RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 ZNF239Q16600 458 aaKnown RBP7.06□□□□□ -1.28
SCARB2-220ENST00000640076 FAM90A2PQ658T7 463 aa7.06□□□□□ -1.28
SCARB2-220ENST00000640076 HBMQ6B0K9 141 aa7.06□□□□□ -1.28
SCARB2-220ENST00000640076 C19orf48Q6RUI8 117 aa7.06□□□□□ -1.28
SCARB2-220ENST00000640076 PAQR6Q6TCH4 344 aa7.06□□□□□ -1.28
SCARB2-220ENST00000640076 TMEM99Q8N816 258 aa7.06□□□□□ -1.28
SCARB2-220ENST00000640076 EXD3Q8N9H8 876 aa7.06□□□□□ -1.28
SCARB2-220ENST00000640076 SETD9Q8NE22 299 aa7.06□□□□□ -1.28
SCARB2-220ENST00000640076 BBS1Q8NFJ9 593 aa7.06□□□□□ -1.28
SCARB2-220ENST00000640076 OR10D3Q8NH80 312 aa7.06□□□□□ -1.28
SCARB2-220ENST00000640076 WFDC12Q8WWY7 111 aa7.06□□□□□ -1.28
SCARB2-220ENST00000640076 ELMOD3Q96FG2 381 aa7.06□□□□□ -1.28
SCARB2-220ENST00000640076 TIMP4Q99727 224 aa7.06□□□□□ -1.28
SCARB2-220ENST00000640076 SRXN1Q9BYN0 137 aa7.06□□□□□ -1.28
SCARB2-220ENST00000640076 IMPAD1Q9NX62 359 aa7.06□□□□□ -1.28
SCARB2-220ENST00000640076 NPIPA1Q9UND3 350 aa7.06□□□□□ -1.28
SCARB2-220ENST00000640076 BAIAP2Q9UQB8 552 aa7.06□□□□□ -1.28
SCARB2-220ENST00000640076 HSPE1-MOB4S4R3N1 261 aa7.06□□□□□ -1.28
SCARB2-220ENST00000640076 A0A1W2PNV4 684 aa7.06□□□□□ -1.28
SCARB2-220ENST00000640076 A0A1W2PPW3 197 aa7.06□□□□□ -1.28
SCARB2-220ENST00000640076 AHRRA9YTQ3 701 aa7.06□□□□□ -1.28
SCARB2-220ENST00000640076 ZNF814B7Z6K7 855 aa7.06□□□□□ -1.28
SCARB2-220ENST00000640076 C11orf98E9PRG8 122 aa7.06□□□□□ -1.28
SCARB2-220ENST00000640076 MS4A18H0YCH9 400 aa7.06□□□□□ -1.28
SCARB2-220ENST00000640076 ARPC3O15145 178 aa7.06□□□□□ -1.28
SCARB2-220ENST00000640076 CXCL13O43927 109 aa7.06□□□□□ -1.28
SCARB2-220ENST00000640076 OR6A2O95222 327 aa7.06□□□□□ -1.28
SCARB2-220ENST00000640076 CRYABP02511 175 aaKnown RBP7.06□□□□□ -1.28
SCARB2-220ENST00000640076 CD14P08571 375 aa7.06□□□□□ -1.28
SCARB2-220ENST00000640076 CPN1P15169 458 aa7.06□□□□□ -1.28
SCARB2-220ENST00000640076 AHCYP23526 432 aa7.06□□□□□ -1.28
SCARB2-220ENST00000640076 PCYT1AP49585 367 aa7.06□□□□□ -1.28
SCARB2-220ENST00000640076 ERVK-25P63136 954 aa7.06□□□□□ -1.28
SCARB2-220ENST00000640076 MYBPC1Q00872 1141 aa7.06□□□□□ -1.28
SCARB2-220ENST00000640076 IL5RAQ01344 420 aa7.06□□□□□ -1.28
SCARB2-220ENST00000640076 CD47Q08722 323 aa7.06□□□□□ -1.28
SCARB2-220ENST00000640076 PDK3Q15120 406 aa7.06□□□□□ -1.28
SCARB2-220ENST00000640076 MS4A18Q3C1V0 323 aa7.06□□□□□ -1.28
SCARB2-220ENST00000640076 CASP12Q6UXS9 341 aa7.06□□□□□ -1.28
SCARB2-220ENST00000640076 FAM122BQ7Z309 247 aa7.06□□□□□ -1.28
SCARB2-220ENST00000640076 ENTHD1Q8IYW4 607 aa7.06□□□□□ -1.28
SCARB2-220ENST00000640076 KDM8Q8N371 416 aa7.06□□□□□ -1.28
SCARB2-220ENST00000640076 ERMAPQ96PL5 475 aaPredicted RBP7.06□□□□□ -1.28
SCARB2-220ENST00000640076 SLC38A2Q96QD8 506 aa7.06□□□□□ -1.28
SCARB2-220ENST00000640076 KATNB1Q9BVA0 655 aa7.06□□□□□ -1.28
SCARB2-220ENST00000640076 NDEL1Q9GZM8 345 aa7.06□□□□□ -1.28
SCARB2-220ENST00000640076 PLK3Q9H4B4 646 aa7.06□□□□□ -1.28
SCARB2-220ENST00000640076 ZNF226Q9NYT6 803 aa7.06□□□□□ -1.28
SCARB2-220ENST00000640076 TVP23BQ9NYZ1 205 aa7.06□□□□□ -1.28
SCARB2-220ENST00000640076 B3GAT1Q9P2W7 334 aa7.06□□□□□ -1.28
SCARB2-220ENST00000640076 RNF6Q9Y252 685 aa7.06□□□□□ -1.28
SCARB2-220ENST00000640076 IER3IP1Q9Y5U9 82 aa7.06□□□□□ -1.28
SCARB2-220ENST00000640076 E9PI62 339 aa7.05□□□□□ -1.28
SCARB2-220ENST00000640076 SMAD9O15198 467 aaKnown RBP7.05□□□□□ -1.28
SCARB2-220ENST00000640076 SURF4O15260 269 aa7.05□□□□□ -1.28
SCARB2-220ENST00000640076 RNF13O43567 381 aa7.05□□□□□ -1.28
SCARB2-220ENST00000640076 IDH3BO43837 385 aa7.05□□□□□ -1.28
SCARB2-220ENST00000640076 PRKYO43930 277 aa7.05□□□□□ -1.28
SCARB2-220ENST00000640076 RAMP1O60894 148 aa7.05□□□□□ -1.28
SCARB2-220ENST00000640076 RHBDL1O75783 438 aa7.05□□□□□ -1.28
SCARB2-220ENST00000640076 HMGN1P05114 100 aa7.05□□□□□ -1.28
SCARB2-220ENST00000640076 HLA-DOBP13765 273 aa7.05□□□□□ -1.28
SCARB2-220ENST00000640076 SRYQ05066 204 aa7.05□□□□□ -1.28
SCARB2-220ENST00000640076 MAD2L1BPQ15013 274 aaPredicted RBP7.05□□□□□ -1.28
SCARB2-220ENST00000640076 SNAPC1Q16533 368 aa7.05□□□□□ -1.28
SCARB2-220ENST00000640076 PDSS1Q5T2R2 415 aa7.05□□□□□ -1.28
SCARB2-220ENST00000640076 ZNF324BQ6AW86 544 aaPredicted RBP7.05□□□□□ -1.28
SCARB2-220ENST00000640076 STX12Q86Y82 276 aa7.05□□□□□ -1.28
SCARB2-220ENST00000640076 ZGRF1Q86YA3 2104 aa7.05□□□□□ -1.28
SCARB2-220ENST00000640076 TCEANCQ8N8B7 351 aa7.05□□□□□ -1.28
SCARB2-220ENST00000640076 OR8J1Q8NGP2 316 aa7.05□□□□□ -1.28
SCARB2-220ENST00000640076 RHOXF1Q8NHV9 184 aa7.05□□□□□ -1.28
SCARB2-220ENST00000640076 TMEM171Q8WVE6 324 aa7.05□□□□□ -1.28
SCARB2-220ENST00000640076 TRUB1Q8WWH5 349 aaKnown RBP7.05□□□□□ -1.28
SCARB2-220ENST00000640076 ZHX1-C8orf76Q96EF9 292 aa7.05□□□□□ -1.28
SCARB2-220ENST00000640076 WDYHV1Q96HA8 205 aa7.05□□□□□ -1.28
SCARB2-220ENST00000640076 IL4I1Q96RQ9 567 aa7.05□□□□□ -1.28
SCARB2-220ENST00000640076 POLDIP3Q9BY77 421 aaKnown RBP7.05□□□□□ -1.28
SCARB2-220ENST00000640076 PRRG3Q9BZD7 231 aa7.05□□□□□ -1.28
SCARB2-220ENST00000640076 TIGARQ9NQ88 270 aa7.05□□□□□ -1.28
SCARB2-220ENST00000640076 CMC2Q9NRP2 79 aa7.05□□□□□ -1.28
SCARB2-220ENST00000640076 INIPQ9NRY2 104 aa7.05□□□□□ -1.28
SCARB2-220ENST00000640076 STRAPQ9Y3F4 350 aaKnown RBP7.05□□□□□ -1.28
SCARB2-220ENST00000640076 PMF1-BGLAPU3KQ54 211 aa7.05□□□□□ -1.28
SCARB2-220ENST00000640076 NBASA2RRP1 2371 aa7.05□□□□□ -1.28
SCARB2-220ENST00000640076 KALRNO60229 2985 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 IGHV3-15A0A0B4J1V0 119 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 LOC102725191A0A1B0GVB3 256 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 NPIPB13A6NJU9 1138 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 NPIPB4C9JG80 1138 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 TLX2O43763 284 aaPredicted RBP7.04□□□□□ -1.28
SCARB2-220ENST00000640076 MPZL2O60487 215 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 WBP4O75554 376 aaKnown RBP7.04□□□□□ -1.28
SCARB2-220ENST00000640076 SERPINI2O75830 405 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 SLC2A10O95528 541 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 TXNDC12O95881 172 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 IGHMP01871 453 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 HIST1H1CP16403 213 aaKnown RBP7.04□□□□□ -1.28
SCARB2-220ENST00000640076 MLLT10P55197 1068 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 SNRPGP62308 76 aaKnown RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms