 RADILQ96JH8 1075 aa18.72■□□□□ 0.59
TSPAN9-208ENST00000640568 COPS3Q9UNS2 423 aa18.72■□□□□ 0.59
TSPAN9-208ENST00000640568 PKDREJQ9NTG1 2253 aa18.72■□□□□ 0.59
TSPAN9-208ENST00000640568 A6NNC1 897 aa18.71■□□□□ 0.59
TSPAN9-208ENST00000640568 XPNPEP2O43895 674 aa18.71■□□□□ 0.59
TSPAN9-208ENST00000640568 CCL2P13500 99 aa18.71■□□□□ 0.59
TSPAN9-208ENST00000640568 ALOX5APP20292 161 aa18.71■□□□□ 0.59
TSPAN9-208ENST00000640568 HSD11B1P28845 292 aa18.71■□□□□ 0.59
TSPAN9-208ENST00000640568 SLC15A1P46059 708 aa18.71■□□□□ 0.59
TSPAN9-208ENST00000640568 GALK2Q01415 458 aa18.71■□□□□ 0.59
TSPAN9-208ENST00000640568 SLC22A25Q6T423 547 aa18.71■□□□□ 0.59
TSPAN9-208ENST00000640568 KRT77Q7Z794 578 aa18.71■□□□□ 0.59
TSPAN9-208ENST00000640568 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.71■□□□□ 0.59
TSPAN9-208ENST00000640568 SPTSSAQ969W0 71 aa18.71■□□□□ 0.59
TSPAN9-208ENST00000640568 TTTY10Q9BZA0 68 aa18.71■□□□□ 0.59
TSPAN9-208ENST00000640568 PNRC2Q9NPJ4 139 aaKnown RBP18.71■□□□□ 0.59
TSPAN9-208ENST00000640568 MRPS18AQ9NVS2 196 aaKnown RBP18.71■□□□□ 0.59
TSPAN9-208ENST00000640568 IKZF2Q9UKS7 526 aa18.71■□□□□ 0.59
TSPAN9-208ENST00000640568 KLHDC2Q9Y2U9 406 aa18.71■□□□□ 0.59
TSPAN9-208ENST00000640568 EFCAB10A6NFE3 127 aa18.71■□□□□ 0.59
TSPAN9-208ENST00000640568 DEFB108AA8MXU0 73 aa18.71■□□□□ 0.59
TSPAN9-208ENST00000640568 SLC1A7O00341 560 aa18.71■□□□□ 0.59
TSPAN9-208ENST00000640568 H2BFMP0C1H6 154 aa18.71■□□□□ 0.59
TSPAN9-208ENST00000640568 GRB2P62993 217 aaKnown RBP18.71■□□□□ 0.59
TSPAN9-208ENST00000640568 ZNF540Q8NDQ6 660 aa18.71■□□□□ 0.59
TSPAN9-208ENST00000640568 OR52I1Q8NGK6 324 aa18.71■□□□□ 0.59
TSPAN9-208ENST00000640568 RNF133Q8WVZ7 376 aa18.71■□□□□ 0.59
TSPAN9-208ENST00000640568 MRPL48Q96GC5 212 aaKnown RBP18.71■□□□□ 0.59
TSPAN9-208ENST00000640568 POM121L2Q96KW2 1035 aa18.71■□□□□ 0.59
TSPAN9-208ENST00000640568 AMELYQ99218 206 aa18.71■□□□□ 0.59
TSPAN9-208ENST00000640568 MYCBPQ99417 103 aaPredicted RBP18.71■□□□□ 0.59
TSPAN9-208ENST00000640568 MROQ9BYG7 248 aa18.71■□□□□ 0.59
TSPAN9-208ENST00000640568 PLCXD1Q9NUJ7 323 aa18.71■□□□□ 0.59
TSPAN9-208ENST00000640568 POU2F3Q9UKI9 436 aa18.71■□□□□ 0.59
TSPAN9-208ENST00000640568 RNF115Q9Y4L5 304 aa18.71■□□□□ 0.59
TSPAN9-208ENST00000640568 IGHV2OR16-5A0A0B4J2B6 119 aa18.7■□□□□ 0.58
TSPAN9-208ENST00000640568 DAPL1A0PJW8 107 aa18.7■□□□□ 0.58
TSPAN9-208ENST00000640568 F5H5K5 113 aa18.7■□□□□ 0.58
TSPAN9-208ENST00000640568 SIAH2O43255 324 aa18.7■□□□□ 0.58
TSPAN9-208ENST00000640568 LAIR2Q6ISS4 152 aa18.7■□□□□ 0.58
TSPAN9-208ENST00000640568 ADAM5Q6NVV9 412 aa18.7■□□□□ 0.58
TSPAN9-208ENST00000640568 ARL9Q6T311 187 aa18.7■□□□□ 0.58
TSPAN9-208ENST00000640568 ZNF322Q6U7Q0 402 aaPredicted RBP18.7■□□□□ 0.58
TSPAN9-208ENST00000640568 ZNF786Q8N393 782 aa18.7■□□□□ 0.58
TSPAN9-208ENST00000640568 ACBD7Q8N6N7 88 aa18.7■□□□□ 0.58
TSPAN9-208ENST00000640568 OR10S1Q8NGN2 331 aa18.7■□□□□ 0.58
TSPAN9-208ENST00000640568 DDX28Q9NUL7 540 aaKnown RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms