RNA–Protein interactions for RNA: ENST00000618061.4

CBWD1-226, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 2,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-226ENST00000618061 FOLR3P41439 243 aa12.36□□□□□ -0.43
CBWD1-226ENST00000618061 SSR4P51571 173 aa12.36□□□□□ -0.43
CBWD1-226ENST00000618061 PRKXP51817 358 aa12.36□□□□□ -0.43
CBWD1-226ENST00000618061 CLDN17P56750 224 aa12.36□□□□□ -0.43
CBWD1-226ENST00000618061 TRA2AQ13595 282 aaKnown RBP eCLIP12.36□□□□□ -0.43
CBWD1-226ENST00000618061 BCL2A1Q16548 175 aa12.36□□□□□ -0.43
CBWD1-226ENST00000618061 LINC00303Q3SY05 128 aa12.36□□□□□ -0.43
CBWD1-226ENST00000618061 RPS19BP1Q86WX3 136 aaKnown RBP12.36□□□□□ -0.43
CBWD1-226ENST00000618061 ZNF775Q96BV0 537 aaPredicted RBP12.36□□□□□ -0.43
CBWD1-226ENST00000618061 FGGYQ96C11 551 aa12.36□□□□□ -0.43
CBWD1-226ENST00000618061 MRI1Q9BV20 369 aa12.36□□□□□ -0.43
CBWD1-226ENST00000618061 FAM206AQ9NX38 181 aa12.36□□□□□ -0.43
CBWD1-226ENST00000618061 ASH2LQ9UBL3 628 aa12.36□□□□□ -0.43
CBWD1-226ENST00000618061 CKLFQ9UBR5 152 aa12.36□□□□□ -0.43
CBWD1-226ENST00000618061 GDF2Q9UK05 429 aaPredicted RBP12.36□□□□□ -0.43
CBWD1-226ENST00000618061 NCKAP5O14513 1909 aa12.36□□□□□ -0.43
CBWD1-226ENST00000618061 CIB4A0PJX0 185 aa12.36□□□□□ -0.43
CBWD1-226ENST00000618061 RER1O15258 196 aa12.36□□□□□ -0.43
CBWD1-226ENST00000618061 TTRP02766 147 aa12.36□□□□□ -0.43
CBWD1-226ENST00000618061 ACSM4P0C7M7 580 aa12.36□□□□□ -0.43
CBWD1-226ENST00000618061 HTR2CP28335 458 aa12.36□□□□□ -0.43
CBWD1-226ENST00000618061 Q0VFX4 171 aa12.36□□□□□ -0.43
CBWD1-226ENST00000618061 EXT1Q16394 746 aa12.36□□□□□ -0.43
CBWD1-226ENST00000618061 PCGF3Q3KNV8 242 aa12.36□□□□□ -0.43
CBWD1-226ENST00000618061 DMRTC1Q5HYR2 192 aa12.36□□□□□ -0.43
CBWD1-226ENST00000618061 THEM4Q5T1C6 240 aa12.36□□□□□ -0.43
CBWD1-226ENST00000618061 TIGD3Q6B0B8 471 aa12.36□□□□□ -0.43
CBWD1-226ENST00000618061 ANKRD16Q6P6B7 361 aa12.36□□□□□ -0.43
CBWD1-226ENST00000618061 OPN5Q6U736 354 aa12.36□□□□□ -0.43
CBWD1-226ENST00000618061 TIPARPQ7Z3E1 657 aaKnown RBP12.36□□□□□ -0.43
CBWD1-226ENST00000618061 RNF144BQ7Z419 303 aa12.36□□□□□ -0.43
CBWD1-226ENST00000618061 DVL3Q92997 716 aaPredicted RBP12.36□□□□□ -0.43
CBWD1-226ENST00000618061 FANCFQ9NPI8 374 aa12.36□□□□□ -0.43
CBWD1-226ENST00000618061 COL27A1Q8IZC6 1860 aaPredicted RBP12.35□□□□□ -0.43
CBWD1-226ENST00000618061 PCSK5Q92824 1860 aa12.35□□□□□ -0.43
CBWD1-226ENST00000618061 LOC100289279A0A1B0GTE1 492 aa12.35□□□□□ -0.43
CBWD1-226ENST00000618061 ACOT7O00154 380 aa12.35□□□□□ -0.43
CBWD1-226ENST00000618061 SULT1B1O43704 296 aa12.35□□□□□ -0.43
CBWD1-226ENST00000618061 ECDO95905 644 aaPredicted RBP12.35□□□□□ -0.43
CBWD1-226ENST00000618061 TCN2P20062 427 aa12.35□□□□□ -0.43
CBWD1-226ENST00000618061 ANXA7P20073 488 aaKnown RBP12.35□□□□□ -0.43
CBWD1-226ENST00000618061 PHYHD1Q5SRE7 291 aa12.35□□□□□ -0.43
CBWD1-226ENST00000618061 LAMTOR1Q6IAA8 161 aa12.35□□□□□ -0.43
CBWD1-226ENST00000618061 FAM166AQ6J272 317 aa12.35□□□□□ -0.43
CBWD1-226ENST00000618061 Q6ZTK2 550 aa12.35□□□□□ -0.43
CBWD1-226ENST00000618061 LUZP2Q86TE4 346 aa12.35□□□□□ -0.43
CBWD1-226ENST00000618061 OR8S1Q8NH09 359 aa12.35□□□□□ -0.43
CBWD1-226ENST00000618061 M1APQ8TC57 530 aa12.35□□□□□ -0.43
CBWD1-226ENST00000618061 NKD1Q969G9 470 aa12.35□□□□□ -0.43
CBWD1-226ENST00000618061 ADAT3Q96EY9 351 aaPredicted RBP12.35□□□□□ -0.43
CBWD1-226ENST00000618061 OXGR1Q96P68 337 aa12.35□□□□□ -0.43
CBWD1-226ENST00000618061 C7orf50Q9BRJ6 194 aaKnown RBP12.35□□□□□ -0.43
CBWD1-226ENST00000618061 SEC22CQ9BRL7 303 aa12.35□□□□□ -0.43
CBWD1-226ENST00000618061 PBOV1Q9GZY1 135 aa12.35□□□□□ -0.43
CBWD1-226ENST00000618061 C1orf198Q9H425 327 aa12.35□□□□□ -0.43
CBWD1-226ENST00000618061 HPF1Q9NWY4 346 aa12.35□□□□□ -0.43
CBWD1-226ENST00000618061 OR2M5A3KFT3 312 aa12.35□□□□□ -0.43
CBWD1-226ENST00000618061 AQP7P3A6NL99 342 aa12.35□□□□□ -0.43
CBWD1-226ENST00000618061 SSNA1O43805 119 aa12.35□□□□□ -0.43
CBWD1-226ENST00000618061 ZIC3O60481 467 aa12.35□□□□□ -0.43
CBWD1-226ENST00000618061 HRGP04196 525 aa12.35□□□□□ -0.43
CBWD1-226ENST00000618061 LIFP15018 202 aa12.35□□□□□ -0.43
CBWD1-226ENST00000618061 PSMB1P20618 241 aaKnown RBP12.35□□□□□ -0.43
CBWD1-226ENST00000618061 GNALP38405 381 aa12.35□□□□□ -0.43
CBWD1-226ENST00000618061 MPLP40238 635 aa12.35□□□□□ -0.43
CBWD1-226ENST00000618061 RAD52P43351 418 aa12.35□□□□□ -0.43
CBWD1-226ENST00000618061 RSPO4Q2I0M5 234 aaPredicted RBP12.35□□□□□ -0.43
CBWD1-226ENST00000618061 GFOD2Q3B7J2 385 aa12.35□□□□□ -0.43
CBWD1-226ENST00000618061 MOGAT2Q3SYC2 334 aa12.35□□□□□ -0.43
CBWD1-226ENST00000618061 SLC25A25Q6KCM7 469 aa12.35□□□□□ -0.43
CBWD1-226ENST00000618061 TMPPEQ6ZT21 453 aa12.35□□□□□ -0.43
CBWD1-226ENST00000618061 ZNF627Q7L945 461 aa12.35□□□□□ -0.43
CBWD1-226ENST00000618061 OR4D6Q8NGJ1 314 aa12.35□□□□□ -0.43
CBWD1-226ENST00000618061 OR56B4Q8NH76 319 aa12.35□□□□□ -0.43
CBWD1-226ENST00000618061 ZFAND1Q8TCF1 268 aa12.35□□□□□ -0.43
CBWD1-226ENST00000618061 ANGPTL4Q9BY76 406 aa12.35□□□□□ -0.43
CBWD1-226ENST00000618061 AKAP7Q9P0M2 348 aaPredicted RBP12.35□□□□□ -0.43
CBWD1-226ENST00000618061 COPZ2Q9P299 210 aa12.35□□□□□ -0.43
CBWD1-226ENST00000618061 DKKL1Q9UK85 242 aa12.35□□□□□ -0.43
CBWD1-226ENST00000618061 LOXL2Q9Y4K0 774 aa12.35□□□□□ -0.43
CBWD1-226ENST00000618061 HSPB11Q9Y547 144 aa12.35□□□□□ -0.43
CBWD1-226ENST00000618061 PCDHGA5Q9Y5G8 931 aa12.35□□□□□ -0.43
CBWD1-226ENST00000618061 GPR179Q6PRD1 2367 aa12.34□□□□□ -0.43
CBWD1-226ENST00000618061 ZNF726A6NNF4 738 aa12.34□□□□□ -0.43
CBWD1-226ENST00000618061 ISG15P05161 165 aa12.34□□□□□ -0.43
CBWD1-226ENST00000618061 ACHEP22303 614 aa12.34□□□□□ -0.43
CBWD1-226ENST00000618061 ERP29P30040 261 aaKnown RBP12.34□□□□□ -0.43
CBWD1-226ENST00000618061 EIF1P41567 113 aaKnown RBP12.34□□□□□ -0.43
CBWD1-226ENST00000618061 GPR85P60893 370 aa12.34□□□□□ -0.43
CBWD1-226ENST00000618061 GLT8D1Q68CQ7 371 aa12.34□□□□□ -0.43
CBWD1-226ENST00000618061 KLHL24Q6TFL4 600 aa12.34□□□□□ -0.43
CBWD1-226ENST00000618061 DTWD2Q8NBA8 298 aa12.34□□□□□ -0.43
CBWD1-226ENST00000618061 GRPEL2Q8TAA5 225 aa12.34□□□□□ -0.43
CBWD1-226ENST00000618061 OR51E1Q8TCB6 317 aa12.34□□□□□ -0.43
CBWD1-226ENST00000618061 ZBTB8AQ96BR9 441 aa12.34□□□□□ -0.43
CBWD1-226ENST00000618061 ZNF385AQ96PM9 386 aaKnown RBP12.34□□□□□ -0.43
CBWD1-226ENST00000618061 SPACA5Q96QH8 159 aa12.34□□□□□ -0.43
CBWD1-226ENST00000618061 NOX3Q9HBY0 568 aa12.34□□□□□ -0.43
CBWD1-226ENST00000618061 ZNF319Q9P2F9 582 aa12.34□□□□□ -0.43
CBWD1-226ENST00000618061 PISDQ9UG56 409 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms