RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 SLC25A28Q96A46 364 aa19.14■□□□□ 0.65
CLN6-224ENST00000638076 GNRHR2Q96P88 292 aa19.14■□□□□ 0.65
CLN6-224ENST00000638076 TRAF4Q9BUZ4 470 aaPredicted RBP19.14■□□□□ 0.65
CLN6-224ENST00000638076 ANGPTL4Q9BY76 406 aa19.14■□□□□ 0.65
CLN6-224ENST00000638076 EMC7Q9NPA0 242 aa19.14■□□□□ 0.65
CLN6-224ENST00000638076 FAM206AQ9NX38 181 aa19.14■□□□□ 0.65
CLN6-224ENST00000638076 AQP7P3A6NL99 342 aa19.13■□□□□ 0.65
CLN6-224ENST00000638076 G3V3Y1 287 aa19.13■□□□□ 0.65
CLN6-224ENST00000638076 PEX14O75381 377 aa19.13■□□□□ 0.65
CLN6-224ENST00000638076 KDM4BO94953 1096 aa19.13■□□□□ 0.65
CLN6-224ENST00000638076 UBCP0CG48 685 aaKnown RBP19.13■□□□□ 0.65
CLN6-224ENST00000638076 CDAP32320 146 aa19.13■□□□□ 0.65
CLN6-224ENST00000638076 SPOCK1Q08629 439 aa19.13■□□□□ 0.65
CLN6-224ENST00000638076 KLHL24Q6TFL4 600 aa19.13■□□□□ 0.65
CLN6-224ENST00000638076 GTPBP8Q8N3Z3 284 aaPredicted RBP19.13■□□□□ 0.65
CLN6-224ENST00000638076 TMEM156Q8N614 296 aa19.13■□□□□ 0.65
CLN6-224ENST00000638076 PROK2Q9HC23 129 aa19.13■□□□□ 0.65
CLN6-224ENST00000638076 STMN3Q9NZ72 180 aa19.13■□□□□ 0.65
CLN6-224ENST00000638076 CGGBP1Q9UFW8 167 aaPredicted RBP19.13■□□□□ 0.65
CLN6-224ENST00000638076 A0A087WZY1 265 aa19.13■□□□□ 0.65
CLN6-224ENST00000638076 CIB4A0PJX0 185 aa19.13■□□□□ 0.65
CLN6-224ENST00000638076 DCDC2BA2VCK2 349 aa19.13■□□□□ 0.65
CLN6-224ENST00000638076 FABP7O15540 132 aa19.13■□□□□ 0.65
CLN6-224ENST00000638076 C1QTNF12Q5T7M4 302 aa19.13■□□□□ 0.65
CLN6-224ENST00000638076 CFAP77Q6ZQR2 320 aa19.13■□□□□ 0.65
CLN6-224ENST00000638076 TMPPEQ6ZT21 453 aa19.13■□□□□ 0.65
CLN6-224ENST00000638076 HDDC2Q7Z4H3 204 aa19.13■□□□□ 0.65
CLN6-224ENST00000638076 RPS19BP1Q86WX3 136 aaKnown RBP19.13■□□□□ 0.65
CLN6-224ENST00000638076 MS4A3Q96HJ5 214 aa19.13■□□□□ 0.65
CLN6-224ENST00000638076 OR10A4Q9H209 315 aa19.13■□□□□ 0.65
CLN6-224ENST00000638076 SLA2Q9H6Q3 261 aa19.13■□□□□ 0.65
CLN6-224ENST00000638076 POLR1DQ9Y2S0 133 aa19.13■□□□□ 0.65
CLN6-224ENST00000638076 MRPS18BQ9Y676 258 aaKnown RBP19.13■□□□□ 0.65
CLN6-224ENST00000638076 LHFPL6Q9Y693 200 aa19.13■□□□□ 0.65
CLN6-224ENST00000638076 ZDBF2Q9HCK1 2354 aa19.13■□□□□ 0.65
CLN6-224ENST00000638076 TRAV18A0A075B6X5 111 aa19.12■□□□□ 0.65
CLN6-224ENST00000638076 GP1BAP07359 652 aa19.12■□□□□ 0.65
CLN6-224ENST00000638076 CXCL3P19876 107 aa19.12■□□□□ 0.65
CLN6-224ENST00000638076 SLC35A1P78382 337 aa19.12■□□□□ 0.65
CLN6-224ENST00000638076 PAQR8Q8TEZ7 354 aa19.12■□□□□ 0.65
CLN6-224ENST00000638076 JSRP1Q96MG2 331 aaPredicted RBP19.12■□□□□ 0.65
CLN6-224ENST00000638076 GDF2Q9UK05 429 aaPredicted RBP19.12■□□□□ 0.65
CLN6-224ENST00000638076 TECTAO75443 2155 aa19.12■□□□□ 0.65
CLN6-224ENST00000638076 MED12Q93074 2177 aa19.12■□□□□ 0.65
CLN6-224ENST00000638076 A6NL46 340 aa19.12■□□□□ 0.65
CLN6-224ENST00000638076 H7C417 338 aa19.12■□□□□ 0.65
CLN6-224ENST00000638076 RBBP9O75884 186 aa19.12■□□□□ 0.65
CLN6-224ENST00000638076 ALDOBP05062 364 aa19.12■□□□□ 0.65
CLN6-224ENST00000638076 ACSM4P0C7M7 580 aa19.12■□□□□ 0.65
CLN6-224ENST00000638076 ZNF239Q16600 458 aaKnown RBP19.12■□□□□ 0.65
CLN6-224ENST00000638076 TMEM105Q8N8V8 129 aa19.12■□□□□ 0.65
CLN6-224ENST00000638076 ATG5Q9H1Y0 275 aa19.12■□□□□ 0.65
CLN6-224ENST00000638076 SLC17A5Q9NRA2 495 aa19.12■□□□□ 0.65
CLN6-224ENST00000638076 MTFP1Q9UDX5 166 aa19.12■□□□□ 0.65
CLN6-224ENST00000638076 MEGF11A6BM72 1044 aa19.11■□□□□ 0.65
CLN6-224ENST00000638076 TTRP02766 147 aa19.11■□□□□ 0.65
CLN6-224ENST00000638076 ACP1P24666 158 aa19.11■□□□□ 0.65
CLN6-224ENST00000638076 VEGFCP49767 419 aa19.11■□□□□ 0.65
CLN6-224ENST00000638076 PCGF3Q3KNV8 242 aa19.11■□□□□ 0.65
CLN6-224ENST00000638076 SLC25A47Q6Q0C1 308 aa19.11■□□□□ 0.65
CLN6-224ENST00000638076 FGD2Q7Z6J4 655 aa19.11■□□□□ 0.65
CLN6-224ENST00000638076 OR6M1Q8NGM8 313 aa19.11■□□□□ 0.65
CLN6-224ENST00000638076 PBOV1Q9GZY1 135 aa19.11■□□□□ 0.65
CLN6-224ENST00000638076 SH2D2AQ9NP31 389 aa19.11■□□□□ 0.65
CLN6-224ENST00000638076 HPF1Q9NWY4 346 aa19.11■□□□□ 0.65
CLN6-224ENST00000638076 ZNF726A6NNF4 738 aa19.11■□□□□ 0.65
CLN6-224ENST00000638076 B4E171 279 aa19.11■□□□□ 0.65
CLN6-224ENST00000638076 HPXP02790 462 aa19.11■□□□□ 0.65
CLN6-224ENST00000638076 CD37P11049 281 aa19.11■□□□□ 0.65
CLN6-224ENST00000638076 LIFP15018 202 aa19.11■□□□□ 0.65
CLN6-224ENST00000638076 TSPAN7P41732 249 aa19.11■□□□□ 0.65
CLN6-224ENST00000638076 MLF1P58340 268 aa19.11■□□□□ 0.65
CLN6-224ENST00000638076 LINC00303Q3SY05 128 aa19.11■□□□□ 0.65
CLN6-224ENST00000638076 RAET1LQ5VY80 246 aa19.11■□□□□ 0.65
CLN6-224ENST00000638076 JAGN1Q8N5M9 183 aa19.11■□□□□ 0.65
CLN6-224ENST00000638076 OR2AJ1Q8NGZ0 328 aa19.11■□□□□ 0.65
CLN6-224ENST00000638076 RHBDD1Q8TEB9 315 aa19.11■□□□□ 0.65
CLN6-224ENST00000638076 HYLS1Q96M11 299 aa19.11■□□□□ 0.65
CLN6-224ENST00000638076 ARPC1BO15143 372 aaKnown RBP19.1■□□□□ 0.65
CLN6-224ENST00000638076 SSNA1O43805 119 aa19.1■□□□□ 0.65
CLN6-224ENST00000638076 QDPRP09417 244 aa19.1■□□□□ 0.65
CLN6-224ENST00000638076 ANXA3P12429 323 aa19.1■□□□□ 0.65
CLN6-224ENST00000638076 DSCR4P56555 118 aaPredicted RBP19.1■□□□□ 0.65
CLN6-224ENST00000638076 RPS18P62269 152 aaKnown RBP19.1■□□□□ 0.65
CLN6-224ENST00000638076 GUCA2AQ02747 115 aa19.1■□□□□ 0.65
CLN6-224ENST00000638076 ELMOD2Q8IZ81 293 aa19.1■□□□□ 0.65
CLN6-224ENST00000638076 NOX3Q9HBY0 568 aa19.1■□□□□ 0.65
CLN6-224ENST00000638076 FBXO4Q9UKT5 387 aa19.1■□□□□ 0.65
CLN6-224ENST00000638076 LOC102725191A0A1B0GVB3 256 aa19.09■□□□□ 0.65
CLN6-224ENST00000638076 STK17BO94768 372 aa19.09■□□□□ 0.65
CLN6-224ENST00000638076 PMS2P2O95744 297 aa19.09■□□□□ 0.65
CLN6-224ENST00000638076 HIST3H3Q16695 136 aa19.09■□□□□ 0.65
CLN6-224ENST00000638076 DCAF12Q5T6F0 453 aa19.09■□□□□ 0.65
CLN6-224ENST00000638076 ZNF468Q5VIY5 522 aaPredicted RBP19.09■□□□□ 0.65
CLN6-224ENST00000638076 LAMTOR1Q6IAA8 161 aa19.09■□□□□ 0.65
CLN6-224ENST00000638076 LUZP2Q86TE4 346 aa19.09■□□□□ 0.65
CLN6-224ENST00000638076 CDH24Q86UP0 819 aa19.09■□□□□ 0.65
CLN6-224ENST00000638076 FGGYQ96C11 551 aa19.09■□□□□ 0.65
CLN6-224ENST00000638076 DKKL1Q9UK85 242 aa19.09■□□□□ 0.65
CLN6-224ENST00000638076 CLDN17P56750 224 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms