RNA–Protein interactions for RNA: ENST00000620219.4

CPSF1-213, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF1, Length 4,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-213ENST00000620219 NANOS3P60323 173 aaKnown RBP14□□□□□ -0.17
CPSF1-213ENST00000620219 RAC3P60763 192 aa14□□□□□ -0.17
CPSF1-213ENST00000620219 PRSS45Q7RTY3 260 aa14□□□□□ -0.17
CPSF1-213ENST00000620219 PNLDC1Q8NA58 520 aaKnown RBP14□□□□□ -0.17
CPSF1-213ENST00000620219 ACOT12Q8WYK0 555 aa14□□□□□ -0.17
CPSF1-213ENST00000620219 APH1AQ96BI3 265 aa14□□□□□ -0.17
CPSF1-213ENST00000620219 TRIB1Q96RU8 372 aa14□□□□□ -0.17
CPSF1-213ENST00000620219 PARPBPQ9NWS1 579 aa14□□□□□ -0.17
CPSF1-213ENST00000620219 FGF9P31371 208 aaPredicted RBP14□□□□□ -0.17
CPSF1-213ENST00000620219 CDONQ4KMG0 1287 aa14□□□□□ -0.17
CPSF1-213ENST00000620219 TMEM251Q8N6I4 163 aa14□□□□□ -0.17
CPSF1-213ENST00000620219 OR5H6Q8NGV6 325 aa14□□□□□ -0.17
CPSF1-213ENST00000620219 COL25A1Q9BXS0 654 aaPredicted RBP14□□□□□ -0.17
CPSF1-213ENST00000620219 ABCG5Q9H222 651 aa14□□□□□ -0.17
CPSF1-213ENST00000620219 A3GALT2U3KPV4 340 aa14□□□□□ -0.17
CPSF1-213ENST00000620219 TRAV18A0A075B6X5 111 aa14□□□□□ -0.17
CPSF1-213ENST00000620219 PLPP2O43688 288 aa14□□□□□ -0.17
CPSF1-213ENST00000620219 MFAP5Q13361 173 aa14□□□□□ -0.17
CPSF1-213ENST00000620219 GDPD3Q7L5L3 318 aa14□□□□□ -0.17
CPSF1-213ENST00000620219 GJC3Q8NFK1 279 aa14□□□□□ -0.17
CPSF1-213ENST00000620219 SYNPRQ8TBG9 265 aa14□□□□□ -0.17
CPSF1-213ENST00000620219 ATF6BQ99941 703 aa14□□□□□ -0.17
CPSF1-213ENST00000620219 MIXL1Q9H2W2 232 aa14□□□□□ -0.17
CPSF1-213ENST00000620219 DEPPQ9NTK1 212 aa14□□□□□ -0.17
CPSF1-213ENST00000620219 ING4Q9UNL4 249 aa14□□□□□ -0.17
CPSF1-213ENST00000620219 ZNF891A8MT65 544 aaPredicted RBP13.99□□□□□ -0.17
CPSF1-213ENST00000620219 ZNF878C9JN71 531 aa13.99□□□□□ -0.17
CPSF1-213ENST00000620219 ART1P52961 327 aa13.99□□□□□ -0.17
CPSF1-213ENST00000620219 UBE2NP61088 152 aaKnown RBP13.99□□□□□ -0.17
CPSF1-213ENST00000620219 XKRXQ6PP77 449 aa13.99□□□□□ -0.17
CPSF1-213ENST00000620219 TIGD4Q8IY51 512 aa13.99□□□□□ -0.17
CPSF1-213ENST00000620219 CADM3Q8N126 398 aa13.99□□□□□ -0.17
CPSF1-213ENST00000620219 OR51A4Q8NGJ6 313 aa13.99□□□□□ -0.17
CPSF1-213ENST00000620219 ZNF416Q9BWM5 594 aa13.99□□□□□ -0.17
CPSF1-213ENST00000620219 ZMAT3Q9HA38 289 aaKnown RBP13.99□□□□□ -0.17
CPSF1-213ENST00000620219 LIN7BQ9HAP6 207 aa13.99□□□□□ -0.17
CPSF1-213ENST00000620219 EML5Q05BV3 1969 aa13.99□□□□□ -0.17
CPSF1-213ENST00000620219 ISPDA4D126 451 aa13.99□□□□□ -0.17
CPSF1-213ENST00000620219 AQP7P3A6NL99 342 aa13.99□□□□□ -0.17
CPSF1-213ENST00000620219 CX3CR1P49238 355 aa13.99□□□□□ -0.17
CPSF1-213ENST00000620219 EGR3Q06889 387 aa13.99□□□□□ -0.17
CPSF1-213ENST00000620219 FDCSPQ8NFU4 85 aa13.99□□□□□ -0.17
CPSF1-213ENST00000620219 FGF11Q92914 225 aa13.99□□□□□ -0.17
CPSF1-213ENST00000620219 CPNE4Q96A23 557 aaPredicted RBP13.99□□□□□ -0.17
CPSF1-213ENST00000620219 TAS2R4Q9NYW5 299 aa13.99□□□□□ -0.17
CPSF1-213ENST00000620219 GFRA3O60609 400 aa13.99□□□□□ -0.17
CPSF1-213ENST00000620219 EIF4EP06730 217 aaKnown RBP13.99□□□□□ -0.17
CPSF1-213ENST00000620219 PTHLHP12272 177 aa13.99□□□□□ -0.17
CPSF1-213ENST00000620219 BDH1Q02338 343 aa13.99□□□□□ -0.17
CPSF1-213ENST00000620219 GPR50Q13585 617 aa13.99□□□□□ -0.17
CPSF1-213ENST00000620219 FHL1Q13642 323 aa13.99□□□□□ -0.17
CPSF1-213ENST00000620219 ARFRP1Q13795 201 aa13.99□□□□□ -0.17
CPSF1-213ENST00000620219 CCDC58Q4VC31 144 aa13.99□□□□□ -0.17
CPSF1-213ENST00000620219 LINC01590Q5TEZ4 76 aa13.99□□□□□ -0.17
CPSF1-213ENST00000620219 TPRA1Q86W33 373 aa13.99□□□□□ -0.17
CPSF1-213ENST00000620219 GPX7Q96SL4 187 aaPredicted RBP13.99□□□□□ -0.17
CPSF1-213ENST00000620219 CCDC32Q9BV29 185 aa13.99□□□□□ -0.17
CPSF1-213ENST00000620219 POU2F3Q9UKI9 436 aa13.99□□□□□ -0.17
CPSF1-213ENST00000620219 TRAPPC4Q9Y296 219 aa13.99□□□□□ -0.17
CPSF1-213ENST00000620219 ZNF814B7Z6K7 855 aa13.98□□□□□ -0.17
CPSF1-213ENST00000620219 SGCEO43556 437 aa13.98□□□□□ -0.17
CPSF1-213ENST00000620219 ZIC3O60481 467 aa13.98□□□□□ -0.17
CPSF1-213ENST00000620219 FZD7O75084 574 aa13.98□□□□□ -0.17
CPSF1-213ENST00000620219 PITPNAQ00169 270 aa13.98□□□□□ -0.17
CPSF1-213ENST00000620219 RNLSQ5VYX0 342 aa13.98□□□□□ -0.17
CPSF1-213ENST00000620219 AWAT2Q6E213 333 aa13.98□□□□□ -0.17
CPSF1-213ENST00000620219 METAP1DQ6UB28 335 aaPredicted RBP13.98□□□□□ -0.17
CPSF1-213ENST00000620219 TRILQ7L0X0 811 aa13.98□□□□□ -0.17
CPSF1-213ENST00000620219 PRSS33Q8NF86 280 aa13.98□□□□□ -0.17
CPSF1-213ENST00000620219 HIST1H2AAQ96QV6 131 aa13.98□□□□□ -0.17
CPSF1-213ENST00000620219 ZNF587BE7ETH6 402 aa13.98□□□□□ -0.17
CPSF1-213ENST00000620219 C11orf54Q9H0W9 315 aaPredicted RBP13.98□□□□□ -0.17
CPSF1-213ENST00000620219 IGKV1D-43A0A0B4J1Z2 117 aa13.98□□□□□ -0.17
CPSF1-213ENST00000620219 CSTBP04080 98 aaKnown RBP13.98□□□□□ -0.17
CPSF1-213ENST00000620219 GLYATL3Q5SZD4 288 aa13.98□□□□□ -0.17
CPSF1-213ENST00000620219 FRRS1LQ9P0K9 344 aa13.98□□□□□ -0.17
CPSF1-213ENST00000620219 TRAV17A0A0B4J275 112 aa13.98□□□□□ -0.17
CPSF1-213ENST00000620219 FAM230AA0A1W2PPH8 454 aa13.98□□□□□ -0.17
CPSF1-213ENST00000620219 ATF1P18846 271 aa13.98□□□□□ -0.17
CPSF1-213ENST00000620219 PITPNBP48739 271 aa13.98□□□□□ -0.17
CPSF1-213ENST00000620219 SRP9P49458 86 aaKnown RBP13.98□□□□□ -0.17
CPSF1-213ENST00000620219 CD83Q01151 205 aa13.98□□□□□ -0.17
CPSF1-213ENST00000620219 TCF15Q12870 199 aa13.98□□□□□ -0.17
CPSF1-213ENST00000620219 DMKNQ6E0U4 476 aaPredicted RBP13.98□□□□□ -0.17
CPSF1-213ENST00000620219 A0A1W2PR80 420 aa13.97□□□□□ -0.17
CPSF1-213ENST00000620219 PRR32B1ATL7 298 aa13.97□□□□□ -0.17
CPSF1-213ENST00000620219 NPR2P20594 1047 aa13.97□□□□□ -0.17
CPSF1-213ENST00000620219 MAP2K3P46734 347 aa13.97□□□□□ -0.17
CPSF1-213ENST00000620219 SLC22A6Q4U2R8 563 aa13.97□□□□□ -0.17
CPSF1-213ENST00000620219 OR10K2Q6IF99 312 aa13.97□□□□□ -0.17
CPSF1-213ENST00000620219 CDC20BQ86Y33 519 aa13.97□□□□□ -0.17
CPSF1-213ENST00000620219 BATF2Q8N1L9 274 aa13.97□□□□□ -0.17
CPSF1-213ENST00000620219 GPR84Q9NQS5 396 aa13.97□□□□□ -0.17
CPSF1-213ENST00000620219 PINLYPA6NC86 204 aa13.97□□□□□ -0.17
CPSF1-213ENST00000620219 RRP8O43159 456 aaKnown RBP13.97□□□□□ -0.17
CPSF1-213ENST00000620219 MPIG6BO95866 241 aa13.97□□□□□ -0.17
CPSF1-213ENST00000620219 CEACAM1P13688 526 aa13.97□□□□□ -0.17
CPSF1-213ENST00000620219 IL32P24001 234 aa13.97□□□□□ -0.17
CPSF1-213ENST00000620219 ZNF121P58317 390 aaPredicted RBP13.97□□□□□ -0.17
CPSF1-213ENST00000620219 LYPD8Q6UX82 237 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms