RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 TRPM6Q9BX84 2022 aa11.96□□□□□ -0.49
USP6NL-205ENST00000609104 MFSD12Q6NUT3 480 aa11.96□□□□□ -0.49
USP6NL-205ENST00000609104 C12orf10Q9HB07 376 aa11.96□□□□□ -0.49
USP6NL-205ENST00000609104 ABCD4O14678 606 aa11.96□□□□□ -0.5
USP6NL-205ENST00000609104 SLCO2B1O94956 709 aa11.96□□□□□ -0.5
USP6NL-205ENST00000609104 IGHEP01854 428 aa11.96□□□□□ -0.5
USP6NL-205ENST00000609104 SMIM18P0DKX4 95 aa11.96□□□□□ -0.5
USP6NL-205ENST00000609104 NPPBP16860 134 aa11.96□□□□□ -0.5
USP6NL-205ENST00000609104 KIAA1456Q9P272 454 aa11.96□□□□□ -0.5
USP6NL-205ENST00000609104 LRRC37A3O60309 1634 aa11.96□□□□□ -0.5
USP6NL-205ENST00000609104 SYT5O00445 386 aa11.96□□□□□ -0.5
USP6NL-205ENST00000609104 GPR85P60893 370 aa11.96□□□□□ -0.5
USP6NL-205ENST00000609104 LIPNQ5VXI9 398 aa11.96□□□□□ -0.5
USP6NL-205ENST00000609104 ADAMTSL4Q6UY14 1074 aa11.96□□□□□ -0.5
USP6NL-205ENST00000609104 SLC5A6Q9Y289 635 aa11.96□□□□□ -0.5
USP6NL-205ENST00000609104 A0A087WV62 115 aa11.96□□□□□ -0.5
USP6NL-205ENST00000609104 IGHV3-20A0A0C4DH32 117 aa11.96□□□□□ -0.5
USP6NL-205ENST00000609104 H7BYZ3 331 aa11.96□□□□□ -0.5
USP6NL-205ENST00000609104 MT-ATP6P00846 226 aa11.96□□□□□ -0.5
USP6NL-205ENST00000609104 HSF1Q00613 529 aa11.96□□□□□ -0.5
USP6NL-205ENST00000609104 C17orf99Q6UX52 265 aa11.96□□□□□ -0.5
USP6NL-205ENST00000609104 TSLPQ969D9 159 aa11.96□□□□□ -0.5
USP6NL-205ENST00000609104 BARX1Q9HBU1 254 aaPredicted RBP11.96□□□□□ -0.5
USP6NL-205ENST00000609104 OR2F2O95006 317 aa11.96□□□□□ -0.5
USP6NL-205ENST00000609104 OR2F1Q13607 317 aa11.96□□□□□ -0.5
USP6NL-205ENST00000609104 EXOSC2Q13868 293 aaKnown RBP11.96□□□□□ -0.5
USP6NL-205ENST00000609104 OR51F2Q8NH61 342 aa11.96□□□□□ -0.5
USP6NL-205ENST00000609104 ACTR3CQ9C0K3 210 aaPredicted RBP11.96□□□□□ -0.5
USP6NL-205ENST00000609104 GOLT1BQ9Y3E0 138 aa11.96□□□□□ -0.5
USP6NL-205ENST00000609104 HCFC2Q9Y5Z7 792 aa11.96□□□□□ -0.5
USP6NL-205ENST00000609104 RAF1P04049 648 aa11.95□□□□□ -0.5
USP6NL-205ENST00000609104 ZNF629Q9UEG4 869 aaPredicted RBP11.95□□□□□ -0.5
USP6NL-205ENST00000609104 LAMB1P07942 1786 aa11.95□□□□□ -0.5
USP6NL-205ENST00000609104 TAAR5O14804 337 aa11.95□□□□□ -0.5
USP6NL-205ENST00000609104 OR7C2O60412 319 aa11.95□□□□□ -0.5
USP6NL-205ENST00000609104 QDPRP09417 244 aa11.95□□□□□ -0.5
USP6NL-205ENST00000609104 SBK2P0C263 348 aa11.95□□□□□ -0.5
USP6NL-205ENST00000609104 SLC25A6P12236 298 aa11.95□□□□□ -0.5
USP6NL-205ENST00000609104 DGCR2P98153 550 aa11.95□□□□□ -0.5
USP6NL-205ENST00000609104 PELI3Q8N2H9 469 aa11.95□□□□□ -0.5
USP6NL-205ENST00000609104 OR2AE1Q8NHA4 323 aa11.95□□□□□ -0.5
USP6NL-205ENST00000609104 FLVCR2Q9UPI3 526 aa11.95□□□□□ -0.5
USP6NL-205ENST00000609104 HRO43593 1189 aa11.95□□□□□ -0.5
USP6NL-205ENST00000609104 ZNF354AO60765 605 aaPredicted RBP11.95□□□□□ -0.5
USP6NL-205ENST00000609104 OR5G3P0C626 314 aa11.95□□□□□ -0.5
USP6NL-205ENST00000609104 SLC19A1P41440 591 aa11.95□□□□□ -0.5
USP6NL-205ENST00000609104 CTU2Q2VPK5 515 aaKnown RBP11.95□□□□□ -0.5
USP6NL-205ENST00000609104 TMED6Q8WW62 240 aa11.95□□□□□ -0.5
USP6NL-205ENST00000609104 SEMA4CQ9C0C4 833 aa11.95□□□□□ -0.5
USP6NL-205ENST00000609104 EPHX3Q9H6B9 360 aa11.95□□□□□ -0.5
USP6NL-205ENST00000609104 GAR1Q9NY12 217 aaKnown RBP11.95□□□□□ -0.5
USP6NL-205ENST00000609104 RNF150Q9ULK6 438 aa11.95□□□□□ -0.5
USP6NL-205ENST00000609104 SOCS7O14512 581 aa11.95□□□□□ -0.5
USP6NL-205ENST00000609104 TERTO14746 1132 aaKnown RBP11.95□□□□□ -0.5
USP6NL-205ENST00000609104 PAQR9Q6ZVX9 377 aa11.95□□□□□ -0.5
USP6NL-205ENST00000609104 ADGRG3Q86Y34 549 aa11.95□□□□□ -0.5
USP6NL-205ENST00000609104 OR13C5Q8NGS8 318 aa11.95□□□□□ -0.5
USP6NL-205ENST00000609104 SPACA5Q96QH8 159 aa11.95□□□□□ -0.5
USP6NL-205ENST00000609104 LYSMD1Q96S90 227 aa11.95□□□□□ -0.5
USP6NL-205ENST00000609104 SH2D1BO14796 132 aa11.95□□□□□ -0.5
USP6NL-205ENST00000609104 CTNSO60931 367 aa11.95□□□□□ -0.5
USP6NL-205ENST00000609104 CT45A10P0DMU9 189 aa11.95□□□□□ -0.5
USP6NL-205ENST00000609104 RPL13AP40429 203 aaKnown RBP11.95□□□□□ -0.5
USP6NL-205ENST00000609104 OR51E1Q8TCB6 317 aa11.95□□□□□ -0.5
USP6NL-205ENST00000609104 NUMBLQ9Y6R0 609 aa11.95□□□□□ -0.5
USP6NL-205ENST00000609104 SEMG1P04279 462 aa11.95□□□□□ -0.5
USP6NL-205ENST00000609104 ADRA2CP18825 462 aa11.95□□□□□ -0.5
USP6NL-205ENST00000609104 GPR12P47775 334 aa11.95□□□□□ -0.5
USP6NL-205ENST00000609104 ACOT6Q3I5F7 207 aaPredicted RBP11.95□□□□□ -0.5
USP6NL-205ENST00000609104 DOK3Q7L591 496 aa11.95□□□□□ -0.5
USP6NL-205ENST00000609104 C11orf42Q8N5U0 333 aa11.95□□□□□ -0.5
USP6NL-205ENST00000609104 HS3ST2Q9Y278 367 aa11.95□□□□□ -0.5
USP6NL-205ENST00000609104 SCO1O75880 301 aa11.95□□□□□ -0.5
USP6NL-205ENST00000609104 MBLAC1A4D2B0 266 aaPredicted RBP11.95□□□□□ -0.5
USP6NL-205ENST00000609104 WDR88Q6ZMY6 472 aa11.95□□□□□ -0.5
USP6NL-205ENST00000609104 TMEM43Q9BTV4 400 aa11.95□□□□□ -0.5
USP6NL-205ENST00000609104 SIT1Q9Y3P8 196 aa11.95□□□□□ -0.5
USP6NL-205ENST00000609104 RFPL4AA6NLU0 287 aa11.95□□□□□ -0.5
USP6NL-205ENST00000609104 RFPL4AL1F8VTS6 287 aa11.95□□□□□ -0.5
USP6NL-205ENST00000609104 K7ESM1 405 aa11.95□□□□□ -0.5
USP6NL-205ENST00000609104 PTBP1P26599 531 aaKnown RBP eCLIP11.95□□□□□ -0.58e-7■■■■■ 29.9
USP6NL-205ENST00000609104 GP2P55259 537 aaKnown RBP11.95□□□□□ -0.5
USP6NL-205ENST00000609104 GRINAQ7Z429 371 aa11.95□□□□□ -0.5
USP6NL-205ENST00000609104 TGFBR1P36897 503 aa11.94□□□□□ -0.5
USP6NL-205ENST00000609104 CYB561P49447 251 aa11.94□□□□□ -0.5
USP6NL-205ENST00000609104 RBP2P50120 134 aa11.94□□□□□ -0.5
USP6NL-205ENST00000609104 ENDOGQ14249 297 aaKnown RBP11.94□□□□□ -0.5
USP6NL-205ENST00000609104 TMEM207Q6UWW9 146 aa11.94□□□□□ -0.5
USP6NL-205ENST00000609104 CRYGNQ8WXF5 182 aa11.94□□□□□ -0.5
USP6NL-205ENST00000609104 CSF3RQ99062 836 aa11.94□□□□□ -0.5
USP6NL-205ENST00000609104 STACQ99469 402 aa11.94□□□□□ -0.5
USP6NL-205ENST00000609104 HDAC8Q9BY41 377 aa11.94□□□□□ -0.5
USP6NL-205ENST00000609104 ZNF346Q9UL40 294 aaKnown RBP11.94□□□□□ -0.5
USP6NL-205ENST00000609104 HRH1P35367 487 aa11.94□□□□□ -0.5
USP6NL-205ENST00000609104 SLC39A13Q96H72 371 aa11.94□□□□□ -0.5
USP6NL-205ENST00000609104 ZNF768Q9H5H4 540 aaKnown RBP11.94□□□□□ -0.5
USP6NL-205ENST00000609104 LTB4R2Q9NPC1 389 aa11.94□□□□□ -0.5
USP6NL-205ENST00000609104 ACER3Q9NUN7 267 aa11.94□□□□□ -0.5
USP6NL-205ENST00000609104 BAMBIQ13145 260 aa11.94□□□□□ -0.5
USP6NL-205ENST00000609104 YRDCQ86U90 279 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms