RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 RACGAP1Q9H0H5 632 aa13.34□□□□□ -0.27
IRF3-226ENST00000600453 KLHL21Q9UJP4 597 aa13.34□□□□□ -0.27
IRF3-226ENST00000600453 POLR1DQ9Y2S0 133 aa13.34□□□□□ -0.27
IRF3-226ENST00000600453 GRIP1Q9Y3R0 1128 aa13.34□□□□□ -0.27
IRF3-226ENST00000600453 CLDN25C9JDP6 229 aa13.33□□□□□ -0.28
IRF3-226ENST00000600453 RP2O75695 350 aa13.33□□□□□ -0.28
IRF3-226ENST00000600453 PPP1R3DO95685 299 aa13.33□□□□□ -0.28
IRF3-226ENST00000600453 FAM107AO95990 144 aa13.33□□□□□ -0.28
IRF3-226ENST00000600453 CALB2P22676 271 aa13.33□□□□□ -0.28
IRF3-226ENST00000600453 TNFSF4P23510 183 aa13.33□□□□□ -0.28
IRF3-226ENST00000600453 IL2RGP31785 369 aa13.33□□□□□ -0.28
IRF3-226ENST00000600453 MPV17P39210 176 aa13.33□□□□□ -0.28
IRF3-226ENST00000600453 FXYD6P3P58550 94 aa13.33□□□□□ -0.28
IRF3-226ENST00000600453 GLO1Q04760 184 aa13.33□□□□□ -0.28
IRF3-226ENST00000600453 TSTQ16762 297 aaKnown RBP13.33□□□□□ -0.28
IRF3-226ENST00000600453 CR1LQ2VPA4 569 aa13.33□□□□□ -0.28
IRF3-226ENST00000600453 PTCHD4Q6ZW05 846 aa13.33□□□□□ -0.28
IRF3-226ENST00000600453 USP51Q70EK9 711 aa13.33□□□□□ -0.28
IRF3-226ENST00000600453 PEG10Q86TG7 708 aaKnown RBP13.33□□□□□ -0.28
IRF3-226ENST00000600453 GLCCI1Q86VQ1 547 aa13.33□□□□□ -0.28
IRF3-226ENST00000600453 FITM2Q8N6M3 262 aa13.33□□□□□ -0.28
IRF3-226ENST00000600453 CCDC197Q8NCU1 140 aa13.33□□□□□ -0.28
IRF3-226ENST00000600453 OR1F12Q8NHA8 337 aa13.33□□□□□ -0.28
IRF3-226ENST00000600453 CLDND2Q8NHS1 167 aa13.33□□□□□ -0.28
IRF3-226ENST00000600453 GPA33Q99795 319 aa13.33□□□□□ -0.28
IRF3-226ENST00000600453 SOX7Q9BT81 388 aa13.33□□□□□ -0.28
IRF3-226ENST00000600453 TRIM15Q9C019 465 aa13.33□□□□□ -0.28
IRF3-226ENST00000600453 SRA1Q9HD15 236 aaKnown RBP13.33□□□□□ -0.28
IRF3-226ENST00000600453 ASH2LQ9UBL3 628 aa13.33□□□□□ -0.28
IRF3-226ENST00000600453 B9D1Q9UPM9 204 aa13.33□□□□□ -0.28
IRF3-226ENST00000600453 OR6C6A6NF89 314 aa13.32□□□□□ -0.28
IRF3-226ENST00000600453 RNF212BA8MTL3 300 aa13.32□□□□□ -0.28
IRF3-226ENST00000600453 TNFRSF11BO00300 401 aa13.32□□□□□ -0.28
IRF3-226ENST00000600453 SPRY3O43610 288 aa13.32□□□□□ -0.28
IRF3-226ENST00000600453 TIMM8AO60220 97 aaPredicted RBP13.32□□□□□ -0.28
IRF3-226ENST00000600453 IGHV1-46P01743 117 aa13.32□□□□□ -0.28
IRF3-226ENST00000600453 GSSP48637 474 aa13.32□□□□□ -0.28
IRF3-226ENST00000600453 CCNIQ14094 377 aa13.32□□□□□ -0.28
IRF3-226ENST00000600453 TRIM25Q14258 630 aaKnown RBP13.32□□□□□ -0.28
IRF3-226ENST00000600453 LEG1Q6P5S2 330 aa13.32□□□□□ -0.28
IRF3-226ENST00000600453 RFPL4BQ6ZWI9 263 aa13.32□□□□□ -0.28
IRF3-226ENST00000600453 DHFR2Q86XF0 187 aa13.32□□□□□ -0.28
IRF3-226ENST00000600453 TEX29Q8N6K0 151 aa13.32□□□□□ -0.28
IRF3-226ENST00000600453 OR52L1Q8NGH7 329 aa13.32□□□□□ -0.28
IRF3-226ENST00000600453 RAB39BQ96DA2 213 aa13.32□□□□□ -0.28
IRF3-226ENST00000600453 CDADC1Q9BWV3 514 aa13.32□□□□□ -0.28
IRF3-226ENST00000600453 HDHD2Q9H0R4 259 aa13.32□□□□□ -0.28
IRF3-226ENST00000600453 MAGIXQ9H6Y5 334 aa13.32□□□□□ -0.28
IRF3-226ENST00000600453 SURF4O15260 269 aa13.31□□□□□ -0.28
IRF3-226ENST00000600453 CD55P08174 381 aa13.31□□□□□ -0.28
IRF3-226ENST00000600453 GAAP10253 952 aa13.31□□□□□ -0.28
IRF3-226ENST00000600453 RAC2P15153 192 aa13.31□□□□□ -0.28
IRF3-226ENST00000600453 TNFRSF1AP19438 455 aa13.31□□□□□ -0.28
IRF3-226ENST00000600453 KITLGP21583 273 aa13.31□□□□□ -0.28
IRF3-226ENST00000600453 SRP14P37108 136 aaKnown RBP13.31□□□□□ -0.28
IRF3-226ENST00000600453 ECH1Q13011 328 aa13.31□□□□□ -0.28
IRF3-226ENST00000600453 PSG7Q13046 419 aa13.31□□□□□ -0.28
IRF3-226ENST00000600453 FAM98BQ52LJ0 330 aaKnown RBP13.31□□□□□ -0.28
IRF3-226ENST00000600453 CCDC92Q53HC0 331 aaPredicted RBP13.31□□□□□ -0.28
IRF3-226ENST00000600453 ACSM5Q6NUN0 579 aa13.31□□□□□ -0.28
IRF3-226ENST00000600453 CYP2R1Q6VVX0 501 aa13.31□□□□□ -0.28
IRF3-226ENST00000600453 OR6V1Q8N148 313 aa13.31□□□□□ -0.28
IRF3-226ENST00000600453 OR2AJ1Q8NGZ0 328 aa13.31□□□□□ -0.28
IRF3-226ENST00000600453 OR4K13Q8NH42 304 aa13.31□□□□□ -0.28
IRF3-226ENST00000600453 OR51F2Q8NH61 342 aa13.31□□□□□ -0.28
IRF3-226ENST00000600453 CCL17Q92583 94 aa13.31□□□□□ -0.28
IRF3-226ENST00000600453 TMEM186Q96B77 213 aa13.31□□□□□ -0.28
IRF3-226ENST00000600453 HAVCR1Q96D42 359 aa13.31□□□□□ -0.28
IRF3-226ENST00000600453 CMBLQ96DG6 245 aa13.31□□□□□ -0.28
IRF3-226ENST00000600453 SAMD8Q96LT4 415 aa13.31□□□□□ -0.28
IRF3-226ENST00000600453 NMNAT3Q96T66 252 aa13.31□□□□□ -0.28
IRF3-226ENST00000600453 COQ7Q99807 217 aa13.31□□□□□ -0.28
IRF3-226ENST00000600453 NARFLQ9H6Q4 476 aa13.31□□□□□ -0.28
IRF3-226ENST00000600453 TREM2Q9NZC2 230 aa13.31□□□□□ -0.28
IRF3-226ENST00000600453 PRPF19Q9UMS4 504 aaKnown RBP13.31□□□□□ -0.28
IRF3-226ENST00000600453 RER1O15258 196 aa13.3□□□□□ -0.28
IRF3-226ENST00000600453 MPZL1O95297 269 aa13.3□□□□□ -0.28
IRF3-226ENST00000600453 MSMBP08118 114 aa13.3□□□□□ -0.28
IRF3-226ENST00000600453 HIST1H1CP16403 213 aaKnown RBP13.3□□□□□ -0.28
IRF3-226ENST00000600453 HOXB6P17509 224 aaKnown RBP13.3□□□□□ -0.28
IRF3-226ENST00000600453 MAGEA2P43356 314 aa13.3□□□□□ -0.28
IRF3-226ENST00000600453 LMO4P61968 165 aa13.3□□□□□ -0.28
IRF3-226ENST00000600453 HIST1H3AP68431 136 aa13.3□□□□□ -0.28
IRF3-226ENST00000600453 MVKQ03426 396 aa13.3□□□□□ -0.28
IRF3-226ENST00000600453 COX10Q12887 443 aa13.3□□□□□ -0.28
IRF3-226ENST00000600453 SCGB2A2Q13296 93 aa13.3□□□□□ -0.28
IRF3-226ENST00000600453 CDK5R2Q13319 367 aa13.3□□□□□ -0.28
IRF3-226ENST00000600453 GK3PQ14409 553 aa13.3□□□□□ -0.28
IRF3-226ENST00000600453 HIST2H3PS2Q5TEC6 136 aa13.3□□□□□ -0.28
IRF3-226ENST00000600453 LIPNQ5VXI9 398 aa13.3□□□□□ -0.28
IRF3-226ENST00000600453 LCN8Q6JVE9 175 aa13.3□□□□□ -0.28
IRF3-226ENST00000600453 SLC27A4Q6P1M0 643 aa13.3□□□□□ -0.28
IRF3-226ENST00000600453 PGBD2Q6P3X8 592 aa13.3□□□□□ -0.28
IRF3-226ENST00000600453 HIST2H3AQ71DI3 136 aa13.3□□□□□ -0.28
IRF3-226ENST00000600453 ZBTB46Q86UZ6 589 aa13.3□□□□□ -0.28
IRF3-226ENST00000600453 APOBEC3DQ96AK3 386 aaPredicted RBP13.3□□□□□ -0.28
IRF3-226ENST00000600453 C1orf21Q9H246 121 aa13.3□□□□□ -0.28
IRF3-226ENST00000600453 RPRD1BQ9NQG5 326 aaKnown RBP13.3□□□□□ -0.28
IRF3-226ENST00000600453 IL20Q9NYY1 176 aa13.3□□□□□ -0.28
IRF3-226ENST00000600453 KCNG2Q9UJ96 466 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms