RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 ATG16L2Q8NAA4 619 aa13.98□□□□□ -0.17
USE1-208ENST00000600970 OR8B3Q8NGG8 313 aa13.98□□□□□ -0.17
USE1-208ENST00000600970 FNDC8Q8TC99 324 aa13.98□□□□□ -0.17
USE1-208ENST00000600970 SLC26A7Q8TE54 656 aa13.98□□□□□ -0.17
USE1-208ENST00000600970 TMEM239Q8WW34 195 aa13.98□□□□□ -0.17
USE1-208ENST00000600970 PTP4A1Q93096 173 aa13.98□□□□□ -0.17
USE1-208ENST00000600970 MEGF10Q96KG7 1140 aa13.98□□□□□ -0.17
USE1-208ENST00000600970 OR8B2Q96RD0 313 aa13.98□□□□□ -0.17
USE1-208ENST00000600970 EBF4Q9BQW3 602 aa13.98□□□□□ -0.17
USE1-208ENST00000600970 RNF114Q9Y508 228 aa13.98□□□□□ -0.17
USE1-208ENST00000600970 HTR5AP47898 357 aa13.97□□□□□ -0.17
USE1-208ENST00000600970 IDH3AP50213 366 aa13.97□□□□□ -0.17
USE1-208ENST00000600970 CRYBA2P53672 197 aa13.97□□□□□ -0.17
USE1-208ENST00000600970 SLC18A1P54219 525 aa13.97□□□□□ -0.17
USE1-208ENST00000600970 GUCY1A3Q02108 690 aa13.97□□□□□ -0.17
USE1-208ENST00000600970 HLXQ14774 488 aaPredicted RBP13.97□□□□□ -0.17
USE1-208ENST00000600970 TAF9Q16594 264 aa13.97□□□□□ -0.17
USE1-208ENST00000600970 ZNF404Q494X3 552 aa13.97□□□□□ -0.17
USE1-208ENST00000600970 OR5AS1Q8N127 324 aa13.97□□□□□ -0.17
USE1-208ENST00000600970 C10orf82Q8WW14 230 aa13.97□□□□□ -0.17
USE1-208ENST00000600970 MAGEB18Q96M61 343 aa13.97□□□□□ -0.17
USE1-208ENST00000600970 POLE4Q9NR33 117 aa13.97□□□□□ -0.17
USE1-208ENST00000600970 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.97□□□□□ -0.17
USE1-208ENST00000600970 HIF3AQ9Y2N7 669 aa13.97□□□□□ -0.17
USE1-208ENST00000600970 V9GYY5 206 aaPredicted RBP13.97□□□□□ -0.17
USE1-208ENST00000600970 DOK2O60496 412 aa13.96□□□□□ -0.17
USE1-208ENST00000600970 CLPXO76031 633 aa13.96□□□□□ -0.17
USE1-208ENST00000600970 TSPAN15O95858 294 aa13.96□□□□□ -0.17
USE1-208ENST00000600970 PITPNBP48739 271 aa13.96□□□□□ -0.17
USE1-208ENST00000600970 TAS2R41P59536 307 aa13.96□□□□□ -0.17
USE1-208ENST00000600970 PDCD1Q15116 288 aa13.96□□□□□ -0.17
USE1-208ENST00000600970 FAM201AQ5SY85 155 aa13.96□□□□□ -0.17
USE1-208ENST00000600970 DHDDSQ86SQ9 333 aa13.96□□□□□ -0.17
USE1-208ENST00000600970 CROCCP2Q86T23 111 aa13.96□□□□□ -0.17
USE1-208ENST00000600970 IGFN1Q86VF2 1251 aa13.96□□□□□ -0.17
USE1-208ENST00000600970 OR10AD1Q8NGE0 317 aa13.96□□□□□ -0.17
USE1-208ENST00000600970 LINC01006Q8NI28 216 aa13.96□□□□□ -0.17
USE1-208ENST00000600970 RASSF5Q8WWW0 418 aa13.96□□□□□ -0.17
USE1-208ENST00000600970 FAM71F1Q96KD3 344 aaPredicted RBP13.96□□□□□ -0.17
USE1-208ENST00000600970 SLC30A2Q9BRI3 323 aa13.96□□□□□ -0.17
USE1-208ENST00000600970 WACQ9BTA9 647 aa13.96□□□□□ -0.17
USE1-208ENST00000600970 CCDC28BQ9BUN5 200 aa13.96□□□□□ -0.17
USE1-208ENST00000600970 CDADC1Q9BWV3 514 aa13.96□□□□□ -0.17
USE1-208ENST00000600970 EMC7Q9NPA0 242 aa13.96□□□□□ -0.17
USE1-208ENST00000600970 NKIRAS1Q9NYS0 192 aa13.96□□□□□ -0.17
USE1-208ENST00000600970 RIMS3Q9UJD0 308 aa13.96□□□□□ -0.17
USE1-208ENST00000600970 MED31Q9Y3C7 131 aa13.96□□□□□ -0.17
USE1-208ENST00000600970 POMT1Q9Y6A1 747 aa13.96□□□□□ -0.17
USE1-208ENST00000600970 NOTCH1P46531 2555 aa13.95□□□□□ -0.18
USE1-208ENST00000600970 WNK1Q9H4A3 2382 aa13.95□□□□□ -0.18
USE1-208ENST00000600970 SLC22A31A6NKX4 558 aa13.95□□□□□ -0.18
USE1-208ENST00000600970 H0YL77 283 aa13.95□□□□□ -0.18
USE1-208ENST00000600970 SGCEO43556 437 aa13.95□□□□□ -0.18
USE1-208ENST00000600970 PIP5K1CO60331 668 aa13.95□□□□□ -0.18
USE1-208ENST00000600970 OR5F1O95221 314 aa13.95□□□□□ -0.18
USE1-208ENST00000600970 FSTL3O95633 263 aa13.95□□□□□ -0.18
USE1-208ENST00000600970 RAC2P15153 192 aa13.95□□□□□ -0.18
USE1-208ENST00000600970 TNFRSF1BP20333 461 aa13.95□□□□□ -0.18
USE1-208ENST00000600970 PROK1P58294 105 aa13.95□□□□□ -0.18
USE1-208ENST00000600970 CTXN1P60606 82 aa13.95□□□□□ -0.18
USE1-208ENST00000600970 RPL15P61313 204 aaKnown RBP13.95□□□□□ -0.18
USE1-208ENST00000600970 PIN1Q13526 163 aaPredicted RBP13.95□□□□□ -0.18
USE1-208ENST00000600970 ZNF181Q2M3W8 571 aa13.95□□□□□ -0.18
USE1-208ENST00000600970 FBLN7Q53RD9 439 aa13.95□□□□□ -0.18
USE1-208ENST00000600970 TTMPQ5BVD1 217 aa13.95□□□□□ -0.18
USE1-208ENST00000600970 INTS11Q5TA45 600 aaKnown RBP13.95□□□□□ -0.18
USE1-208ENST00000600970 WDR25Q64LD2 544 aaPredicted RBP13.95□□□□□ -0.18
USE1-208ENST00000600970 C1orf94Q6P1W5 598 aa13.95□□□□□ -0.18
USE1-208ENST00000600970 LYPD2Q6UXB3 125 aa13.95□□□□□ -0.18
USE1-208ENST00000600970 ZNF620Q6ZNG0 422 aa13.95□□□□□ -0.18
USE1-208ENST00000600970 VASH1Q7L8A9 365 aaPredicted RBP13.95□□□□□ -0.18
USE1-208ENST00000600970 NLRC3Q7RTR2 1065 aa13.95□□□□□ -0.18
USE1-208ENST00000600970 COG8Q96MW5 612 aa13.95□□□□□ -0.18
USE1-208ENST00000600970 CGREF1Q99674 301 aa13.95□□□□□ -0.18
USE1-208ENST00000600970 KAT8Q9H7Z6 458 aaKnown RBP13.95□□□□□ -0.18
USE1-208ENST00000600970 CLN8Q9UBY8 286 aa13.95□□□□□ -0.18
USE1-208ENST00000600970 SH3GLB1Q9Y371 365 aa13.95□□□□□ -0.18
USE1-208ENST00000600970 IGHV3-64DA0A0J9YX35 117 aa13.94□□□□□ -0.18
USE1-208ENST00000600970 TNFRSF13BO14836 293 aaPredicted RBP13.94□□□□□ -0.18
USE1-208ENST00000600970 SHOX2O60902 331 aaPredicted RBP13.94□□□□□ -0.18
USE1-208ENST00000600970 SRP9P49458 86 aaKnown RBP13.94□□□□□ -0.18
USE1-208ENST00000600970 SCRN3Q0VDG4 424 aa13.94□□□□□ -0.18
USE1-208ENST00000600970 OR2T2Q6IF00 324 aa13.94□□□□□ -0.18
USE1-208ENST00000600970 ZNF841Q6ZN19 808 aa13.94□□□□□ -0.18
USE1-208ENST00000600970 CCDC80Q76M96 950 aa13.94□□□□□ -0.18
USE1-208ENST00000600970 MOGAT3Q86VF5 341 aa13.94□□□□□ -0.18
USE1-208ENST00000600970 LRRC75AQ8NAA5 344 aa13.94□□□□□ -0.18
USE1-208ENST00000600970 OR8G5Q8NG78 346 aa13.94□□□□□ -0.18
USE1-208ENST00000600970 OR13G1Q8NGZ3 307 aa13.94□□□□□ -0.18
USE1-208ENST00000600970 OR10A6Q8NH74 314 aa13.94□□□□□ -0.18
USE1-208ENST00000600970 SSMEM1Q8WWF3 244 aa13.94□□□□□ -0.18
USE1-208ENST00000600970 SLC7A6Q92536 515 aa13.94□□□□□ -0.18
USE1-208ENST00000600970 DYRK2Q92630 601 aa13.94□□□□□ -0.18
USE1-208ENST00000600970 PCGF1Q9BSM1 259 aa13.94□□□□□ -0.18
USE1-208ENST00000600970 PARD6BQ9BYG5 372 aa13.94□□□□□ -0.18
USE1-208ENST00000600970 POLR2J2Q9GZM3 115 aaKnown RBP13.94□□□□□ -0.18
USE1-208ENST00000600970 POLR2J3Q9H1A7 115 aaKnown RBP13.94□□□□□ -0.18
USE1-208ENST00000600970 ASH2LQ9UBL3 628 aa13.94□□□□□ -0.18
USE1-208ENST00000600970 A6NIZ1 184 aa13.93□□□□□ -0.18
USE1-208ENST00000600970 C22orf46C9J442 243 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms