RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 SAMD4BQ5PRF9 694 aaKnown RBP15.22■□□□□ 0.03
PNKP-225ENST00000636214 SMARCD3Q6STE5 483 aa15.22■□□□□ 0.03
PNKP-225ENST00000636214 VASH1Q7L8A9 365 aaPredicted RBP15.22■□□□□ 0.03
PNKP-225ENST00000636214 ST7LQ8TDW4 575 aa15.22■□□□□ 0.03
PNKP-225ENST00000636214 ZNF418Q8TF45 676 aaPredicted RBP15.22■□□□□ 0.03
PNKP-225ENST00000636214 NSMCE2Q96MF7 247 aa15.22■□□□□ 0.03
PNKP-225ENST00000636214 VSX1Q9NZR4 365 aaPredicted RBP15.22■□□□□ 0.03
PNKP-225ENST00000636214 ASH2LQ9UBL3 628 aa15.22■□□□□ 0.03
PNKP-225ENST00000636214 PCDHB10Q9UN67 800 aa15.22■□□□□ 0.03
PNKP-225ENST00000636214 CACNG2Q9Y698 323 aa15.22■□□□□ 0.03
PNKP-225ENST00000636214 SURF4O15260 269 aa15.21■□□□□ 0.03
PNKP-225ENST00000636214 SNX3O60493 162 aa15.21■□□□□ 0.03
PNKP-225ENST00000636214 PTP4A3O75365 173 aa15.21■□□□□ 0.03
PNKP-225ENST00000636214 GADD45GO95257 159 aa15.21■□□□□ 0.03
PNKP-225ENST00000636214 RENP00797 406 aa15.21■□□□□ 0.03
PNKP-225ENST00000636214 IGHV2-5P01817 119 aa15.21■□□□□ 0.03
PNKP-225ENST00000636214 SCG5P05408 212 aa15.21■□□□□ 0.03
PNKP-225ENST00000636214 CD55P08174 381 aa15.21■□□□□ 0.03
PNKP-225ENST00000636214 ZNF26P17031 533 aaPredicted RBP15.21■□□□□ 0.03
PNKP-225ENST00000636214 NOS3P29474 1203 aa15.21■□□□□ 0.03
PNKP-225ENST00000636214 SLC6A6P31641 620 aa15.21■□□□□ 0.03
PNKP-225ENST00000636214 MXRA7P84157 204 aa15.21■□□□□ 0.03
PNKP-225ENST00000636214 PSG7Q13046 419 aa15.21■□□□□ 0.03
PNKP-225ENST00000636214 DCAF12L2Q5VW00 463 aa15.21■□□□□ 0.03
PNKP-225ENST00000636214 THSD4Q6ZMP0 1018 aa15.21■□□□□ 0.03
PNKP-225ENST00000636214 ZNF771Q7L3S4 317 aaPredicted RBP15.21■□□□□ 0.03
PNKP-225ENST00000636214 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.21■□□□□ 0.03
PNKP-225ENST00000636214 OR5L1Q8NGL2 311 aa15.21■□□□□ 0.03
PNKP-225ENST00000636214 OR1F12Q8NHA8 337 aa15.21■□□□□ 0.03
PNKP-225ENST00000636214 PYURFQ96I23 114 aa15.21■□□□□ 0.03
PNKP-225ENST00000636214 GORASP2Q9H8Y8 452 aa15.21■□□□□ 0.03
PNKP-225ENST00000636214 NDE1Q9NXR1 346 aa15.21■□□□□ 0.03
PNKP-225ENST00000636214 ATPIF1Q9UII2 106 aa15.21■□□□□ 0.03
PNKP-225ENST00000636214 PURGQ9UJV8 347 aaKnown RBP15.21■□□□□ 0.03
PNKP-225ENST00000636214 TMCC3Q9ULS5 477 aa15.21■□□□□ 0.03
PNKP-225ENST00000636214 A0A0A6YYJ9 748 aa15.2■□□□□ 0.02
PNKP-225ENST00000636214 OR6C6A6NF89 314 aa15.2■□□□□ 0.02
PNKP-225ENST00000636214 J3QW42 95 aa15.2■□□□□ 0.02
PNKP-225ENST00000636214 PLPP2O43688 288 aa15.2■□□□□ 0.02
PNKP-225ENST00000636214 OR10H3O60404 316 aa15.2■□□□□ 0.02
PNKP-225ENST00000636214 FABP3P05413 133 aa15.2■□□□□ 0.02
PNKP-225ENST00000636214 TSEN54Q7Z6J9 526 aaKnown RBP15.2■□□□□ 0.02
PNKP-225ENST00000636214 FAM86B1Q8N7N1 296 aa15.2■□□□□ 0.02
PNKP-225ENST00000636214 OR2Z1Q8NG97 314 aa15.2■□□□□ 0.02
PNKP-225ENST00000636214 PTP4A1Q93096 173 aa15.2■□□□□ 0.02
PNKP-225ENST00000636214 CMBLQ96DG6 245 aa15.2■□□□□ 0.02
PNKP-225ENST00000636214 C7orf34Q96L11 122 aa15.2■□□□□ 0.02
PNKP-225ENST00000636214 ERMAPQ96PL5 475 aaPredicted RBP15.2■□□□□ 0.02
PNKP-225ENST00000636214 DCLRE1CQ96SD1 692 aaKnown RBP15.2■□□□□ 0.02
PNKP-225ENST00000636214 IFT27Q9BW83 186 aa15.2■□□□□ 0.02
PNKP-225ENST00000636214 NUAK2Q9H093 628 aa15.2■□□□□ 0.02
PNKP-225ENST00000636214 TANC2Q9HCD6 1990 aa15.2■□□□□ 0.02
PNKP-225ENST00000636214 DYSFO75923 2080 aa15.2■□□□□ 0.02
PNKP-225ENST00000636214 J3QLI3 93 aa15.19■□□□□ 0.02
PNKP-225ENST00000636214 UBOX5O94941 541 aa15.19■□□□□ 0.02
PNKP-225ENST00000636214 PPP1R3DO95685 299 aa15.19■□□□□ 0.02
PNKP-225ENST00000636214 TXNDC12O95881 172 aa15.19■□□□□ 0.02
PNKP-225ENST00000636214 HSD17B1P14061 328 aa15.19■□□□□ 0.02
PNKP-225ENST00000636214 KITLGP21583 273 aa15.19■□□□□ 0.02
PNKP-225ENST00000636214 GATA3P23771 443 aa15.19■□□□□ 0.02
PNKP-225ENST00000636214 SEC23BQ15437 767 aa15.19■□□□□ 0.02
PNKP-225ENST00000636214 LEG1Q6P5S2 330 aa15.19■□□□□ 0.02
PNKP-225ENST00000636214 C16orf89Q6UX73 402 aa15.19■□□□□ 0.02
PNKP-225ENST00000636214 PTCHD4Q6ZW05 846 aa15.19■□□□□ 0.02
PNKP-225ENST00000636214 PGAM4Q8N0Y7 254 aa15.19■□□□□ 0.02
PNKP-225ENST00000636214 SPICQ8N5J4 248 aa15.19■□□□□ 0.02
PNKP-225ENST00000636214 GJC3Q8NFK1 279 aa15.19■□□□□ 0.02
PNKP-225ENST00000636214 DHRS1Q96LJ7 313 aa15.19■□□□□ 0.02
PNKP-225ENST00000636214 OR52D1Q9H346 318 aa15.19■□□□□ 0.02
PNKP-225ENST00000636214 TAGLN3Q9UI15 199 aa15.19■□□□□ 0.02
PNKP-225ENST00000636214 STARD10Q9Y365 291 aa15.19■□□□□ 0.02
PNKP-225ENST00000636214 NPTNQ9Y639 398 aa15.19■□□□□ 0.02
PNKP-225ENST00000636214 IMPA2O14732 288 aa15.18■□□□□ 0.02
PNKP-225ENST00000636214 DEAF1O75398 565 aaPredicted RBP15.18■□□□□ 0.02
PNKP-225ENST00000636214 CDKN2AP42771 156 aaKnown RBP15.18■□□□□ 0.02
PNKP-225ENST00000636214 CDK5R2Q13319 367 aa15.18■□□□□ 0.02
PNKP-225ENST00000636214 SLC36A3Q495N2 470 aa15.18■□□□□ 0.02
PNKP-225ENST00000636214 TMEM255AQ5JRV8 349 aa15.18■□□□□ 0.02
PNKP-225ENST00000636214 SLC7A6Q92536 515 aa15.18■□□□□ 0.02
PNKP-225ENST00000636214 SAMD8Q96LT4 415 aa15.18■□□□□ 0.02
PNKP-225ENST00000636214 CDRT15Q96T59 188 aa15.18■□□□□ 0.02
PNKP-225ENST00000636214 CDADC1Q9BWV3 514 aa15.18■□□□□ 0.02
PNKP-225ENST00000636214 HDHD2Q9H0R4 259 aa15.18■□□□□ 0.02
PNKP-225ENST00000636214 G6PC2Q9NQR9 355 aa15.18■□□□□ 0.02
PNKP-225ENST00000636214 TMEM106BQ9NUM4 274 aa15.18■□□□□ 0.02
PNKP-225ENST00000636214 KLHL21Q9UJP4 597 aa15.18■□□□□ 0.02
PNKP-225ENST00000636214 LOC105371242A0A075B767 164 aa15.17■□□□□ 0.02
PNKP-225ENST00000636214 ARPC2O15144 300 aa15.17■□□□□ 0.02
PNKP-225ENST00000636214 RER1O15258 196 aa15.17■□□□□ 0.02
PNKP-225ENST00000636214 DCTN3O75935 186 aa15.17■□□□□ 0.02
PNKP-225ENST00000636214 HLA-DQA2P01906 255 aa15.17■□□□□ 0.02
PNKP-225ENST00000636214 SBK2P0C263 348 aa15.17■□□□□ 0.02
PNKP-225ENST00000636214 RAC2P15153 192 aa15.17■□□□□ 0.02
PNKP-225ENST00000636214 EPHA1P21709 976 aa15.17■□□□□ 0.02
PNKP-225ENST00000636214 FPR3P25089 353 aa15.17■□□□□ 0.02
PNKP-225ENST00000636214 GNGT1P63211 74 aa15.17■□□□□ 0.02
PNKP-225ENST00000636214 RFX4Q33E94 735 aa15.17■□□□□ 0.02
PNKP-225ENST00000636214 CCDC92Q53HC0 331 aaPredicted RBP15.17■□□□□ 0.02
PNKP-225ENST00000636214 OTPQ5XKR4 325 aa15.17■□□□□ 0.02
PNKP-225ENST00000636214 SLC27A4Q6P1M0 643 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms