RNA–Protein interactions for RNA: ENST00000603639.5

NEB-218, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 25,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-218ENST00000603639 MEF2CQ06413 473 aaPredicted RBP3.11□□□□□ -1.91
NEB-218ENST00000603639 BOP1Q14137 746 aaKnown RBP3.11□□□□□ -1.91
NEB-218ENST00000603639 PLPP4Q5VZY2 271 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 DHRS13Q6UX07 377 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 C17orf107Q6ZR85 190 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 ACOT4Q8N9L9 421 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 GJD4Q96KN9 370 aaPredicted RBP3.11□□□□□ -1.91
NEB-218ENST00000603639 HYAL1Q12794 435 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 GAGE2BQ13066 116 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 TARBP2Q15633 366 aaKnown RBP3.11□□□□□ -1.91
NEB-218ENST00000603639 CD300EQ496F6 205 aaPredicted RBP3.11□□□□□ -1.91
NEB-218ENST00000603639 GAGE2EQ4V326 116 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 SAXO2Q658L1 398 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 ALKAL2Q6UX46 152 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 TMEM150AQ86TG1 271 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 OR4D6Q8NGJ1 314 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 HRASLS2Q9NWW9 162 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 RHCGQ9UBD6 479 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 GAGE2DQ9UEU5 116 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 SLC7A7Q9UM01 511 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 EFSO43281 561 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 FUT3P21217 361 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 NTSR1P30989 418 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 DCTDP32321 178 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 LIPAP38571 399 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 SPINT3P49223 89 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 ZNF506Q5JVG8 444 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 RBMXL3Q8N7X1 1067 aaKnown RBP3.11□□□□□ -1.91
NEB-218ENST00000603639 NPVFQ9HCQ7 196 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 A8MXK9 166 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 PLA2G10O15496 165 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 C8AP07357 584 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 ZNF728P0DKX0 622 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 SMAD3P84022 425 aaKnown RBP3.11□□□□□ -1.91
NEB-218ENST00000603639 PIM3Q86V86 326 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 WDFY2Q96P53 400 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 UQCR10Q9UDW1 63 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 J3KR12 359 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 SOD3P08294 240 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 RAD52P43351 418 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 GAB4Q2WGN9 574 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 MAMDC4Q6UXC1 1216 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 TEX29Q8N6K0 151 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 COX18Q8N8Q8 333 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 PNPLA1Q8N8W4 532 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 EXOSC8Q96B26 276 aaKnown RBP3.11□□□□□ -1.91
NEB-218ENST00000603639 C3orf30Q96M34 536 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 HERPUD2Q9BSE4 406 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 AHDC1Q5TGY3 1603 aaPredicted RBP3.11□□□□□ -1.91
NEB-218ENST00000603639 EDDM13A0A1B0GTR0 161 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 CD8B2A6NJW9 211 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 MPPED1O15442 326 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 HPNP05981 417 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 CD8BP10966 210 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 PBLDP30039 288 aaPredicted RBP3.11□□□□□ -1.91
NEB-218ENST00000603639 RPS15AP62244 130 aaKnown RBP3.11□□□□□ -1.91
NEB-218ENST00000603639 USP50Q70EL3 339 aaPredicted RBP3.11□□□□□ -1.91
NEB-218ENST00000603639 RPS19BP1Q86WX3 136 aaKnown RBP3.11□□□□□ -1.91
NEB-218ENST00000603639 H3BMH7 237 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 ZBTB25P24278 435 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 AKT2P31751 481 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 SSR2P43308 183 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 PARM1Q6UWI2 310 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 ORAOV1Q8WV07 137 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 NDRG1Q92597 394 aaKnown RBP3.11□□□□□ -1.91
NEB-218ENST00000603639 ASAH2Q9NR71 780 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 HS3ST3A1Q9Y663 406 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 CH25HO95992 272 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 SOD1P00441 154 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 RPL38P63173 70 aaKnown RBP3.11□□□□□ -1.91
NEB-218ENST00000603639 NSDHLQ15738 373 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 Q499Y3 187 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 SPANXN4Q5MJ08 99 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 ZNF573Q86YE8 665 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 TMED6Q8WW62 240 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 NIPSNAP1Q9BPW8 284 aa3.11□□□□□ -1.91
NEB-218ENST00000603639 PRSS23O95084 383 aa3.1□□□□□ -1.91
NEB-218ENST00000603639 EPPINO95925 133 aa3.1□□□□□ -1.91
NEB-218ENST00000603639 ZNF17P17021 662 aa3.1□□□□□ -1.91
NEB-218ENST00000603639 HOXC12P31275 282 aa3.1□□□□□ -1.91
NEB-218ENST00000603639 PTGER4P35408 488 aa3.1□□□□□ -1.91
NEB-218ENST00000603639 APOBEC1P41238 236 aaKnown RBP3.1□□□□□ -1.91
NEB-218ENST00000603639 PPICP45877 212 aa3.1□□□□□ -1.91
NEB-218ENST00000603639 OR3A1P47881 315 aa3.1□□□□□ -1.91
NEB-218ENST00000603639 PNLIPRP2P54317 469 aa3.1□□□□□ -1.91
NEB-218ENST00000603639 MYBPHQ13203 477 aa3.1□□□□□ -1.91
NEB-218ENST00000603639 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.1□□□□□ -1.91
NEB-218ENST00000603639 FAM213BQ8TBF2 198 aa3.1□□□□□ -1.91
NEB-218ENST00000603639 ALKBH3Q96Q83 286 aaPredicted RBP3.1□□□□□ -1.91
NEB-218ENST00000603639 A0A087WWC5 75 aa3.1□□□□□ -1.91
NEB-218ENST00000603639 MYBPHLA2RUH7 354 aa3.1□□□□□ -1.91
NEB-218ENST00000603639 DUSP11O75319 330 aaKnown RBP3.1□□□□□ -1.91
NEB-218ENST00000603639 ADH5P11766 374 aa3.1□□□□□ -1.91
NEB-218ENST00000603639 Q6ZN92 141 aa3.1□□□□□ -1.91
NEB-218ENST00000603639 OR8G5Q8NG78 346 aa3.1□□□□□ -1.91
NEB-218ENST00000603639 LHX6Q9UPM6 363 aa3.1□□□□□ -1.91
NEB-218ENST00000603639 SSUH2Q9Y2M2 353 aa3.1□□□□□ -1.91
NEB-218ENST00000603639 RPA2P15927 270 aa3.1□□□□□ -1.91
NEB-218ENST00000603639 AOAHP28039 575 aa3.1□□□□□ -1.91
NEB-218ENST00000603639 SSTR2P30874 369 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms