RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 SERINC5Q86VE9 423 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 LHFPL5Q8TAF8 219 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 GPR78Q96P69 363 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 HEYLQ9NQ87 328 aaPredicted RBP8.54□□□□□ -1.04
COL12A1-211ENST00000615798 MED17Q9NVC6 651 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 B4DEV8 164 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 PJVKQ0ZLH3 352 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 SIX3O95343 332 aaPredicted RBP8.54□□□□□ -1.04
COL12A1-211ENST00000615798 F11P03951 625 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 ACRV1P26436 265 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 HLA-DRB5Q30154 266 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 OR8G2PQ6IF36 304 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 CGB2Q6NT52 195 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 LAX1Q8IWV1 398 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 OR10G3Q8NGC4 313 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 SECTM1Q8WVN6 248 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 DNAJA3Q96EY1 480 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 FYTTD1Q96QD9 318 aaKnown RBP8.54□□□□□ -1.04
COL12A1-211ENST00000615798 PEF1Q9UBV8 284 aaKnown RBP8.54□□□□□ -1.04
COL12A1-211ENST00000615798 TRAPPC2LQ9UL33 140 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 SCN4AP35499 1836 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 CA12O43570 354 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 ZNF354AO60765 605 aaPredicted RBP8.54□□□□□ -1.04
COL12A1-211ENST00000615798 IL2RGP31785 369 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 CTSOP43234 321 aaPredicted RBP8.54□□□□□ -1.04
COL12A1-211ENST00000615798 ERVS71-1P61550 626 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 GPR32P1Q8NGA4 272 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 TMEM125Q96AQ2 219 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 FLRT3Q9NZU0 649 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 ABCA4P78363 2273 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 DEFA4P12838 97 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 KIRREL1Q96J84 757 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 TCRBV5S1A1TA0A578 114 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 UPK3BL1B0FP48 263 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 UPK3BL2E5RIL1 263 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 KCNAB3O43448 404 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 KLF7O75840 302 aaPredicted RBP8.54□□□□□ -1.04
COL12A1-211ENST00000615798 DRD2P14416 443 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 TYRP1P17643 537 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 OR52N1Q8NH53 320 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 IL1F10Q8WWZ1 152 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 ZNF385DQ9H6B1 395 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 OLAHQ9NV23 265 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 SNRPGP15A8MWD9 76 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 ERI3O43414 337 aaKnown RBP8.54□□□□□ -1.04
COL12A1-211ENST00000615798 IL3RAP26951 378 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 CSNK1DP48730 415 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 LTC4SQ16873 150 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 NKAIN1Q4KMZ8 207 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 NLGN4XQ8N0W4 816 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 NLGN4YQ8NFZ3 816 aaPredicted RBP8.54□□□□□ -1.04
COL12A1-211ENST00000615798 SCAMP5Q8TAC9 235 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 CRISPLD2Q9H0B8 497 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 IKZF5Q9H5V7 419 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 NECAP2Q9NVZ3 263 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 RIMS3Q9UJD0 308 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 B3GALT5Q9Y2C3 310 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 POLDIP2Q9Y2S7 368 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 CYB5R3P00387 301 aaPredicted RBP8.54□□□□□ -1.04
COL12A1-211ENST00000615798 EMP2P54851 167 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 ZNF85Q03923 595 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 FAM117BQ6P1L5 589 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 SH3RF2Q8TEC5 729 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 DNMT3BQ9UBC3 853 aaKnown RBP8.54□□□□□ -1.04
COL12A1-211ENST00000615798 CYC1P08574 325 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 GNSP15586 552 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 IL1RNP18510 177 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 EMX1Q04741 257 aaPredicted RBP8.54□□□□□ -1.04
COL12A1-211ENST00000615798 CD226Q15762 336 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 ZNF626Q68DY1 528 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 FAM109BQ6ICB4 259 aaPredicted RBP8.54□□□□□ -1.04
COL12A1-211ENST00000615798 OSTM1Q86WC4 334 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 PRSS35Q8N3Z0 413 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 OR4B1Q8NGF8 309 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 OR5M3Q8NGP4 307 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 PSG11Q9UQ72 335 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 ECM29Q5VYK3 1845 aa8.54□□□□□ -1.04
COL12A1-211ENST00000615798 I6L893 689 aaPredicted RBP8.53□□□□□ -1.04
COL12A1-211ENST00000615798 RRP8O43159 456 aaKnown RBP8.53□□□□□ -1.04
COL12A1-211ENST00000615798 ST8SIA3O43173 380 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 OC90Q02509 493 aaPredicted RBP8.53□□□□□ -1.04
COL12A1-211ENST00000615798 TMEM241Q24JQ0 296 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 ZFAND6Q6FIF0 208 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 B3GNT8Q7Z7M8 397 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 ISCA2Q86U28 154 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 MBNL1Q9NR56 388 aaKnown RBP8.53□□□□□ -1.04
COL12A1-211ENST00000615798 PMP2P02689 132 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 MT-ND6P03923 174 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 SFTPCP11686 197 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 COX5AP20674 150 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 BCL3P20749 454 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 DAP3P51398 398 aaKnown RBP8.53□□□□□ -1.04
COL12A1-211ENST00000615798 ZNF133P52736 654 aaPredicted RBP8.53□□□□□ -1.04
COL12A1-211ENST00000615798 EOGTQ5NDL2 527 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 FCRLAQ7L513 359 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 YRDCQ86U90 279 aaKnown RBP8.53□□□□□ -1.04
COL12A1-211ENST00000615798 NIT1Q86X76 327 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 OR5P2Q8WZ92 322 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 PLSCR4Q9NRQ2 329 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 TRAPPC2LH3BP13 241 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms