RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 ANKRD37Q7Z713 158 aa11.86□□□□□ -0.51
TCF3-220ENST00000611869 LSRQ86X29 649 aaPredicted RBP11.86□□□□□ -0.51
TCF3-220ENST00000611869 BOLLQ8N9W6 283 aaKnown RBP11.86□□□□□ -0.51
TCF3-220ENST00000611869 GNRHR2Q96P88 292 aa11.86□□□□□ -0.51
TCF3-220ENST00000611869 MIXL1Q9H2W2 232 aa11.86□□□□□ -0.51
TCF3-220ENST00000611869 PLSCR3Q9NRY6 295 aa11.86□□□□□ -0.51
TCF3-220ENST00000611869 EMC3Q9P0I2 261 aa11.86□□□□□ -0.51
TCF3-220ENST00000611869 A0A0A6YYH2 397 aa11.85□□□□□ -0.51
TCF3-220ENST00000611869 A6NJ64 397 aa11.85□□□□□ -0.51
TCF3-220ENST00000611869 IMPA2O14732 288 aa11.85□□□□□ -0.51
TCF3-220ENST00000611869 CLDN6P56747 220 aa11.85□□□□□ -0.51
TCF3-220ENST00000611869 CD276Q5ZPR3 534 aa11.85□□□□□ -0.51
TCF3-220ENST00000611869 RHBDD2Q6NTF9 364 aa11.85□□□□□ -0.51
TCF3-220ENST00000611869 ALKAL2Q6UX46 152 aa11.85□□□□□ -0.51
TCF3-220ENST00000611869 ATG4DQ86TL0 474 aaPredicted RBP11.85□□□□□ -0.51
TCF3-220ENST00000611869 SGPP2Q8IWX5 399 aa11.85□□□□□ -0.51
TCF3-220ENST00000611869 CNEP1R1Q8N9A8 125 aa11.85□□□□□ -0.51
TCF3-220ENST00000611869 NPEPL1Q8NDH3 523 aa11.85□□□□□ -0.51
TCF3-220ENST00000611869 FAM71CQ8NEG0 241 aa11.85□□□□□ -0.51
TCF3-220ENST00000611869 MENTQ9BUN1 341 aa11.85□□□□□ -0.51
TCF3-220ENST00000611869 RNF32Q9H0A6 362 aa11.85□□□□□ -0.51
TCF3-220ENST00000611869 ARRDC1-AS1Q9H2J1 176 aa11.85□□□□□ -0.51
TCF3-220ENST00000611869 TMEM74BQ9NUR3 256 aa11.85□□□□□ -0.51
TCF3-220ENST00000611869 LSM5Q9Y4Y9 91 aaKnown RBP11.85□□□□□ -0.51
TCF3-220ENST00000611869 LRP12Q9Y561 859 aa11.85□□□□□ -0.51
TCF3-220ENST00000611869 R4GMQ9 66 aa11.85□□□□□ -0.51
TCF3-220ENST00000611869 INHBBP09529 407 aa11.85□□□□□ -0.51
TCF3-220ENST00000611869 MSR1P21757 451 aa11.85□□□□□ -0.51
TCF3-220ENST00000611869 SEC61A1P61619 476 aaKnown RBP11.85□□□□□ -0.51
TCF3-220ENST00000611869 STK11Q15831 433 aa11.85□□□□□ -0.51
TCF3-220ENST00000611869 PRR18Q8N4B5 295 aa11.85□□□□□ -0.51
TCF3-220ENST00000611869 CPT1CQ8TCG5 803 aa11.85□□□□□ -0.51
TCF3-220ENST00000611869 C11orf40Q8WZ69 217 aa11.85□□□□□ -0.51
TCF3-220ENST00000611869 ARL5BQ96KC2 179 aa11.85□□□□□ -0.51
TCF3-220ENST00000611869 LOXL2Q9Y4K0 774 aa11.85□□□□□ -0.51
TCF3-220ENST00000611869 TSC2P49815 1807 aa11.85□□□□□ -0.51
TCF3-220ENST00000611869 CXCL13O43927 109 aa11.85□□□□□ -0.51
TCF3-220ENST00000611869 LINC00271P0C7V0 271 aa11.85□□□□□ -0.51
TCF3-220ENST00000611869 ATP1B3P54709 279 aa11.85□□□□□ -0.51
TCF3-220ENST00000611869 EXOSC6Q5RKV6 272 aaKnown RBP11.85□□□□□ -0.51
TCF3-220ENST00000611869 CCDC54Q8NEL0 328 aa11.85□□□□□ -0.51
TCF3-220ENST00000611869 OR1M1Q8NGA1 313 aa11.85□□□□□ -0.51
TCF3-220ENST00000611869 OR10K1Q8NGX5 313 aa11.85□□□□□ -0.51
TCF3-220ENST00000611869 SMIM4Q8WVI0 70 aa11.85□□□□□ -0.51
TCF3-220ENST00000611869 SCARF2Q96GP6 870 aaPredicted RBP11.85□□□□□ -0.51
TCF3-220ENST00000611869 ABHD1Q96SE0 405 aa11.85□□□□□ -0.51
TCF3-220ENST00000611869 CMSS1Q9BQ75 279 aaKnown RBP11.85□□□□□ -0.51
TCF3-220ENST00000611869 MYOTQ9UBF9 498 aa11.85□□□□□ -0.51
TCF3-220ENST00000611869 STMND1H3BQB6 276 aa11.85□□□□□ -0.51
TCF3-220ENST00000611869 MPZL1O95297 269 aa11.85□□□□□ -0.51
TCF3-220ENST00000611869 PMP2P02689 132 aa11.85□□□□□ -0.51
TCF3-220ENST00000611869 C1QBP02746 253 aa11.85□□□□□ -0.51
TCF3-220ENST00000611869 NAGAP17050 411 aa11.85□□□□□ -0.51
TCF3-220ENST00000611869 TAS2R31P59538 309 aa11.85□□□□□ -0.51
TCF3-220ENST00000611869 GNMTQ14749 295 aa11.85□□□□□ -0.51
TCF3-220ENST00000611869 OPCMLQ14982 345 aa11.85□□□□□ -0.51
TCF3-220ENST00000611869 DMKNQ6E0U4 476 aaPredicted RBP11.85□□□□□ -0.51
TCF3-220ENST00000611869 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.85□□□□□ -0.51
TCF3-220ENST00000611869 BATF2Q8N1L9 274 aa11.85□□□□□ -0.51
TCF3-220ENST00000611869 D2HGDHQ8N465 521 aa11.85□□□□□ -0.51
TCF3-220ENST00000611869 ZNF436Q9C0F3 470 aaPredicted RBP11.85□□□□□ -0.51
TCF3-220ENST00000611869 QPCTLQ9NXS2 382 aa11.85□□□□□ -0.51
TCF3-220ENST00000611869 PIGLQ9Y2B2 252 aa11.85□□□□□ -0.51
TCF3-220ENST00000611869 V9GYH0 126 aa11.85□□□□□ -0.51
TCF3-220ENST00000611869 TEX46H3BTG2 121 aa11.84□□□□□ -0.51
TCF3-220ENST00000611869 GUSBP08236 651 aa11.84□□□□□ -0.51
TCF3-220ENST00000611869 CD46P15529 392 aa11.84□□□□□ -0.51
TCF3-220ENST00000611869 CYCSP99999 105 aaKnown RBP11.84□□□□□ -0.51
TCF3-220ENST00000611869 CDONQ4KMG0 1287 aa11.84□□□□□ -0.51
TCF3-220ENST00000611869 RNLSQ5VYX0 342 aa11.84□□□□□ -0.51
TCF3-220ENST00000611869 MAMSTRQ6ZN01 415 aa11.84□□□□□ -0.51
TCF3-220ENST00000611869 NANOS1Q8WY41 292 aaKnown RBP11.84□□□□□ -0.51
TCF3-220ENST00000611869 OXGR1Q96P68 337 aa11.84□□□□□ -0.51
TCF3-220ENST00000611869 SYT3Q9BQG1 590 aa11.84□□□□□ -0.51
TCF3-220ENST00000611869 METTL9Q9H1A3 318 aa11.84□□□□□ -0.51
TCF3-220ENST00000611869 HEATR5BQ9P2D3 2071 aa11.84□□□□□ -0.51
TCF3-220ENST00000611869 VAMP5O95183 116 aa11.84□□□□□ -0.51
TCF3-220ENST00000611869 HRGP04196 525 aa11.84□□□□□ -0.51
TCF3-220ENST00000611869 SMIM10L1P0DMW3 83 aa11.84□□□□□ -0.51
TCF3-220ENST00000611869 RAD52P43351 418 aa11.84□□□□□ -0.51
TCF3-220ENST00000611869 MEX3BQ6ZN04 569 aaKnown RBP11.84□□□□□ -0.51
TCF3-220ENST00000611869 SULF2Q8IWU5 870 aa11.84□□□□□ -0.51
TCF3-220ENST00000611869 SPAG16Q8N0X2 631 aa11.84□□□□□ -0.51
TCF3-220ENST00000611869 NUDCD2Q8WVJ2 157 aa11.84□□□□□ -0.51
TCF3-220ENST00000611869 NINJ1Q92982 152 aa11.84□□□□□ -0.51
TCF3-220ENST00000611869 SMIM10Q96HG1 83 aa11.84□□□□□ -0.51
TCF3-220ENST00000611869 C4orf45Q96LM5 186 aa11.84□□□□□ -0.51
TCF3-220ENST00000611869 PPA2Q9H2U2 334 aa11.84□□□□□ -0.51
TCF3-220ENST00000611869 CCDC86Q9H6F5 360 aaKnown RBP11.84□□□□□ -0.51
TCF3-220ENST00000611869 GDF2Q9UK05 429 aaPredicted RBP11.84□□□□□ -0.51
TCF3-220ENST00000611869 SIRT4Q9Y6E7 314 aaPredicted RBP11.84□□□□□ -0.51
TCF3-220ENST00000611869 SGCEO43556 437 aa11.84□□□□□ -0.51
TCF3-220ENST00000611869 MSL3P1P0C860 447 aa11.84□□□□□ -0.51
TCF3-220ENST00000611869 POU3F3P20264 500 aaPredicted RBP11.84□□□□□ -0.51
TCF3-220ENST00000611869 GALP22466 123 aa11.84□□□□□ -0.51
TCF3-220ENST00000611869 GRB2P62993 217 aaKnown RBP11.84□□□□□ -0.51
TCF3-220ENST00000611869 GUCA2AQ02747 115 aa11.84□□□□□ -0.51
TCF3-220ENST00000611869 BCL2A1Q16548 175 aa11.84□□□□□ -0.51
TCF3-220ENST00000611869 TMEM91Q6ZNR0 172 aa11.84□□□□□ -0.51
TCF3-220ENST00000611869 GDF15Q99988 308 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms