RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 SMPD3Q9NY59 655 aaPredicted RBP16.05■□□□□ 0.16
CIRBP-245ENST00000621399 EIF3KQ9UBQ5 218 aaKnown RBP16.05■□□□□ 0.16
CIRBP-245ENST00000621399 LAMP3Q9UQV4 416 aa16.05■□□□□ 0.16
CIRBP-245ENST00000621399 GMPPBQ9Y5P6 360 aa16.05■□□□□ 0.16
CIRBP-245ENST00000621399 OR6C6A6NF89 314 aa16.04■□□□□ 0.16
CIRBP-245ENST00000621399 CASQ2O14958 399 aaPredicted RBP16.04■□□□□ 0.16
CIRBP-245ENST00000621399 SYNGR3O43761 229 aa16.04■□□□□ 0.16
CIRBP-245ENST00000621399 SOD3P08294 240 aa16.04■□□□□ 0.16
CIRBP-245ENST00000621399 DANCRP0C864 163 aa16.04■□□□□ 0.16
CIRBP-245ENST00000621399 CD53P19397 219 aa16.04■□□□□ 0.16
CIRBP-245ENST00000621399 RAD52P43351 418 aa16.04■□□□□ 0.16
CIRBP-245ENST00000621399 PCK2Q16822 640 aa16.04■□□□□ 0.16
CIRBP-245ENST00000621399 OGFRL1Q5TC84 451 aaPredicted RBP16.04■□□□□ 0.16
CIRBP-245ENST00000621399 LCN1P1Q5VSP4 162 aa16.04■□□□□ 0.16
CIRBP-245ENST00000621399 AADACL4Q5VUY2 407 aa16.04■□□□□ 0.16
CIRBP-245ENST00000621399 NXNL2Q5VZ03 156 aa16.04■□□□□ 0.16
CIRBP-245ENST00000621399 MEPCEQ7L2J0 689 aaKnown RBP16.04■□□□□ 0.16
CIRBP-245ENST00000621399 DCXRQ7Z4W1 244 aa16.04■□□□□ 0.16
CIRBP-245ENST00000621399 MUC15Q8N387 334 aa16.04■□□□□ 0.16
CIRBP-245ENST00000621399 OR6N2Q8NGY6 317 aa16.04■□□□□ 0.16
CIRBP-245ENST00000621399 TRUB1Q8WWH5 349 aaKnown RBP16.04■□□□□ 0.16
CIRBP-245ENST00000621399 NINJ1Q92982 152 aa16.04■□□□□ 0.16
CIRBP-245ENST00000621399 PIGTQ969N2 578 aa16.04■□□□□ 0.16
CIRBP-245ENST00000621399 RDH12Q96NR8 316 aa16.04■□□□□ 0.16
CIRBP-245ENST00000621399 TEAD3Q99594 435 aa16.04■□□□□ 0.16
CIRBP-245ENST00000621399 HDHD2Q9H0R4 259 aa16.04■□□□□ 0.16
CIRBP-245ENST00000621399 OR51B6Q9H340 312 aa16.04■□□□□ 0.16
CIRBP-245ENST00000621399 MARCH7Q9H992 704 aa16.04■□□□□ 0.16
CIRBP-245ENST00000621399 RNPEPL1Q9HAU8 725 aa16.04■□□□□ 0.16
CIRBP-245ENST00000621399 PDZD2O15018 2839 aa16.03■□□□□ 0.16
CIRBP-245ENST00000621399 OR4A8P0C604 315 aa16.03■□□□□ 0.16
CIRBP-245ENST00000621399 PSKH1P11801 424 aa16.03■□□□□ 0.16
CIRBP-245ENST00000621399 PCSK6P29122 969 aa16.03■□□□□ 0.16
CIRBP-245ENST00000621399 SERPINF1P36955 418 aa16.03■□□□□ 0.16
CIRBP-245ENST00000621399 UCP2P55851 309 aa16.03■□□□□ 0.16
CIRBP-245ENST00000621399 AGAP6Q5VW22 663 aa16.03■□□□□ 0.16
CIRBP-245ENST00000621399 ARL9Q6T311 187 aa16.03■□□□□ 0.16
CIRBP-245ENST00000621399 TIGD4Q8IY51 512 aa16.03■□□□□ 0.16
CIRBP-245ENST00000621399 ZNF555Q8NEP9 628 aa16.03■□□□□ 0.16
CIRBP-245ENST00000621399 TMEM171Q8WVE6 324 aa16.03■□□□□ 0.16
CIRBP-245ENST00000621399 SLC7A6Q92536 515 aa16.03■□□□□ 0.16
CIRBP-245ENST00000621399 UBE2FQ969M7 185 aa16.03■□□□□ 0.16
CIRBP-245ENST00000621399 MAP6Q96JE9 813 aa16.03■□□□□ 0.16
CIRBP-245ENST00000621399 C4orf45Q96LM5 186 aa16.03■□□□□ 0.16
CIRBP-245ENST00000621399 COQ7Q99807 217 aa16.03■□□□□ 0.16
CIRBP-245ENST00000621399 ZNF442Q9H7R0 627 aa16.03■□□□□ 0.16
CIRBP-245ENST00000621399 FAM118AQ9NWS6 357 aa16.03■□□□□ 0.16
CIRBP-245ENST00000621399 ATPIF1Q9UII2 106 aa16.03■□□□□ 0.16
CIRBP-245ENST00000621399 AKAP6Q13023 2319 aa16.02■□□□□ 0.16
CIRBP-245ENST00000621399 LOC100130705A0A1B0GUX0 176 aa16.02■□□□□ 0.16
CIRBP-245ENST00000621399 CCDC182A6NF36 153 aa16.02■□□□□ 0.16
CIRBP-245ENST00000621399 E9PQ18 207 aa16.02■□□□□ 0.16
CIRBP-245ENST00000621399 GPRIN2O60269 458 aa16.02■□□□□ 0.16
CIRBP-245ENST00000621399 SELENOFO60613 162 aa16.02■□□□□ 0.16
CIRBP-245ENST00000621399 LCKP06239 509 aa16.02■□□□□ 0.16
CIRBP-245ENST00000621399 GLRXP35754 106 aa16.02■□□□□ 0.16
CIRBP-245ENST00000621399 WNT5AP41221 380 aa16.02■□□□□ 0.16
CIRBP-245ENST00000621399 NAA10P41227 235 aaPredicted RBP16.02■□□□□ 0.16
CIRBP-245ENST00000621399 RPS23P62266 143 aaKnown RBP16.02■□□□□ 0.16
CIRBP-245ENST00000621399 ECH1Q13011 328 aa16.02■□□□□ 0.16
CIRBP-245ENST00000621399 EIF2B1Q14232 305 aaKnown RBP16.02■□□□□ 0.16
CIRBP-245ENST00000621399 ADIPOQQ15848 244 aa16.02■□□□□ 0.16
CIRBP-245ENST00000621399 UNQ6126/PRO20091Q6UXV3 157 aa16.02■□□□□ 0.16
CIRBP-245ENST00000621399 SHFQ7M4L6 423 aa16.02■□□□□ 0.16
CIRBP-245ENST00000621399 DPY19L4Q7Z388 723 aa16.02■□□□□ 0.16
CIRBP-245ENST00000621399 GID4Q8IVV7 300 aa16.02■□□□□ 0.16
CIRBP-245ENST00000621399 ATF6BQ99941 703 aa16.02■□□□□ 0.16
CIRBP-245ENST00000621399 BCL2L14Q9BZR8 327 aa16.02■□□□□ 0.16
CIRBP-245ENST00000621399 GRIP1Q9Y3R0 1128 aa16.02■□□□□ 0.16
CIRBP-245ENST00000621399 CMAHPQ9Y471 501 aa16.02■□□□□ 0.16
CIRBP-245ENST00000621399 SLC22A31A6NKX4 558 aa16.01■□□□□ 0.15
CIRBP-245ENST00000621399 DLGAP1O14490 977 aa16.01■□□□□ 0.15
CIRBP-245ENST00000621399 ABHD16AO95870 558 aa16.01■□□□□ 0.15
CIRBP-245ENST00000621399 DBHP09172 617 aa16.01■□□□□ 0.15
CIRBP-245ENST00000621399 DTX2Q86UW9 622 aa16.01■□□□□ 0.15
CIRBP-245ENST00000621399 ZNF101Q8IZC7 436 aa16.01■□□□□ 0.15
CIRBP-245ENST00000621399 SLAMF6Q96DU3 332 aa16.01■□□□□ 0.15
CIRBP-245ENST00000621399 DCLRE1CQ96SD1 692 aaKnown RBP16.01■□□□□ 0.15
CIRBP-245ENST00000621399 TRAF4Q9BUZ4 470 aaPredicted RBP16.01■□□□□ 0.15
CIRBP-245ENST00000621399 VCXQ9H320 206 aa16.01■□□□□ 0.15
CIRBP-245ENST00000621399 CXorf56Q9H5V9 222 aa16.01■□□□□ 0.15
CIRBP-245ENST00000621399 ELOVL3Q9HB03 270 aa16.01■□□□□ 0.15
CIRBP-245ENST00000621399 PNRC2Q9NPJ4 139 aaKnown RBP16.01■□□□□ 0.15
CIRBP-245ENST00000621399 CENPMQ9NSP4 180 aa16.01■□□□□ 0.15
CIRBP-245ENST00000621399 CBLN4Q9NTU7 201 aa16.01■□□□□ 0.15
CIRBP-245ENST00000621399 DNAJC27Q9NZQ0 273 aa16.01■□□□□ 0.15
CIRBP-245ENST00000621399 ANKRD17O75179 2603 aaKnown RBP16.01■□□□□ 0.15
CIRBP-245ENST00000621399 HEATR1Q9H583 2144 aaKnown RBP16.01■□□□□ 0.15
CIRBP-245ENST00000621399 CSMD2Q7Z408 3487 aa16■□□□□ 0.15
CIRBP-245ENST00000621399 SLC16A6O15403 523 aa16■□□□□ 0.15
CIRBP-245ENST00000621399 SMPD2O60906 423 aa16■□□□□ 0.15
CIRBP-245ENST00000621399 CD8AP01732 235 aa16■□□□□ 0.15
CIRBP-245ENST00000621399 MRPL3P09001 348 aaKnown RBP16■□□□□ 0.15
CIRBP-245ENST00000621399 SNRPGP62308 76 aaKnown RBP16■□□□□ 0.15
CIRBP-245ENST00000621399 TAF13Q15543 124 aa16■□□□□ 0.15
CIRBP-245ENST00000621399 RGS7BPQ6MZT1 257 aaPredicted RBP16■□□□□ 0.15
CIRBP-245ENST00000621399 SPATC1Q76KD6 591 aa16■□□□□ 0.15
CIRBP-245ENST00000621399 SLC16A9Q7RTY1 509 aa16■□□□□ 0.15
CIRBP-245ENST00000621399 ZNF454Q8N9F8 522 aa16■□□□□ 0.15
CIRBP-245ENST00000621399 OR10S1Q8NGN2 331 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms