RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 ZNF318Q5VUA4 2279 aa13.15□□□□□ -0.3
CDH1-213ENST00000612417 C9J4A7 227 aa13.15□□□□□ -0.3
CDH1-213ENST00000612417 AHSA1O95433 338 aa13.15□□□□□ -0.3
CDH1-213ENST00000612417 AKAIN1P0CW23 69 aa13.15□□□□□ -0.3
CDH1-213ENST00000612417 VSIG10L2P0DP72 767 aa13.15□□□□□ -0.3
CDH1-213ENST00000612417 IGFBP3P17936 291 aaPredicted RBP13.15□□□□□ -0.3
CDH1-213ENST00000612417 CRABP1P29762 137 aa13.15□□□□□ -0.3
CDH1-213ENST00000612417 RIDAP52758 137 aaKnown RBP13.15□□□□□ -0.3
CDH1-213ENST00000612417 DLX5P56178 289 aa13.15□□□□□ -0.3
CDH1-213ENST00000612417 ADAM8P78325 824 aa13.15□□□□□ -0.3
CDH1-213ENST00000612417 GLO1Q04760 184 aa13.15□□□□□ -0.3
CDH1-213ENST00000612417 TMEM225Q6GV28 225 aa13.15□□□□□ -0.3
CDH1-213ENST00000612417 MRPL14Q6P1L8 145 aaKnown RBP13.15□□□□□ -0.3
CDH1-213ENST00000612417 FAM198BQ6UWH4 519 aa13.15□□□□□ -0.3
CDH1-213ENST00000612417 KRT77Q7Z794 578 aa13.15□□□□□ -0.3
CDH1-213ENST00000612417 ASB5Q8WWX0 329 aa13.15□□□□□ -0.3
CDH1-213ENST00000612417 SLC25A28Q96A46 364 aa13.15□□□□□ -0.3
CDH1-213ENST00000612417 GINS4Q9BRT9 223 aa13.15□□□□□ -0.3
CDH1-213ENST00000612417 ABHD6Q9BV23 337 aa13.15□□□□□ -0.3
CDH1-213ENST00000612417 CHIAQ9BZP6 476 aa13.15□□□□□ -0.3
CDH1-213ENST00000612417 DHDHQ9UQ10 334 aa13.15□□□□□ -0.3
CDH1-213ENST00000612417 LOXL2Q9Y4K0 774 aa13.15□□□□□ -0.3
CDH1-213ENST00000612417 KNTC1P50748 2209 aa13.14□□□□□ -0.31
CDH1-213ENST00000612417 OR6C65A6NJZ3 312 aa13.14□□□□□ -0.31
CDH1-213ENST00000612417 FTCDNL1E5RQL4 147 aa13.14□□□□□ -0.31
CDH1-213ENST00000612417 SULT1C2O00338 296 aa13.14□□□□□ -0.31
CDH1-213ENST00000612417 SRSF10O75494 262 aaKnown RBP13.14□□□□□ -0.31
CDH1-213ENST00000612417 CFDP00746 253 aaPredicted RBP13.14□□□□□ -0.31
CDH1-213ENST00000612417 CD2P06729 351 aa13.14□□□□□ -0.31
CDH1-213ENST00000612417 MELTFP08582 738 aa13.14□□□□□ -0.31
CDH1-213ENST00000612417 PRSS3P35030 304 aa13.14□□□□□ -0.31
CDH1-213ENST00000612417 CLDN6P56747 220 aa13.14□□□□□ -0.31
CDH1-213ENST00000612417 SLC26A5P58743 744 aa13.14□□□□□ -0.31
CDH1-213ENST00000612417 MFGE8Q08431 387 aaPredicted RBP13.14□□□□□ -0.31
CDH1-213ENST00000612417 OPCMLQ14982 345 aa13.14□□□□□ -0.31
CDH1-213ENST00000612417 DCAF12Q5T6F0 453 aa13.14□□□□□ -0.31
CDH1-213ENST00000612417 FAM122CQ6P4D5 195 aa13.14□□□□□ -0.31
CDH1-213ENST00000612417 NDUFAF7Q7L592 441 aa13.14□□□□□ -0.31
CDH1-213ENST00000612417 MISPQ8IVT2 679 aa13.14□□□□□ -0.31
CDH1-213ENST00000612417 CLEC1AQ8NC01 280 aa13.14□□□□□ -0.31
CDH1-213ENST00000612417 NFAM1Q8NET5 270 aaPredicted RBP13.14□□□□□ -0.31
CDH1-213ENST00000612417 OR1J4Q8NGS1 313 aa13.14□□□□□ -0.31
CDH1-213ENST00000612417 OR52N5Q8NH56 324 aa13.14□□□□□ -0.31
CDH1-213ENST00000612417 GPX8Q8TED1 209 aa13.14□□□□□ -0.31
CDH1-213ENST00000612417 DNAJA3Q96EY1 480 aa13.14□□□□□ -0.31
CDH1-213ENST00000612417 ZNF587Q96SQ5 575 aaPredicted RBP13.14□□□□□ -0.31
CDH1-213ENST00000612417 CKLFQ9UBR5 152 aa13.14□□□□□ -0.31
CDH1-213ENST00000612417 LRP12Q9Y561 859 aa13.14□□□□□ -0.31
CDH1-213ENST00000612417 B3GALT1Q9Y5Z6 326 aa13.14□□□□□ -0.31
CDH1-213ENST00000612417 TRAV18A0A075B6X5 111 aa13.14□□□□□ -0.31
CDH1-213ENST00000612417 TRBV11-1A0A0K0K1C0 115 aa13.14□□□□□ -0.31
CDH1-213ENST00000612417 TMEM272A0A1B0GTI8 110 aa13.14□□□□□ -0.31
CDH1-213ENST00000612417 UBE2QL1A1L167 161 aa13.14□□□□□ -0.31
CDH1-213ENST00000612417 NPIPB13A6NJU9 1138 aa13.14□□□□□ -0.31
CDH1-213ENST00000612417 B4E171 279 aa13.14□□□□□ -0.31
CDH1-213ENST00000612417 NPIPB4C9JG80 1138 aa13.14□□□□□ -0.31
CDH1-213ENST00000612417 H3BSH0 61 aa13.14□□□□□ -0.31
CDH1-213ENST00000612417 KDM4BO94953 1096 aa13.14□□□□□ -0.31
CDH1-213ENST00000612417 TSPAN7P41732 249 aa13.14□□□□□ -0.31
CDH1-213ENST00000612417 ACTBP60709 375 aa13.14□□□□□ -0.31
CDH1-213ENST00000612417 ACTG1P63261 375 aa13.14□□□□□ -0.31
CDH1-213ENST00000612417 TAGLNQ01995 201 aaKnown RBP13.14□□□□□ -0.31
CDH1-213ENST00000612417 EIF2B1Q14232 305 aaKnown RBP13.14□□□□□ -0.31
CDH1-213ENST00000612417 POU4F3Q15319 338 aa13.14□□□□□ -0.31
CDH1-213ENST00000612417 ETFDHQ16134 617 aa13.14□□□□□ -0.31
CDH1-213ENST00000612417 GLT8D1Q68CQ7 371 aa13.14□□□□□ -0.31
CDH1-213ENST00000612417 C16orf47Q6ZP98 133 aaPredicted RBP13.14□□□□□ -0.31
CDH1-213ENST00000612417 APCDD1LQ8NCL9 501 aa13.14□□□□□ -0.31
CDH1-213ENST00000612417 PNPLA2Q96AD5 504 aa13.14□□□□□ -0.31
CDH1-213ENST00000612417 FOXN4Q96NZ1 517 aa13.14□□□□□ -0.31
CDH1-213ENST00000612417 GSX2Q9BZM3 304 aa13.14□□□□□ -0.31
CDH1-213ENST00000612417 SEMA4CQ9C0C4 833 aa13.14□□□□□ -0.31
CDH1-213ENST00000612417 WDR54Q9H977 334 aa13.14□□□□□ -0.31
CDH1-213ENST00000612417 NXT1Q9UKK6 140 aaKnown RBP13.14□□□□□ -0.31
CDH1-213ENST00000612417 PTRH2Q9Y3E5 179 aaKnown RBP13.14□□□□□ -0.31
CDH1-213ENST00000612417 RGS11O94810 467 aa13.13□□□□□ -0.31
CDH1-213ENST00000612417 WNT11O96014 354 aa13.13□□□□□ -0.31
CDH1-213ENST00000612417 ISG15P05161 165 aa13.13□□□□□ -0.31
CDH1-213ENST00000612417 RRASP10301 218 aa13.13□□□□□ -0.31
CDH1-213ENST00000612417 CXCL2P19875 107 aa13.13□□□□□ -0.31
CDH1-213ENST00000612417 NFYAP23511 347 aaPredicted RBP13.13□□□□□ -0.31
CDH1-213ENST00000612417 PTGS2P35354 604 aa13.13□□□□□ -0.31
CDH1-213ENST00000612417 ZP4Q12836 540 aa13.13□□□□□ -0.31
CDH1-213ENST00000612417 PCK2Q16822 640 aa13.13□□□□□ -0.31
CDH1-213ENST00000612417 OR7E24Q6IFN5 339 aa13.13□□□□□ -0.31
CDH1-213ENST00000612417 HDDC2Q7Z4H3 204 aa13.13□□□□□ -0.31
CDH1-213ENST00000612417 OR4D10Q8NGI6 311 aa13.13□□□□□ -0.31
CDH1-213ENST00000612417 ASB13Q8WXK3 278 aa13.13□□□□□ -0.31
CDH1-213ENST00000612417 TMEM234Q8WY98 164 aa13.13□□□□□ -0.31
CDH1-213ENST00000612417 ELMOD3Q96FG2 381 aa13.13□□□□□ -0.31
CDH1-213ENST00000612417 WDR77Q9BQA1 342 aaPredicted RBP13.13□□□□□ -0.31
CDH1-213ENST00000612417 OR11A1Q9GZK7 315 aa13.13□□□□□ -0.31
CDH1-213ENST00000612417 ALX4Q9H161 411 aaPredicted RBP13.13□□□□□ -0.31
CDH1-213ENST00000612417 OPN4Q9UHM6 478 aa13.13□□□□□ -0.31
CDH1-213ENST00000612417 R4GMQ9 66 aa13.13□□□□□ -0.31
CDH1-213ENST00000612417 PCNX2A6NKB5 2137 aa13.13□□□□□ -0.31
CDH1-213ENST00000612417 MEGF11A6BM72 1044 aa13.12□□□□□ -0.31
CDH1-213ENST00000612417 A6NIZ1 184 aa13.12□□□□□ -0.31
CDH1-213ENST00000612417 HMSDA8MTL9 139 aa13.12□□□□□ -0.31
CDH1-213ENST00000612417 MCRIP1C9JLW8 97 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms