RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 CHST10O43529 356 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 PDE6DO43924 150 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 PRAMEF10O60809 474 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 UGT2B11O75310 529 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 SUPT7LO94864 414 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 C1orf105O95561 183 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 HAND1O96004 215 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 IGF2P01344 180 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 IFNA1P01562 189 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 IGHG4P01861 327 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 CRYAAP02489 173 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 C1QCP02747 245 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 RLN2P04090 185 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 RPLP0P05388 317 aaKnown RBP2.61□□□□□ -1.99
VIM-210ENST00000637053 SERPINA7P05543 415 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 HLA-DOAP06340 250 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 CTSLP07711 333 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 UMODP07911 640 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 NPSP0C0P6 89 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 ZNF806P0C7X5 589 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 DUX4L4P0CJ87 422 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 LIMS3P0CW19 117 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 LIMS4P0CW20 117 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 VSIG10L2P0DP72 767 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 UNGP13051 313 aaPredicted RBP2.61□□□□□ -1.99
VIM-210ENST00000637053 GABRA1P14867 456 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 MUC1P15941 1255 aaPredicted RBP2.61□□□□□ -1.99
VIM-210ENST00000637053 FPR3P25089 353 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 HTR1EP28566 365 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 GRPRP30550 384 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 NTSP30990 170 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 CEACAM8P31997 349 aaPredicted RBP2.61□□□□□ -1.99
VIM-210ENST00000637053 CD200P41217 278 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 KIR2DS4P43632 304 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 XCR1P46094 333 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 AQP5P55064 265 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 CDKN2DP55273 166 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 KLF3P57682 345 aaPredicted RBP2.61□□□□□ -1.99
VIM-210ENST00000637053 TAS2R31P59538 309 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 GNG3P63215 75 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 NTHL1P78549 312 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 PSG6Q00889 435 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 EMX2Q04743 252 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 CD300CQ08708 224 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 ZNF616Q08AN1 781 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 ST3GAL1Q11201 340 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 FOXF2Q12947 444 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 GAGE2BQ13066 116 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 OR2F1Q13607 317 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 PKP1Q13835 747 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 KIAA0141Q14154 515 aaPredicted RBP2.61□□□□□ -1.99
VIM-210ENST00000637053 ABRAXAS2Q15018 415 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 OR1C1Q15619 314 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 SPDYE7PQ495Y7 208 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 GAGE2EQ4V326 116 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 SYTL3Q4VX76 610 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 LIN52Q52LA3 116 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 PYCR3Q53H96 274 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 VWA2Q5GFL6 755 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 TCTEX1D4Q5JR98 221 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 FAM78BQ5VT40 261 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 SAMD13Q5VXD3 122 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 METRNLQ641Q3 311 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 KIAA0895LQ68EN5 471 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 SP5Q6BEB4 398 aaPredicted RBP2.61□□□□□ -1.99
VIM-210ENST00000637053 OR52E8Q6IFG1 317 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 GAGE2AQ6NT46 116 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 ANKRD54Q6NXT1 300 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 ATRAIDQ6UW56 229 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 Q6YL49 198 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 LRRC55Q6ZSA7 311 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 LANCL3Q6ZV70 420 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 MRPL52Q86TS9 123 aaKnown RBP2.61□□□□□ -1.99
VIM-210ENST00000637053 LRRC28Q86X40 367 aaPredicted RBP2.61□□□□□ -1.99
VIM-210ENST00000637053 MMD2Q8IY49 270 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 LRRC25Q8N386 305 aaPredicted RBP2.61□□□□□ -1.99
VIM-210ENST00000637053 ZNF283Q8N7M2 679 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 ZNF676Q8N7Q3 588 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 AQP11Q8NBQ7 271 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 ST6GALNAC3Q8NDV1 305 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 GPR32P1Q8NGA4 272 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 OR6K6Q8NGW6 343 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 OR1P1Q8NH06 330 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 OR56B4Q8NH76 319 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 AGAP11Q8TF27 550 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 Q8WTZ3 238 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 GHSRQ92847 366 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 UBE2E3Q969T4 207 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 SDSLQ96GA7 329 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 ZNF486Q96H40 463 aaPredicted RBP2.61□□□□□ -1.99
VIM-210ENST00000637053 ZNF641Q96N77 438 aaPredicted RBP2.61□□□□□ -1.99
VIM-210ENST00000637053 ZNF599Q96NL3 588 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 DUX3Q96PT4 197 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 CPXM1Q96SM3 734 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 APOL4Q9BPW4 351 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 BTBD10Q9BSF8 475 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 TRAF4Q9BUZ4 470 aaPredicted RBP2.61□□□□□ -1.99
VIM-210ENST00000637053 CCDC32Q9BV29 185 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 OSBPL11Q9BXB4 747 aa2.61□□□□□ -1.99
VIM-210ENST00000637053 MS4A8Q9BY19 250 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms