RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 ZNF813Q6ZN06 617 aa9.32□□□□□ -0.92
VPS11-208ENST00000621676 PXKQ7Z7A4 578 aa9.32□□□□□ -0.92
VPS11-208ENST00000621676 MISPQ8IVT2 679 aa9.32□□□□□ -0.92
VPS11-208ENST00000621676 MFSD4AQ8N468 514 aa9.32□□□□□ -0.92
VPS11-208ENST00000621676 ZNF485Q8NCK3 441 aa9.32□□□□□ -0.92
VPS11-208ENST00000621676 PMM1Q92871 262 aa9.32□□□□□ -0.92
VPS11-208ENST00000621676 SLC25A46Q96AG3 418 aa9.32□□□□□ -0.92
VPS11-208ENST00000621676 SMIM19Q96E16 107 aa9.32□□□□□ -0.92
VPS11-208ENST00000621676 ZC3HAV1LQ96H79 300 aaKnown RBP9.32□□□□□ -0.92
VPS11-208ENST00000621676 DDA1Q9BW61 102 aa9.32□□□□□ -0.92
VPS11-208ENST00000621676 GLTPQ9NZD2 209 aa9.32□□□□□ -0.92
VPS11-208ENST00000621676 PRSS50Q9UI38 385 aa9.32□□□□□ -0.92
VPS11-208ENST00000621676 ST6GALNAC2Q9UJ37 374 aa9.32□□□□□ -0.92
VPS11-208ENST00000621676 BAIAP2Q9UQB8 552 aa9.32□□□□□ -0.92
VPS11-208ENST00000621676 HSPB6O14558 160 aa9.31□□□□□ -0.92
VPS11-208ENST00000621676 ZNF121P58317 390 aaPredicted RBP9.31□□□□□ -0.92
VPS11-208ENST00000621676 ZSWIM7Q19AV6 140 aa9.31□□□□□ -0.92
VPS11-208ENST00000621676 GLYATL3Q5SZD4 288 aa9.31□□□□□ -0.92
VPS11-208ENST00000621676 CREB3L2Q70SY1 520 aa9.31□□□□□ -0.92
VPS11-208ENST00000621676 CISD2Q8N5K1 135 aaKnown RBP9.31□□□□□ -0.92
VPS11-208ENST00000621676 OR52N1Q8NH53 320 aa9.31□□□□□ -0.92
VPS11-208ENST00000621676 OR52N5Q8NH56 324 aa9.31□□□□□ -0.92
VPS11-208ENST00000621676 MAFIPQ8WZ33 124 aa9.31□□□□□ -0.92
VPS11-208ENST00000621676 RADILQ96JH8 1075 aa9.31□□□□□ -0.92
VPS11-208ENST00000621676 MMP27Q9H306 513 aa9.31□□□□□ -0.92
VPS11-208ENST00000621676 PLEKHA1Q9HB21 404 aa9.31□□□□□ -0.92
VPS11-208ENST00000621676 SLC7A10Q9NS82 523 aa9.31□□□□□ -0.92
VPS11-208ENST00000621676 PCSK5Q92824 1860 aa9.31□□□□□ -0.92
VPS11-208ENST00000621676 ANKHD1Q8IWZ3 2542 aaKnown RBP9.31□□□□□ -0.92
VPS11-208ENST00000621676 SYT7O43581 403 aa9.31□□□□□ -0.92
VPS11-208ENST00000621676 TACSTD2P09758 323 aa9.31□□□□□ -0.92
VPS11-208ENST00000621676 FAM157BP0CG42 384 aa9.31□□□□□ -0.92
VPS11-208ENST00000621676 FAHP16930 419 aa9.31□□□□□ -0.92
VPS11-208ENST00000621676 CRABP1P29762 137 aa9.31□□□□□ -0.92
VPS11-208ENST00000621676 SLC35A1P78382 337 aa9.31□□□□□ -0.92
VPS11-208ENST00000621676 GUCA2AQ02747 115 aa9.31□□□□□ -0.92
VPS11-208ENST00000621676 SLC17A1Q14916 467 aa9.31□□□□□ -0.92
VPS11-208ENST00000621676 NUFIP2Q7Z417 695 aaKnown RBP9.31□□□□□ -0.92
VPS11-208ENST00000621676 OR5AS1Q8N127 324 aa9.31□□□□□ -0.92
VPS11-208ENST00000621676 GTPBP8Q8N3Z3 284 aaPredicted RBP9.31□□□□□ -0.92
VPS11-208ENST00000621676 ZNF519Q8TB69 540 aa9.31□□□□□ -0.92
VPS11-208ENST00000621676 KLK11Q9UBX7 282 aa9.31□□□□□ -0.92
VPS11-208ENST00000621676 DHDHQ9UQ10 334 aa9.31□□□□□ -0.92
VPS11-208ENST00000621676 TLN2Q9Y4G6 2542 aa9.31□□□□□ -0.92
VPS11-208ENST00000621676 CSPG4Q6UVK1 2322 aa9.31□□□□□ -0.92
VPS11-208ENST00000621676 HIVEP3Q5T1R4 2406 aa9.31□□□□□ -0.92
VPS11-208ENST00000621676 LOC107986453A0A1B0GWG9 222 aa9.31□□□□□ -0.92
VPS11-208ENST00000621676 TLX3O43711 291 aaPredicted RBP9.31□□□□□ -0.92
VPS11-208ENST00000621676 ANGPTL7O43827 346 aa9.31□□□□□ -0.92
VPS11-208ENST00000621676 RAC1P63000 192 aa9.31□□□□□ -0.92
VPS11-208ENST00000621676 CBX3Q13185 183 aa9.31□□□□□ -0.92
VPS11-208ENST00000621676 CLN3Q13286 438 aa9.31□□□□□ -0.92
VPS11-208ENST00000621676 ALKBH6Q3KRA9 238 aa9.31□□□□□ -0.92
VPS11-208ENST00000621676 TRIQKQ629K1 86 aa9.31□□□□□ -0.92
VPS11-208ENST00000621676 PIP4P1Q86T03 277 aa9.31□□□□□ -0.92
VPS11-208ENST00000621676 MED12LQ86YW9 2145 aa9.31□□□□□ -0.92
VPS11-208ENST00000621676 ZNF101Q8IZC7 436 aa9.31□□□□□ -0.92
VPS11-208ENST00000621676 STK35Q8TDR2 534 aa9.31□□□□□ -0.92
VPS11-208ENST00000621676 HPS1Q92902 700 aa9.31□□□□□ -0.92
VPS11-208ENST00000621676 PGAM5Q96HS1 289 aa9.31□□□□□ -0.92
VPS11-208ENST00000621676 OXGR1Q96P68 337 aa9.31□□□□□ -0.92
VPS11-208ENST00000621676 KCNK17Q96T54 332 aa9.31□□□□□ -0.92
VPS11-208ENST00000621676 GPR87Q9BY21 358 aa9.31□□□□□ -0.92
VPS11-208ENST00000621676 NMNAT2Q9BZQ4 307 aa9.31□□□□□ -0.92
VPS11-208ENST00000621676 SPRY4Q9C004 299 aa9.31□□□□□ -0.92
VPS11-208ENST00000621676 ZNF281Q9Y2X9 895 aa9.31□□□□□ -0.92
VPS11-208ENST00000621676 BSNQ9UPA5 3926 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 FAM230AA0A1W2PPH8 454 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 AGFG2O95081 481 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 ADRA2CP18825 462 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 CNR1P21554 472 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 POU3F4P49335 361 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 RPS11P62280 158 aaKnown RBP eCLIP9.3□□□□□ -0.92
VPS11-208ENST00000621676 ACTC1P68032 377 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 ACTA1P68133 377 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 SLC22A6Q4U2R8 563 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 PRR30Q53SZ7 412 aaPredicted RBP9.3□□□□□ -0.92
VPS11-208ENST00000621676 VHLLQ6RSH7 139 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 PAMR1Q6UXH9 720 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 GPALPP1Q8IXQ4 340 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 C20orf196Q8IYI0 205 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 C19orf18Q8NEA5 215 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 ABHD1Q96SE0 405 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 ZPBPQ9BS86 351 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 AKIP1Q9NQ31 210 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 GPR84Q9NQS5 396 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 OR52A1Q9UKL2 312 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 PCDHGB2Q9Y5G2 931 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 FKBP7Q9Y680 259 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 LHFPL6Q9Y693 200 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 FASNP49327 2511 aaKnown RBP9.3□□□□□ -0.92
VPS11-208ENST00000621676 ZNF879B4DU55 563 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 J3QRE1 110 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 HCKP08631 526 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 NAGAP17050 411 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 TALDO1P37837 337 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 EIF1P41567 113 aaKnown RBP9.3□□□□□ -0.92
VPS11-208ENST00000621676 HTR5AP47898 357 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 SCN1BQ07699 218 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 ZNF79Q15937 498 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms