RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 PTP4A1Q93096 173 aa7.51□□□□□ -1.21
SSBP4-208ENST00000600628 C1orf159Q96HA4 380 aa7.51□□□□□ -1.21
SSBP4-208ENST00000600628 VRK1Q99986 396 aaPredicted RBP7.51□□□□□ -1.21
SSBP4-208ENST00000600628 TSSK6Q9BXA6 273 aa7.51□□□□□ -1.21
SSBP4-208ENST00000600628 MS4A5Q9H3V2 200 aa7.51□□□□□ -1.21
SSBP4-208ENST00000600628 RNF121Q9H920 327 aa7.51□□□□□ -1.21
SSBP4-208ENST00000600628 CDH20Q9HBT6 801 aa7.51□□□□□ -1.21
SSBP4-208ENST00000600628 CCNB1IP1Q9NPC3 277 aa7.51□□□□□ -1.21
SSBP4-208ENST00000600628 RPRD1BQ9NQG5 326 aaKnown RBP7.51□□□□□ -1.21
SSBP4-208ENST00000600628 ASH2LQ9UBL3 628 aa7.51□□□□□ -1.21
SSBP4-208ENST00000600628 KCNG2Q9UJ96 466 aa7.51□□□□□ -1.21
SSBP4-208ENST00000600628 NDRG4Q9ULP0 352 aaKnown RBP7.51□□□□□ -1.21
SSBP4-208ENST00000600628 DNHD1Q96M86 4753 aa7.5□□□□□ -1.21
SSBP4-208ENST00000600628 C5orf49A4QMS7 147 aa7.5□□□□□ -1.21
SSBP4-208ENST00000600628 E9PQ18 207 aa7.5□□□□□ -1.21
SSBP4-208ENST00000600628 M0R233 179 aa7.5□□□□□ -1.21
SSBP4-208ENST00000600628 LILRA1O75019 489 aa7.5□□□□□ -1.21
SSBP4-208ENST00000600628 SOX14O95416 240 aa7.5□□□□□ -1.21
SSBP4-208ENST00000600628 STAMBPO95630 424 aa7.5□□□□□ -1.21
SSBP4-208ENST00000600628 ADRA2AP08913 450 aa7.5□□□□□ -1.21
SSBP4-208ENST00000600628 FAM157BP0CG42 384 aa7.5□□□□□ -1.21
SSBP4-208ENST00000600628 ANXA8P13928 327 aa7.5□□□□□ -1.21
SSBP4-208ENST00000600628 KITLGP21583 273 aa7.5□□□□□ -1.21
SSBP4-208ENST00000600628 NOS3P29474 1203 aa7.5□□□□□ -1.21
SSBP4-208ENST00000600628 GRK5P34947 590 aa7.5□□□□□ -1.21
SSBP4-208ENST00000600628 NR4A2P43354 598 aa7.5□□□□□ -1.21
SSBP4-208ENST00000600628 GDI2P50395 445 aaKnown RBP7.5□□□□□ -1.21
SSBP4-208ENST00000600628 DAPP51397 102 aa7.5□□□□□ -1.21
SSBP4-208ENST00000600628 KLF3P57682 345 aaPredicted RBP7.5□□□□□ -1.21
SSBP4-208ENST00000600628 TEKQ02763 1124 aa7.5□□□□□ -1.21
SSBP4-208ENST00000600628 CRMP1Q14194 572 aa7.5□□□□□ -1.21
SSBP4-208ENST00000600628 ATP6AP1Q15904 470 aa7.5□□□□□ -1.21
SSBP4-208ENST00000600628 SLC36A3Q495N2 470 aa7.5□□□□□ -1.21
SSBP4-208ENST00000600628 CLEC12AQ5QGZ9 265 aa7.5□□□□□ -1.21
SSBP4-208ENST00000600628 SLC35F1Q5T1Q4 408 aa7.5□□□□□ -1.21
SSBP4-208ENST00000600628 OTPQ5XKR4 325 aa7.5□□□□□ -1.21
SSBP4-208ENST00000600628 ACSM5Q6NUN0 579 aa7.5□□□□□ -1.21
SSBP4-208ENST00000600628 DNM1P34Q6PK57 102 aa7.5□□□□□ -1.21
SSBP4-208ENST00000600628 FBXW12Q6X9E4 464 aa7.5□□□□□ -1.21
SSBP4-208ENST00000600628 PARP8Q8N3A8 854 aa7.5□□□□□ -1.21
SSBP4-208ENST00000600628 OR52L1Q8NGH7 329 aa7.5□□□□□ -1.21
SSBP4-208ENST00000600628 OR52E2Q8NGJ4 325 aa7.5□□□□□ -1.21
SSBP4-208ENST00000600628 OR1F12Q8NHA8 337 aa7.5□□□□□ -1.21
SSBP4-208ENST00000600628 SYNPRQ8TBG9 265 aa7.5□□□□□ -1.21
SSBP4-208ENST00000600628 KLF14Q8TD94 323 aaPredicted RBP7.5□□□□□ -1.21
SSBP4-208ENST00000600628 IPCEF1Q8WWN9 437 aaPredicted RBP7.5□□□□□ -1.21
SSBP4-208ENST00000600628 DNAJC9Q8WXX5 260 aa7.5□□□□□ -1.21
SSBP4-208ENST00000600628 FAM168AQ92567 244 aa7.5□□□□□ -1.21
SSBP4-208ENST00000600628 MAP6Q96JE9 813 aa7.5□□□□□ -1.21
SSBP4-208ENST00000600628 C4orf45Q96LM5 186 aa7.5□□□□□ -1.21
SSBP4-208ENST00000600628 FOXN4Q96NZ1 517 aa7.5□□□□□ -1.21
SSBP4-208ENST00000600628 DCLRE1CQ96SD1 692 aaKnown RBP7.5□□□□□ -1.21
SSBP4-208ENST00000600628 COQ7Q99807 217 aa7.5□□□□□ -1.21
SSBP4-208ENST00000600628 HCAR1Q9BXC0 346 aa7.5□□□□□ -1.21
SSBP4-208ENST00000600628 HDHD2Q9H0R4 259 aa7.5□□□□□ -1.21
SSBP4-208ENST00000600628 RAB1BQ9H0U4 201 aa7.5□□□□□ -1.21
SSBP4-208ENST00000600628 POFUT1Q9H488 388 aa7.5□□□□□ -1.21
SSBP4-208ENST00000600628 YY1AP1Q9H869 796 aa7.5□□□□□ -1.21
SSBP4-208ENST00000600628 SRA1Q9HD15 236 aaKnown RBP7.5□□□□□ -1.21
SSBP4-208ENST00000600628 DDX28Q9NUL7 540 aaKnown RBP7.5□□□□□ -1.21
SSBP4-208ENST00000600628 SLCO1C1Q9NYB5 712 aa7.5□□□□□ -1.21
SSBP4-208ENST00000600628 C17orf100A8MU93 164 aa7.49□□□□□ -1.21
SSBP4-208ENST00000600628 INAFM1C9JVW0 142 aa7.49□□□□□ -1.21
SSBP4-208ENST00000600628 CD5LO43866 347 aa7.49□□□□□ -1.21
SSBP4-208ENST00000600628 DOK2O60496 412 aa7.49□□□□□ -1.21
SSBP4-208ENST00000600628 DEAF1O75398 565 aaPredicted RBP7.49□□□□□ -1.21
SSBP4-208ENST00000600628 RENP00797 406 aa7.49□□□□□ -1.21
SSBP4-208ENST00000600628 HPXP02790 462 aa7.49□□□□□ -1.21
SSBP4-208ENST00000600628 CD55P08174 381 aa7.49□□□□□ -1.21
SSBP4-208ENST00000600628 DBHP09172 617 aa7.49□□□□□ -1.21
SSBP4-208ENST00000600628 OSMP13725 252 aa7.49□□□□□ -1.21
SSBP4-208ENST00000600628 SPI1P17947 270 aa7.49□□□□□ -1.21
SSBP4-208ENST00000600628 PRKACGP22612 351 aa7.49□□□□□ -1.21
SSBP4-208ENST00000600628 SLC2A5P22732 501 aa7.49□□□□□ -1.21
SSBP4-208ENST00000600628 ANOS1P23352 680 aa7.49□□□□□ -1.21
SSBP4-208ENST00000600628 MPV17P39210 176 aa7.49□□□□□ -1.21
SSBP4-208ENST00000600628 ALDH3B1P43353 468 aa7.49□□□□□ -1.21
SSBP4-208ENST00000600628 PDLIM4P50479 330 aa7.49□□□□□ -1.21
SSBP4-208ENST00000600628 ACTR3P61158 418 aa7.49□□□□□ -1.21
SSBP4-208ENST00000600628 PPP1CBP62140 327 aa7.49□□□□□ -1.21
SSBP4-208ENST00000600628 PPP2R2BQ00005 443 aa7.49□□□□□ -1.21
SSBP4-208ENST00000600628 PSG7Q13046 419 aa7.49□□□□□ -1.21
SSBP4-208ENST00000600628 KDM4DQ6B0I6 523 aa7.49□□□□□ -1.21
SSBP4-208ENST00000600628 LYPD4Q6UWN0 246 aa7.49□□□□□ -1.21
SSBP4-208ENST00000600628 CFAP77Q6ZQR2 320 aa7.49□□□□□ -1.21
SSBP4-208ENST00000600628 RHOUQ7L0Q8 258 aa7.49□□□□□ -1.21
SSBP4-208ENST00000600628 JAZF1Q86VZ6 243 aa7.49□□□□□ -1.21
SSBP4-208ENST00000600628 SPATA24Q86W54 205 aa7.49□□□□□ -1.21
SSBP4-208ENST00000600628 CYB561A3Q8NBI2 242 aa7.49□□□□□ -1.21
SSBP4-208ENST00000600628 OR1J1Q8NGS3 322 aa7.49□□□□□ -1.21
SSBP4-208ENST00000600628 SLC25A40Q8TBP6 338 aa7.49□□□□□ -1.21
SSBP4-208ENST00000600628 ST7LQ8TDW4 575 aa7.49□□□□□ -1.21
SSBP4-208ENST00000600628 SLC7A6Q92536 515 aa7.49□□□□□ -1.21
SSBP4-208ENST00000600628 HAVCR1Q96D42 359 aa7.49□□□□□ -1.21
SSBP4-208ENST00000600628 SYT3Q9BQG1 590 aa7.49□□□□□ -1.21
SSBP4-208ENST00000600628 C1QTNF5Q9BXJ0 243 aa7.49□□□□□ -1.21
SSBP4-208ENST00000600628 OR2J1Q9GZK6 312 aa7.49□□□□□ -1.21
SSBP4-208ENST00000600628 GABARAPL1Q9H0R8 117 aa7.49□□□□□ -1.21
SSBP4-208ENST00000600628 FN3KQ9H479 309 aa7.49□□□□□ -1.21
SSBP4-208ENST00000600628 ELOVL3Q9HB03 270 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms