RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 UBL3O95164 117 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 RPS27AP62979 156 aaKnown RBP10.34□□□□□ -0.75
CLIP1-219ENST00000620786 UBA52P62987 128 aaKnown RBP10.34□□□□□ -0.75
CLIP1-219ENST00000620786 SIGLEC14Q08ET2 396 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 AARDQ4LEZ3 155 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 CYHR1Q6ZMK1 362 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 SUMF1Q8NBK3 374 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 OR1S2Q8NGQ3 325 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 NANPQ8TBE9 248 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 ZNF707Q96C28 371 aaPredicted RBP10.34□□□□□ -0.75
CLIP1-219ENST00000620786 MRPS24Q96EL2 167 aaKnown RBP10.34□□□□□ -0.75
CLIP1-219ENST00000620786 ATF6BQ99941 703 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 HDGFL3Q9Y3E1 203 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 PRSS37A4D1T9 235 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 BOLA2-SMG1P6H3BVE0 249 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 BHLHE40O14503 412 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 GABRA4P48169 554 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 SUMO3P55854 103 aaPredicted RBP10.34□□□□□ -0.75
CLIP1-219ENST00000620786 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.34□□□□□ -0.75
CLIP1-219ENST00000620786 TMEM211Q6ICI0 200 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 LILRA6Q6PI73 481 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 SSX9Q7RTT3 188 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 PTRH1Q86Y79 214 aaKnown RBP10.34□□□□□ -0.75
CLIP1-219ENST00000620786 LAX1Q8IWV1 398 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 UBAC2Q8NBM4 344 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 OR1J1Q8NGS3 322 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 ONECUT1Q9UBC0 465 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 ASB1Q9Y576 335 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 CEPT1Q9Y6K0 416 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 A0A0B4J2A0 478 aa10.33□□□□□ -0.76
CLIP1-219ENST00000620786 CTDSP2O14595 271 aa10.33□□□□□ -0.76
CLIP1-219ENST00000620786 FCMRO60667 390 aa10.33□□□□□ -0.76
CLIP1-219ENST00000620786 SLC2A10O95528 541 aa10.33□□□□□ -0.76
CLIP1-219ENST00000620786 ADH4P08319 380 aa10.33□□□□□ -0.76
CLIP1-219ENST00000620786 OR10J4P0C629 311 aa10.33□□□□□ -0.76
CLIP1-219ENST00000620786 TBPP20226 339 aa10.33□□□□□ -0.76
CLIP1-219ENST00000620786 NXPH1P58417 271 aa10.33□□□□□ -0.76
CLIP1-219ENST00000620786 MCCD1P59942 119 aaPredicted RBP10.33□□□□□ -0.76
CLIP1-219ENST00000620786 SNRPGP62308 76 aaKnown RBP10.33□□□□□ -0.76
CLIP1-219ENST00000620786 SHBQ15464 509 aa10.33□□□□□ -0.76
CLIP1-219ENST00000620786 SSX2Q16385 188 aa10.33□□□□□ -0.76
CLIP1-219ENST00000620786 SPATA46Q5T0L3 261 aa10.33□□□□□ -0.76
CLIP1-219ENST00000620786 C1orf53Q5VUE5 145 aa10.33□□□□□ -0.76
CLIP1-219ENST00000620786 FUNDC1Q8IVP5 155 aa10.33□□□□□ -0.76
CLIP1-219ENST00000620786 OR5M11Q96RB7 305 aa10.33□□□□□ -0.76
CLIP1-219ENST00000620786 PDCD1LG2Q9BQ51 273 aa10.33□□□□□ -0.76
CLIP1-219ENST00000620786 CNTNAP3Q9BZ76 1288 aa10.33□□□□□ -0.76
CLIP1-219ENST00000620786 SHPKQ9UHJ6 478 aa10.33□□□□□ -0.76
CLIP1-219ENST00000620786 B3GALT5Q9Y2C3 310 aa10.33□□□□□ -0.76
CLIP1-219ENST00000620786 FZD6O60353 706 aa10.33□□□□□ -0.76
CLIP1-219ENST00000620786 CPEP16870 476 aa10.33□□□□□ -0.76
CLIP1-219ENST00000620786 F2RP25116 425 aa10.33□□□□□ -0.76
CLIP1-219ENST00000620786 RPS16P62249 146 aaKnown RBP10.33□□□□□ -0.76
CLIP1-219ENST00000620786 SPRED3Q2MJR0 410 aa10.33□□□□□ -0.76
CLIP1-219ENST00000620786 LSRQ86X29 649 aaPredicted RBP10.33□□□□□ -0.76
CLIP1-219ENST00000620786 OLIG1Q8TAK6 271 aa10.33□□□□□ -0.76
CLIP1-219ENST00000620786 OR2M2Q96R28 347 aa10.33□□□□□ -0.76
CLIP1-219ENST00000620786 ZCCHC4Q9H5U6 513 aa10.33□□□□□ -0.76
CLIP1-219ENST00000620786 K7EQM0 130 aa10.33□□□□□ -0.76
CLIP1-219ENST00000620786 SSX4O60224 188 aa10.33□□□□□ -0.76
CLIP1-219ENST00000620786 PRPH2P23942 346 aa10.33□□□□□ -0.76
CLIP1-219ENST00000620786 KDM4DQ6B0I6 523 aa10.33□□□□□ -0.76
CLIP1-219ENST00000620786 KCNIP4Q6PIL6 250 aa10.33□□□□□ -0.76
CLIP1-219ENST00000620786 ANKRD37Q7Z713 158 aa10.33□□□□□ -0.76
CLIP1-219ENST00000620786 CMTM4Q8IZR5 234 aa10.33□□□□□ -0.76
CLIP1-219ENST00000620786 OR4D9Q8NGE8 314 aa10.33□□□□□ -0.76
CLIP1-219ENST00000620786 GPR119Q8TDV5 335 aa10.33□□□□□ -0.76
CLIP1-219ENST00000620786 LIN37Q96GY3 246 aaPredicted RBP10.33□□□□□ -0.76
CLIP1-219ENST00000620786 TXNIPQ9H3M7 391 aa10.33□□□□□ -0.76
CLIP1-219ENST00000620786 GPR84Q9NQS5 396 aa10.33□□□□□ -0.76
CLIP1-219ENST00000620786 IGHV1OR21-1A0A087WYE8 117 aa10.33□□□□□ -0.76
CLIP1-219ENST00000620786 CISD3P0C7P0 127 aa10.33□□□□□ -0.76
CLIP1-219ENST00000620786 PCBP4P57723 403 aaKnown RBP10.33□□□□□ -0.76
CLIP1-219ENST00000620786 EBPQ15125 230 aaKnown RBP10.33□□□□□ -0.76
CLIP1-219ENST00000620786 TMEM81Q6P7N7 255 aa10.33□□□□□ -0.76
CLIP1-219ENST00000620786 KLHDC8BQ8IXV7 354 aa10.33□□□□□ -0.76
CLIP1-219ENST00000620786 GCNT2Q8N0V5 402 aa10.33□□□□□ -0.76
CLIP1-219ENST00000620786 TMEM99Q8N816 258 aa10.33□□□□□ -0.76
CLIP1-219ENST00000620786 OR2AE1Q8NHA4 323 aa10.33□□□□□ -0.76
CLIP1-219ENST00000620786 RDH5Q92781 318 aa10.33□□□□□ -0.76
CLIP1-219ENST00000620786 SEC22AQ96IW7 307 aa10.33□□□□□ -0.76
CLIP1-219ENST00000620786 SLC35E1Q96K37 410 aa10.33□□□□□ -0.76
CLIP1-219ENST00000620786 GPR78Q96P69 363 aa10.33□□□□□ -0.76
CLIP1-219ENST00000620786 MYH14Q7Z406 1995 aaKnown RBP10.33□□□□□ -0.76
CLIP1-219ENST00000620786 A0A0A6YYD5 115 aa10.32□□□□□ -0.76
CLIP1-219ENST00000620786 IGHV5-51A0A0C4DH38 117 aa10.32□□□□□ -0.76
CLIP1-219ENST00000620786 CXorf51AA0A1B0GTR3 108 aa10.32□□□□□ -0.76
CLIP1-219ENST00000620786 MEIOCA2RUB1 952 aa10.32□□□□□ -0.76
CLIP1-219ENST00000620786 SHISA8B8ZZ34 492 aa10.32□□□□□ -0.76
CLIP1-219ENST00000620786 SCAF4O95104 1147 aaKnown RBP10.32□□□□□ -0.76
CLIP1-219ENST00000620786 SRP14P37108 136 aaKnown RBP10.32□□□□□ -0.76
CLIP1-219ENST00000620786 CLINT1Q14677 625 aa10.32□□□□□ -0.76
CLIP1-219ENST00000620786 ELFN2Q5R3F8 820 aa10.32□□□□□ -0.76
CLIP1-219ENST00000620786 ANKRD34AQ69YU3 496 aa10.32□□□□□ -0.76
CLIP1-219ENST00000620786 DLEU7Q6UYE1 221 aa10.32□□□□□ -0.76
CLIP1-219ENST00000620786 FJX1Q86VR8 437 aa10.32□□□□□ -0.76
CLIP1-219ENST00000620786 TMEM200AQ86VY9 491 aa10.32□□□□□ -0.76
CLIP1-219ENST00000620786 GABRG1Q8N1C3 465 aa10.32□□□□□ -0.76
CLIP1-219ENST00000620786 NOXO1Q8NFA2 376 aa10.32□□□□□ -0.76
CLIP1-219ENST00000620786 OR2A14Q96R47 310 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms