RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 TRAPPC2LH3BP13 241 aa11.08□□□□□ -0.64
RPS28-204ENST00000602140 CXCR6O00574 342 aa11.08□□□□□ -0.64
RPS28-204ENST00000602140 GSTA4O15217 222 aa11.08□□□□□ -0.64
RPS28-204ENST00000602140 AHCYL1O43865 530 aa11.08□□□□□ -0.64
RPS28-204ENST00000602140 SASH3O75995 380 aa11.08□□□□□ -0.64
RPS28-204ENST00000602140 H2AFXP16104 143 aaPredicted RBP11.08□□□□□ -0.64
RPS28-204ENST00000602140 CTLA4P16410 223 aa11.08□□□□□ -0.64
RPS28-204ENST00000602140 SLC6A9P48067 706 aa11.08□□□□□ -0.64
RPS28-204ENST00000602140 ERFP50548 548 aa11.08□□□□□ -0.64
RPS28-204ENST00000602140 BTG1P62324 171 aa11.08□□□□□ -0.64
RPS28-204ENST00000602140 LIPEQ05469 1076 aa11.08□□□□□ -0.64
RPS28-204ENST00000602140 ZNF154Q13106 437 aa11.08□□□□□ -0.64
RPS28-204ENST00000602140 AQP6Q13520 282 aa11.08□□□□□ -0.64
RPS28-204ENST00000602140 ZMYND11Q15326 602 aa11.08□□□□□ -0.64
RPS28-204ENST00000602140 TMEM155Q4W5P6 130 aa11.08□□□□□ -0.64
RPS28-204ENST00000602140 ARMCX4Q5H9R4 360 aa11.08□□□□□ -0.64
RPS28-204ENST00000602140 RBMS3Q6XE24 437 aaKnown RBP11.08□□□□□ -0.64
RPS28-204ENST00000602140 CBLL1Q75N03 491 aa11.08□□□□□ -0.64
RPS28-204ENST00000602140 FAM122BQ7Z309 247 aa11.08□□□□□ -0.64
RPS28-204ENST00000602140 ARPINQ7Z6K5 226 aa11.08□□□□□ -0.64
RPS28-204ENST00000602140 SIGLECL1Q8N7X8 197 aa11.08□□□□□ -0.64
RPS28-204ENST00000602140 PTP4A1Q93096 173 aa11.08□□□□□ -0.64
RPS28-204ENST00000602140 POP5Q969H6 163 aaKnown RBP11.08□□□□□ -0.64
RPS28-204ENST00000602140 RASD2Q96D21 266 aa11.08□□□□□ -0.64
RPS28-204ENST00000602140 OR2V2Q96R30 315 aa11.08□□□□□ -0.64
RPS28-204ENST00000602140 SIGLEC11Q96RL6 698 aa11.08□□□□□ -0.64
RPS28-204ENST00000602140 IL19Q9UHD0 177 aa11.08□□□□□ -0.64
RPS28-204ENST00000602140 NUP50Q9UKX7 468 aa11.08□□□□□ -0.64
RPS28-204ENST00000602140 PPP1R3CQ9UQK1 317 aa11.08□□□□□ -0.64
RPS28-204ENST00000602140 POLR3KQ9Y2Y1 108 aaPredicted RBP11.08□□□□□ -0.64
RPS28-204ENST00000602140 INSIG2Q9Y5U4 225 aa11.08□□□□□ -0.64
RPS28-204ENST00000602140 AUP1Q9Y679 476 aa11.08□□□□□ -0.64
RPS28-204ENST00000602140 SURF4O15260 269 aa11.07□□□□□ -0.64
RPS28-204ENST00000602140 SLC16A7O60669 478 aa11.07□□□□□ -0.64
RPS28-204ENST00000602140 SERPINA1P01009 418 aa11.07□□□□□ -0.64
RPS28-204ENST00000602140 ZNF12P17014 697 aa11.07□□□□□ -0.64
RPS28-204ENST00000602140 GUCY1A3Q02108 690 aa11.07□□□□□ -0.64
RPS28-204ENST00000602140 KRR1Q13601 381 aaKnown RBP11.07□□□□□ -0.64
RPS28-204ENST00000602140 KLF17Q5JT82 389 aaPredicted RBP11.07□□□□□ -0.64
RPS28-204ENST00000602140 GLB1L2Q8IW92 636 aa11.07□□□□□ -0.64
RPS28-204ENST00000602140 OR5AS1Q8N127 324 aa11.07□□□□□ -0.64
RPS28-204ENST00000602140 ATG16L2Q8NAA4 619 aa11.07□□□□□ -0.64
RPS28-204ENST00000602140 FAM46AQ96IP4 442 aaKnown RBP11.07□□□□□ -0.64
RPS28-204ENST00000602140 HSH2DQ96JZ2 352 aa11.07□□□□□ -0.64
RPS28-204ENST00000602140 COG8Q96MW5 612 aa11.07□□□□□ -0.64
RPS28-204ENST00000602140 DUX5Q96PT3 197 aa11.07□□□□□ -0.64
RPS28-204ENST00000602140 MRI1Q9BV20 369 aa11.07□□□□□ -0.64
RPS28-204ENST00000602140 NDEL1Q9GZM8 345 aa11.07□□□□□ -0.64
RPS28-204ENST00000602140 SYT4Q9H2B2 425 aa11.07□□□□□ -0.64
RPS28-204ENST00000602140 NMNAT1Q9HAN9 279 aaPredicted RBP11.07□□□□□ -0.64
RPS28-204ENST00000602140 ASH2LQ9UBL3 628 aa11.07□□□□□ -0.64
RPS28-204ENST00000602140 ZNF69Q9UC07 566 aa11.07□□□□□ -0.64
RPS28-204ENST00000602140 TMEM5Q9Y2B1 443 aa11.07□□□□□ -0.64
RPS28-204ENST00000602140 COA3Q9Y2R0 106 aaPredicted RBP11.07□□□□□ -0.64
RPS28-204ENST00000602140 PCDHGB1Q9Y5G3 927 aa11.07□□□□□ -0.64
RPS28-204ENST00000602140 OR6C6A6NF89 314 aa11.06□□□□□ -0.64
RPS28-204ENST00000602140 A8MXK9 166 aa11.06□□□□□ -0.64
RPS28-204ENST00000602140 F5H0A9 414 aaPredicted RBP11.06□□□□□ -0.64
RPS28-204ENST00000602140 TMEM178BH3BS89 294 aa11.06□□□□□ -0.64
RPS28-204ENST00000602140 NME4O00746 187 aa11.06□□□□□ -0.64
RPS28-204ENST00000602140 IMPA2O14732 288 aa11.06□□□□□ -0.64
RPS28-204ENST00000602140 SLC22A2O15244 555 aa11.06□□□□□ -0.64
RPS28-204ENST00000602140 WIPF1O43516 503 aa11.06□□□□□ -0.64
RPS28-204ENST00000602140 KHDRBS3O75525 346 aaKnown RBP11.06□□□□□ -0.64
RPS28-204ENST00000602140 NDUFB2O95178 105 aa11.06□□□□□ -0.64
RPS28-204ENST00000602140 DBHP09172 617 aa11.06□□□□□ -0.64
RPS28-204ENST00000602140 HKR1P10072 659 aa11.06□□□□□ -0.64
RPS28-204ENST00000602140 RAC2P15153 192 aa11.06□□□□□ -0.64
RPS28-204ENST00000602140 SDHAP31040 664 aa11.06□□□□□ -0.64
RPS28-204ENST00000602140 MDH2P40926 338 aaKnown RBP11.06□□□□□ -0.64
RPS28-204ENST00000602140 SLC7A2P52569 658 aa11.06□□□□□ -0.64
RPS28-204ENST00000602140 LSM6P62312 80 aaKnown RBP11.06□□□□□ -0.64
RPS28-204ENST00000602140 HLXQ14774 488 aaPredicted RBP11.06□□□□□ -0.64
RPS28-204ENST00000602140 TUSC1Q2TAM9 212 aa11.06□□□□□ -0.64
RPS28-204ENST00000602140 CCDC92Q53HC0 331 aaPredicted RBP11.06□□□□□ -0.64
RPS28-204ENST00000602140 ESCO2Q56NI9 601 aa11.06□□□□□ -0.64
RPS28-204ENST00000602140 DOK3Q7L591 496 aa11.06□□□□□ -0.64
RPS28-204ENST00000602140 TSEN54Q7Z6J9 526 aaKnown RBP11.06□□□□□ -0.64
RPS28-204ENST00000602140 CYP4Z1Q86W10 505 aa11.06□□□□□ -0.64
RPS28-204ENST00000602140 BCL6BQ8N143 479 aaPredicted RBP11.06□□□□□ -0.64
RPS28-204ENST00000602140 OR1F12Q8NHA8 337 aa11.06□□□□□ -0.64
RPS28-204ENST00000602140 RP9Q8TA86 221 aaKnown RBP11.06□□□□□ -0.64
RPS28-204ENST00000602140 SLC7A13Q8TCU3 470 aa11.06□□□□□ -0.64
RPS28-204ENST00000602140 C1QTNF5Q9BXJ0 243 aa11.06□□□□□ -0.64
RPS28-204ENST00000602140 ANKRD19PQ9H560 264 aa11.06□□□□□ -0.64
RPS28-204ENST00000602140 GCM1Q9NP62 436 aa11.06□□□□□ -0.64
RPS28-204ENST00000602140 PTTG3PQ9NZH4 202 aa11.06□□□□□ -0.64
RPS28-204ENST00000602140 IL20RAQ9UHF4 553 aa11.06□□□□□ -0.64
RPS28-204ENST00000602140 SIGLEC7Q9Y286 467 aa11.06□□□□□ -0.64
RPS28-204ENST00000602140 ENPP4Q9Y6X5 453 aa11.06□□□□□ -0.64
RPS28-204ENST00000602140 MEGF8Q7Z7M0 2845 aa11.06□□□□□ -0.64
RPS28-204ENST00000602140 DNAJC9-AS1A6NH13 148 aa11.05□□□□□ -0.64
RPS28-204ENST00000602140 CEACAM18A8MTB9 384 aa11.05□□□□□ -0.64
RPS28-204ENST00000602140 SOCS2O14508 198 aa11.05□□□□□ -0.64
RPS28-204ENST00000602140 RER1O15258 196 aa11.05□□□□□ -0.64
RPS28-204ENST00000602140 PTP4A3O75365 173 aa11.05□□□□□ -0.64
RPS28-204ENST00000602140 ZNF205O95201 554 aa11.05□□□□□ -0.64
RPS28-204ENST00000602140 COX4I1P13073 169 aa11.05□□□□□ -0.64
RPS28-204ENST00000602140 NCK1P16333 377 aa11.05□□□□□ -0.64
RPS28-204ENST00000602140 PRTN3P24158 256 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms