RNA–Protein interactions for RNA: ENST00000612277.4

HLCS-207, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HLCS, Length 6,112 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-207ENST00000612277 CLEC4DQ8WXI8 215 aa11.38□□□□□ -0.59
HLCS-207ENST00000612277 CITED1Q99966 193 aa11.38□□□□□ -0.59
HLCS-207ENST00000612277 NUDT3O95989 172 aa11.38□□□□□ -0.59
HLCS-207ENST00000612277 LIMS3P0CW19 117 aa11.38□□□□□ -0.59
HLCS-207ENST00000612277 LIMS4P0CW20 117 aa11.38□□□□□ -0.59
HLCS-207ENST00000612277 TCTAP57738 103 aa11.38□□□□□ -0.59
HLCS-207ENST00000612277 SNRPGP62308 76 aaKnown RBP11.38□□□□□ -0.59
HLCS-207ENST00000612277 MIDNQ504T8 468 aa11.38□□□□□ -0.59
HLCS-207ENST00000612277 NEIL2Q969S2 332 aa11.38□□□□□ -0.59
HLCS-207ENST00000612277 PINX1Q96BK5 328 aaKnown RBP11.38□□□□□ -0.59
HLCS-207ENST00000612277 RSRP1Q9BUV0 290 aa11.38□□□□□ -0.59
HLCS-207ENST00000612277 TXLNGYQ9BZA5 131 aa11.38□□□□□ -0.59
HLCS-207ENST00000612277 ZNF264O43296 627 aa11.38□□□□□ -0.59
HLCS-207ENST00000612277 WDR1O75083 606 aa11.38□□□□□ -0.59
HLCS-207ENST00000612277 CPMP14384 443 aa11.38□□□□□ -0.59
HLCS-207ENST00000612277 UBE2MP61081 183 aaKnown RBP11.38□□□□□ -0.59
HLCS-207ENST00000612277 FAM3AP98173 230 aa11.38□□□□□ -0.59
HLCS-207ENST00000612277 TMEM241Q24JQ0 296 aa11.38□□□□□ -0.59
HLCS-207ENST00000612277 BPIFA4PQ86YQ2 179 aa11.38□□□□□ -0.59
HLCS-207ENST00000612277 SLC38A9Q8NBW4 561 aa11.38□□□□□ -0.59
HLCS-207ENST00000612277 PACRGQ96M98 296 aaPredicted RBP11.38□□□□□ -0.59
HLCS-207ENST00000612277 ZIC5Q96T25 663 aa11.38□□□□□ -0.59
HLCS-207ENST00000612277 SOWAHBA6NEL2 793 aa11.37□□□□□ -0.59
HLCS-207ENST00000612277 ABHD16AO95870 558 aa11.37□□□□□ -0.59
HLCS-207ENST00000612277 CRISP2P16562 243 aa11.37□□□□□ -0.59
HLCS-207ENST00000612277 ABCD3P28288 659 aa11.37□□□□□ -0.59
HLCS-207ENST00000612277 ARRB2P32121 409 aa11.37□□□□□ -0.59
HLCS-207ENST00000612277 ACAA2P42765 397 aaKnown RBP11.37□□□□□ -0.59
HLCS-207ENST00000612277 RABIFP47224 123 aa11.37□□□□□ -0.59
HLCS-207ENST00000612277 GALNT16Q8N428 558 aa11.37□□□□□ -0.59
HLCS-207ENST00000612277 FAM24BQ8N5W8 94 aa11.37□□□□□ -0.59
HLCS-207ENST00000612277 SELENOFO60613 162 aa11.37□□□□□ -0.59
HLCS-207ENST00000612277 GZMKP49863 264 aa11.37□□□□□ -0.59
HLCS-207ENST00000612277 CD81P60033 236 aa11.37□□□□□ -0.59
HLCS-207ENST00000612277 B3GNTL1Q67FW5 361 aaPredicted RBP11.37□□□□□ -0.59
HLCS-207ENST00000612277 FDX2Q6P4F2 183 aa11.37□□□□□ -0.59
HLCS-207ENST00000612277 PLXDC2Q6UX71 529 aa11.37□□□□□ -0.59
HLCS-207ENST00000612277 PLSCR3Q9NRY6 295 aa11.37□□□□□ -0.59
HLCS-207ENST00000612277 KIF20BQ96Q89 1820 aa11.37□□□□□ -0.59
HLCS-207ENST00000612277 A0A0A6YYC8 382 aaPredicted RBP11.37□□□□□ -0.59
HLCS-207ENST00000612277 ZCWPW2A0A1B0GU75 182 aa11.37□□□□□ -0.59
HLCS-207ENST00000612277 I3L1I5 382 aaPredicted RBP11.37□□□□□ -0.59
HLCS-207ENST00000612277 ELAVL4P26378 380 aaKnown RBP11.37□□□□□ -0.59
HLCS-207ENST00000612277 FKBP1BP68106 108 aa11.37□□□□□ -0.59
HLCS-207ENST00000612277 ZNF343Q6P1L6 599 aa11.37□□□□□ -0.59
HLCS-207ENST00000612277 ARHGEF39Q8N4T4 335 aa11.37□□□□□ -0.59
HLCS-207ENST00000612277 DUS3LQ96G46 650 aaKnown RBP11.37□□□□□ -0.59
HLCS-207ENST00000612277 CLEC2DQ9UHP7 191 aa11.37□□□□□ -0.59
HLCS-207ENST00000612277 EMP1P54849 157 aa11.37□□□□□ -0.59
HLCS-207ENST00000612277 PLP1P60201 277 aa11.37□□□□□ -0.59
HLCS-207ENST00000612277 DOK3Q7L591 496 aa11.37□□□□□ -0.59
HLCS-207ENST00000612277 FAM71CQ8NEG0 241 aa11.37□□□□□ -0.59
HLCS-207ENST00000612277 OR5D13Q8NGL4 314 aa11.37□□□□□ -0.59
HLCS-207ENST00000612277 BCL7CQ8WUZ0 217 aaPredicted RBP11.37□□□□□ -0.59
HLCS-207ENST00000612277 FAM131CQ96AQ9 280 aa11.37□□□□□ -0.59
HLCS-207ENST00000612277 TAS2R4Q9NYW5 299 aa11.37□□□□□ -0.59
HLCS-207ENST00000612277 BOKQ9UMX3 212 aaPredicted RBP11.37□□□□□ -0.59
HLCS-207ENST00000612277 RNF24Q9Y225 148 aa11.37□□□□□ -0.59
HLCS-207ENST00000612277 MMP24Q9Y5R2 645 aa11.37□□□□□ -0.59
HLCS-207ENST00000612277 COL3A1P02461 1466 aaPredicted RBP11.37□□□□□ -0.59
HLCS-207ENST00000612277 NDUFS8O00217 210 aa11.37□□□□□ -0.59
HLCS-207ENST00000612277 CD200P41217 278 aa11.37□□□□□ -0.59
HLCS-207ENST00000612277 ZNF789Q5FWF6 425 aa11.37□□□□□ -0.59
HLCS-207ENST00000612277 BOD1Q96IK1 185 aa11.37□□□□□ -0.59
HLCS-207ENST00000612277 MSL2Q9HCI7 577 aa11.37□□□□□ -0.59
HLCS-207ENST00000612277 PRSS16Q9NQE7 514 aa11.37□□□□□ -0.59
HLCS-207ENST00000612277 ASIC5Q9NY37 505 aa11.37□□□□□ -0.59
HLCS-207ENST00000612277 WRAP73Q9P2S5 460 aaPredicted RBP11.37□□□□□ -0.59
HLCS-207ENST00000612277 SLC17A4Q9Y2C5 497 aa11.37□□□□□ -0.59
HLCS-207ENST00000612277 UBE2L5PA0A1B0GUS4 154 aa11.36□□□□□ -0.59
HLCS-207ENST00000612277 ACRP10323 421 aa11.36□□□□□ -0.59
HLCS-207ENST00000612277 CPEP16870 476 aa11.36□□□□□ -0.59
HLCS-207ENST00000612277 SRSF9Q13242 221 aaKnown RBP eCLIP11.36□□□□□ -0.59
HLCS-207ENST00000612277 IHHQ14623 411 aa11.36□□□□□ -0.59
HLCS-207ENST00000612277 OR2T6Q8NHC8 308 aa11.36□□□□□ -0.59
HLCS-207ENST00000612277 LKAAEAR1Q8TD35 194 aa11.36□□□□□ -0.59
HLCS-207ENST00000612277 STARD5Q9NSY2 213 aa11.36□□□□□ -0.59
HLCS-207ENST00000612277 TRAPPC4Q9Y296 219 aa11.36□□□□□ -0.59
HLCS-207ENST00000612277 DIP2CQ9Y2E4 1556 aa11.36□□□□□ -0.59
HLCS-207ENST00000612277 OR2T8A6NH00 312 aa11.36□□□□□ -0.59
HLCS-207ENST00000612277 SIGLEC6O43699 453 aa11.36□□□□□ -0.59
HLCS-207ENST00000612277 PIPP12273 146 aaPredicted RBP11.36□□□□□ -0.59
HLCS-207ENST00000612277 ELAVL3Q14576 367 aaKnown RBP11.36□□□□□ -0.59
HLCS-207ENST00000612277 LYSMD4Q5XG99 296 aa11.36□□□□□ -0.59
HLCS-207ENST00000612277 LBX2Q6XYB7 198 aa11.36□□□□□ -0.59
HLCS-207ENST00000612277 RNF39Q9H2S5 420 aa11.36□□□□□ -0.59
HLCS-207ENST00000612277 PRSS1P07477 247 aa11.36□□□□□ -0.59
HLCS-207ENST00000612277 EN2P19622 333 aaPredicted RBP11.36□□□□□ -0.59
HLCS-207ENST00000612277 COL9A2Q14055 689 aaPredicted RBP11.36□□□□□ -0.59
HLCS-207ENST00000612277 KIR2DS3Q14952 304 aa11.36□□□□□ -0.59
HLCS-207ENST00000612277 SSX1Q16384 188 aa11.36□□□□□ -0.59
HLCS-207ENST00000612277 ZNF542PQ5EBM4 170 aa11.36□□□□□ -0.59
HLCS-207ENST00000612277 C6orf201Q7Z4U5 140 aa11.36□□□□□ -0.59
HLCS-207ENST00000612277 MISPQ8IVT2 679 aa11.36□□□□□ -0.59
HLCS-207ENST00000612277 OR10AD1Q8NGE0 317 aa11.36□□□□□ -0.59
HLCS-207ENST00000612277 TMEM230Q96A57 120 aa11.36□□□□□ -0.59
HLCS-207ENST00000612277 C3orf30Q96M34 536 aa11.36□□□□□ -0.59
HLCS-207ENST00000612277 RSG1Q9BU20 258 aa11.36□□□□□ -0.59
HLCS-207ENST00000612277 RTL8AQ9BWD3 113 aa11.36□□□□□ -0.59
HLCS-207ENST00000612277 NCMAPQ5T1S8 102 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms