RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 FAM117AQ9C073 453 aa7.84□□□□□ -1.15
VCL-207ENST00000624354 C1orf198Q9H425 327 aa7.84□□□□□ -1.15
VCL-207ENST00000624354 KCNK15Q9H427 330 aa7.84□□□□□ -1.15
VCL-207ENST00000624354 ELOVL3Q9HB03 270 aa7.84□□□□□ -1.15
VCL-207ENST00000624354 KCNG2Q9UJ96 466 aa7.84□□□□□ -1.15
VCL-207ENST00000624354 RIF1Q5UIP0 2472 aaKnown RBP7.84□□□□□ -1.15
VCL-207ENST00000624354 SCDO00767 359 aa7.84□□□□□ -1.15
VCL-207ENST00000624354 XKRYO14609 159 aa7.84□□□□□ -1.15
VCL-207ENST00000624354 KLK3P07288 261 aaPredicted RBP7.84□□□□□ -1.15
VCL-207ENST00000624354 ST6GAL1P15907 406 aa7.84□□□□□ -1.15
VCL-207ENST00000624354 ABOP16442 354 aa7.84□□□□□ -1.15
VCL-207ENST00000624354 COL9A1P20849 921 aa7.84□□□□□ -1.15
VCL-207ENST00000624354 GPX4P36969 197 aaPredicted RBP7.84□□□□□ -1.15
VCL-207ENST00000624354 BTG2P78543 158 aa7.84□□□□□ -1.15
VCL-207ENST00000624354 EGR4Q05215 589 aa7.84□□□□□ -1.15
VCL-207ENST00000624354 FUT7Q11130 342 aa7.84□□□□□ -1.15
VCL-207ENST00000624354 MEP1BQ16820 701 aa7.84□□□□□ -1.15
VCL-207ENST00000624354 C10orf91Q5T1B1 145 aa7.84□□□□□ -1.15
VCL-207ENST00000624354 GLT8D1Q68CQ7 371 aa7.84□□□□□ -1.15
VCL-207ENST00000624354 TMEM184AQ6ZMB5 413 aa7.84□□□□□ -1.15
VCL-207ENST00000624354 MED25Q71SY5 747 aa7.84□□□□□ -1.15
VCL-207ENST00000624354 TAF8Q7Z7C8 310 aa7.84□□□□□ -1.15
VCL-207ENST00000624354 BIVMQ86UB2 503 aa7.84□□□□□ -1.15
VCL-207ENST00000624354 TCTEX1D2Q8WW35 142 aa7.84□□□□□ -1.15
VCL-207ENST00000624354 KTI12Q96EK9 354 aaPredicted RBP7.84□□□□□ -1.15
VCL-207ENST00000624354 PHYHIPLQ96FC7 376 aa7.84□□□□□ -1.15
VCL-207ENST00000624354 LMF1Q96S06 567 aa7.84□□□□□ -1.15
VCL-207ENST00000624354 AMELYQ99218 206 aa7.84□□□□□ -1.15
VCL-207ENST00000624354 CKLFQ9UBR5 152 aa7.84□□□□□ -1.15
VCL-207ENST00000624354 PRODH2Q9UF12 536 aa7.84□□□□□ -1.15
VCL-207ENST00000624354 TRAV14DV4A0A0A6YYC5 116 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 OIP5O43482 229 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 GPANK1O95872 356 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 AMY2AP04746 511 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 CD2P06729 351 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 IGLV3-21P80748 117 aaPredicted RBP7.83□□□□□ -1.16
VCL-207ENST00000624354 DMWDQ09019 674 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 SKP2Q13309 424 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 TOMM20Q15388 145 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 BEND4Q6ZU67 534 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 ZNF627Q7L945 461 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 KCNRGQ8N5I3 272 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 TMEM229BQ8NBD8 167 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 PLPP7Q8NBV4 271 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 STEAP2Q8NFT2 490 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 PHOSPHO2Q8TCD6 241 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 SLC37A2Q8TED4 501 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 EDAQ92838 391 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 OR8B4Q96RC9 309 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 WDR13Q9H1Z4 485 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 COMMD9Q9P000 198 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 DHDHQ9UQ10 334 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 DMRT1Q9Y5R6 373 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 A0A1W2PQF6 199 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 BLACEA4D250 179 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 COLCA2A8K830 154 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 ZNF264O43296 627 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 BCL2L11O43521 198 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 PRKNO60260 465 aaPredicted RBP7.83□□□□□ -1.16
VCL-207ENST00000624354 OR6A2O95222 327 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 CYB5AP00167 134 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 MAOAP21397 527 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 ABCD3P28288 659 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 TACR3P29371 465 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 PPT1P50897 306 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 SLC17A1Q14916 467 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 LY6G6FQ5SQ64 297 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 JMJD6Q6NYC1 403 aaPredicted RBP7.83□□□□□ -1.16
VCL-207ENST00000624354 FDX2Q6P4F2 183 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 SLC35D2Q76EJ3 337 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 PARGQ86W56 976 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 SFTPA2Q8IWL1 248 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 OR1J4Q8NGS1 313 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 STK35Q8TDR2 534 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 ASB17Q8WXJ9 295 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 ARL11Q969Q4 196 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 ELSPBP1Q96BH3 223 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 SEH1LQ96EE3 360 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 ELF4Q99607 663 aaPredicted RBP7.83□□□□□ -1.16
VCL-207ENST00000624354 GAL3ST1Q99999 423 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 SLCO5A1Q9H2Y9 848 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 SEMA6CQ9H3T2 930 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 MSRAQ9UJ68 235 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 SLC22A13Q9Y226 551 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 KIR2DS5A0A0G2JLQ3 304 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 A0A0G2JNG1 304 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 OR5H14A6NHG9 310 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 RHPN2P1A8MT19 583 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 KIR2DS3K7RE56 304 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 M0QYG6 137 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 KLF8O95600 359 aaPredicted RBP7.83□□□□□ -1.16
VCL-207ENST00000624354 TNFP01375 233 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 HTR2CP28335 458 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 P2RY4P51582 365 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 YPEL5P62699 121 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 BIKQ13323 160 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 KIR2DS5Q14953 304 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 BEX5Q5H9J7 111 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 FNDC7Q5VTL7 733 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 LPCAT3Q6P1A2 487 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms