RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 OR2T2Q6IF00 324 aa10.74□□□□□ -0.69
LINC00339-206ENST00000634451 FIP1L1Q6UN15 594 aaKnown RBP10.74□□□□□ -0.69
LINC00339-206ENST00000634451 CCDC80Q76M96 950 aa10.74□□□□□ -0.69
LINC00339-206ENST00000634451 HDDC2Q7Z4H3 204 aa10.74□□□□□ -0.69
LINC00339-206ENST00000634451 MOGAT3Q86VF5 341 aa10.74□□□□□ -0.69
LINC00339-206ENST00000634451 LRRC8CQ8TDW0 803 aa10.74□□□□□ -0.69
LINC00339-206ENST00000634451 MEGF10Q96KG7 1140 aa10.74□□□□□ -0.69
LINC00339-206ENST00000634451 WDR76Q9H967 626 aa10.74□□□□□ -0.69
LINC00339-206ENST00000634451 ELOVL3Q9HB03 270 aa10.74□□□□□ -0.69
LINC00339-206ENST00000634451 MAN2C1Q9NTJ4 1040 aa10.74□□□□□ -0.69
LINC00339-206ENST00000634451 C1RLQ9NZP8 487 aa10.74□□□□□ -0.69
LINC00339-206ENST00000634451 CGGBP1Q9UFW8 167 aaPredicted RBP10.74□□□□□ -0.69
LINC00339-206ENST00000634451 A4GNTQ9UNA3 340 aa10.74□□□□□ -0.69
LINC00339-206ENST00000634451 MED31Q9Y3C7 131 aa10.74□□□□□ -0.69
LINC00339-206ENST00000634451 NPIPB13A6NJU9 1138 aa10.73□□□□□ -0.69
LINC00339-206ENST00000634451 NPIPB4C9JG80 1138 aa10.73□□□□□ -0.69
LINC00339-206ENST00000634451 KNG1P01042 644 aa10.73□□□□□ -0.69
LINC00339-206ENST00000634451 HLA-DPB1P04440 258 aa10.73□□□□□ -0.69
LINC00339-206ENST00000634451 CTLA4P16410 223 aa10.73□□□□□ -0.69
LINC00339-206ENST00000634451 TNFRSF1AP19438 455 aa10.73□□□□□ -0.69
LINC00339-206ENST00000634451 GSTM3P21266 225 aa10.73□□□□□ -0.69
LINC00339-206ENST00000634451 ANOS1P23352 680 aa10.73□□□□□ -0.69
LINC00339-206ENST00000634451 MTNR1AP48039 350 aa10.73□□□□□ -0.69
LINC00339-206ENST00000634451 CCDC92Q53HC0 331 aaPredicted RBP10.73□□□□□ -0.69
LINC00339-206ENST00000634451 MESTQ5EB52 335 aa10.73□□□□□ -0.69
LINC00339-206ENST00000634451 ZMAT1Q5H9K5 638 aa10.73□□□□□ -0.69
LINC00339-206ENST00000634451 NANOGP8Q6NSW7 305 aa10.73□□□□□ -0.69
LINC00339-206ENST00000634451 TBPL2Q6SJ96 375 aa10.73□□□□□ -0.69
LINC00339-206ENST00000634451 CALHM3Q86XJ0 350 aa10.73□□□□□ -0.69
LINC00339-206ENST00000634451 SLC30A8Q8IWU4 369 aa10.73□□□□□ -0.69
LINC00339-206ENST00000634451 NRMQ8IXM6 262 aa10.73□□□□□ -0.69
LINC00339-206ENST00000634451 ALDH16A1Q8IZ83 802 aa10.73□□□□□ -0.69
LINC00339-206ENST00000634451 ATG16L2Q8NAA4 619 aa10.73□□□□□ -0.69
LINC00339-206ENST00000634451 BHLHE23Q8NDY6 225 aa10.73□□□□□ -0.69
LINC00339-206ENST00000634451 RAB40AQ8WXH6 277 aa10.73□□□□□ -0.69
LINC00339-206ENST00000634451 HAVCR1Q96D42 359 aa10.73□□□□□ -0.69
LINC00339-206ENST00000634451 BPIFA2Q96DR5 249 aa10.73□□□□□ -0.69
LINC00339-206ENST00000634451 Q96M85 177 aa10.73□□□□□ -0.69
LINC00339-206ENST00000634451 RBP7Q96R05 134 aa10.73□□□□□ -0.69
LINC00339-206ENST00000634451 TBCCD1Q9NVR7 557 aa10.73□□□□□ -0.69
LINC00339-206ENST00000634451 IL19Q9UHD0 177 aa10.73□□□□□ -0.69
LINC00339-206ENST00000634451 LRCH1Q9Y2L9 728 aa10.73□□□□□ -0.69
LINC00339-206ENST00000634451 SRRM5B3KS81 715 aa10.72□□□□□ -0.69
LINC00339-206ENST00000634451 CDC42EP2O14613 210 aa10.72□□□□□ -0.69
LINC00339-206ENST00000634451 FFAR1O14842 300 aa10.72□□□□□ -0.69
LINC00339-206ENST00000634451 RER1O15258 196 aa10.72□□□□□ -0.69
LINC00339-206ENST00000634451 SGCEO43556 437 aa10.72□□□□□ -0.69
LINC00339-206ENST00000634451 FCN3O75636 299 aa10.72□□□□□ -0.69
LINC00339-206ENST00000634451 TSPAN15O95858 294 aa10.72□□□□□ -0.69
LINC00339-206ENST00000634451 TNFSF4P23510 183 aa10.72□□□□□ -0.69
LINC00339-206ENST00000634451 GPR4P46093 362 aa10.72□□□□□ -0.69
LINC00339-206ENST00000634451 GNB2P62879 340 aa10.72□□□□□ -0.69
LINC00339-206ENST00000634451 SF3A3Q12874 501 aaKnown RBP eCLIP10.72□□□□□ -0.69
LINC00339-206ENST00000634451 LRRC23Q53EV4 343 aaPredicted RBP10.72□□□□□ -0.69
LINC00339-206ENST00000634451 CYBRD1Q53TN4 286 aa10.72□□□□□ -0.69
LINC00339-206ENST00000634451 SLC27A4Q6P1M0 643 aa10.72□□□□□ -0.69
LINC00339-206ENST00000634451 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.72□□□□□ -0.69
LINC00339-206ENST00000634451 CROCCP2Q86T23 111 aa10.72□□□□□ -0.69
LINC00339-206ENST00000634451 FITM2Q8N6M3 262 aa10.72□□□□□ -0.69
LINC00339-206ENST00000634451 NPEPL1Q8NDH3 523 aa10.72□□□□□ -0.69
LINC00339-206ENST00000634451 C10orf82Q8WW14 230 aa10.72□□□□□ -0.69
LINC00339-206ENST00000634451 RASD2Q96D21 266 aa10.72□□□□□ -0.69
LINC00339-206ENST00000634451 CCT8L2Q96SF2 557 aa10.72□□□□□ -0.69
LINC00339-206ENST00000634451 CITED1Q99966 193 aa10.72□□□□□ -0.69
LINC00339-206ENST00000634451 NUDT16L1Q9BRJ7 211 aaKnown RBP10.72□□□□□ -0.69
LINC00339-206ENST00000634451 STX18Q9P2W9 335 aaKnown RBP10.72□□□□□ -0.69
LINC00339-206ENST00000634451 CTSZQ9UBR2 303 aa10.72□□□□□ -0.69
LINC00339-206ENST00000634451 NDRG4Q9ULP0 352 aaKnown RBP10.72□□□□□ -0.69
LINC00339-206ENST00000634451 MMP24Q9Y5R2 645 aa10.72□□□□□ -0.69
LINC00339-206ENST00000634451 OR6C6A6NF89 314 aa10.71□□□□□ -0.69
LINC00339-206ENST00000634451 C12orf71A8MTZ7 269 aa10.71□□□□□ -0.69
LINC00339-206ENST00000634451 IGF2P01344 180 aa10.71□□□□□ -0.69
LINC00339-206ENST00000634451 MELTFP08582 738 aa10.71□□□□□ -0.69
LINC00339-206ENST00000634451 PITPNBP48739 271 aa10.71□□□□□ -0.69
LINC00339-206ENST00000634451 SLC9A3P48764 834 aa10.71□□□□□ -0.69
LINC00339-206ENST00000634451 PCBD1P61457 104 aa10.71□□□□□ -0.69
LINC00339-206ENST00000634451 PRB3Q04118 309 aaPredicted RBP10.71□□□□□ -0.69
LINC00339-206ENST00000634451 MEP1BQ16820 701 aa10.71□□□□□ -0.69
LINC00339-206ENST00000634451 ZNF404Q494X3 552 aa10.71□□□□□ -0.69
LINC00339-206ENST00000634451 TTMPQ5BVD1 217 aa10.71□□□□□ -0.69
LINC00339-206ENST00000634451 INTS11Q5TA45 600 aaKnown RBP10.71□□□□□ -0.69
LINC00339-206ENST00000634451 PRAMEF6Q5VXH4 476 aa10.71□□□□□ -0.69
LINC00339-206ENST00000634451 OLFML2AQ68BL7 652 aa10.71□□□□□ -0.69
LINC00339-206ENST00000634451 ASPHD2Q6ICH7 369 aa10.71□□□□□ -0.69
LINC00339-206ENST00000634451 BRICD5Q6PL45 260 aa10.71□□□□□ -0.69
LINC00339-206ENST00000634451 BTNL3Q6UXE8 466 aa10.71□□□□□ -0.69
LINC00339-206ENST00000634451 LRRN1Q6UXK5 716 aa10.71□□□□□ -0.69
LINC00339-206ENST00000634451 UNQ6126/PRO20091Q6UXV3 157 aa10.71□□□□□ -0.69
LINC00339-206ENST00000634451 ZNF841Q6ZN19 808 aa10.71□□□□□ -0.69
LINC00339-206ENST00000634451 VTCN1Q7Z7D3 282 aa10.71□□□□□ -0.69
LINC00339-206ENST00000634451 MUC20Q8N307 709 aaPredicted RBP10.71□□□□□ -0.69
LINC00339-206ENST00000634451 ZDHHC16Q969W1 377 aa10.71□□□□□ -0.69
LINC00339-206ENST00000634451 NEIL1Q96FI4 390 aaPredicted RBP10.71□□□□□ -0.69
LINC00339-206ENST00000634451 TPD52L3Q96J77 140 aa10.71□□□□□ -0.69
LINC00339-206ENST00000634451 ZNF583Q96ND8 569 aa10.71□□□□□ -0.69
LINC00339-206ENST00000634451 TBX15Q96SF7 602 aa10.71□□□□□ -0.69
LINC00339-206ENST00000634451 PCGF1Q9BSM1 259 aa10.71□□□□□ -0.69
LINC00339-206ENST00000634451 RERGLQ9H628 205 aa10.71□□□□□ -0.69
LINC00339-206ENST00000634451 ASH2LQ9UBL3 628 aa10.71□□□□□ -0.69
LINC00339-206ENST00000634451 KIR2DS1A0A191URI9 304 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms