RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 SRSF2Q01130 221 aaKnown RBP11.75□□□□□ -0.53
SCAF1-203ENST00000598359 DBPQ10586 325 aaPredicted RBP11.75□□□□□ -0.53
SCAF1-203ENST00000598359 HNRNPA0Q13151 305 aaKnown RBP11.75□□□□□ -0.53
SCAF1-203ENST00000598359 FAM205BPQ63HN1 556 aa11.75□□□□□ -0.53
SCAF1-203ENST00000598359 FOXL2NBQ6ZUU3 175 aa11.75□□□□□ -0.53
SCAF1-203ENST00000598359 RFPL4BQ6ZWI9 263 aa11.75□□□□□ -0.53
SCAF1-203ENST00000598359 USP51Q70EK9 711 aa11.75□□□□□ -0.53
SCAF1-203ENST00000598359 FAM122BQ7Z309 247 aa11.75□□□□□ -0.53
SCAF1-203ENST00000598359 OR5K1Q8NHB7 308 aa11.75□□□□□ -0.53
SCAF1-203ENST00000598359 RDH5Q92781 318 aa11.75□□□□□ -0.53
SCAF1-203ENST00000598359 CNBD2Q96M20 576 aa11.75□□□□□ -0.53
SCAF1-203ENST00000598359 GPA33Q99795 319 aa11.75□□□□□ -0.53
SCAF1-203ENST00000598359 OSBPL10Q9BXB5 764 aa11.75□□□□□ -0.53
SCAF1-203ENST00000598359 ANKRD19PQ9H560 264 aa11.75□□□□□ -0.53
SCAF1-203ENST00000598359 RERGLQ9H628 205 aa11.75□□□□□ -0.53
SCAF1-203ENST00000598359 IL1RAPQ9NPH3 570 aa11.75□□□□□ -0.53
SCAF1-203ENST00000598359 HINT3Q9NQE9 182 aaKnown RBP11.75□□□□□ -0.53
SCAF1-203ENST00000598359 POLE4Q9NR33 117 aa11.75□□□□□ -0.53
SCAF1-203ENST00000598359 ZNF275Q9NSD4 429 aaPredicted RBP11.75□□□□□ -0.53
SCAF1-203ENST00000598359 TMEM160Q9NX00 188 aa11.75□□□□□ -0.53
SCAF1-203ENST00000598359 TMEM5Q9Y2B1 443 aa11.75□□□□□ -0.53
SCAF1-203ENST00000598359 FAM32AQ9Y421 112 aaKnown RBP11.75□□□□□ -0.53
SCAF1-203ENST00000598359 A0A1W2PRQ8 180 aa11.74□□□□□ -0.53
SCAF1-203ENST00000598359 DPPA5A6NC42 116 aa11.74□□□□□ -0.53
SCAF1-203ENST00000598359 C17orf100A8MU93 164 aa11.74□□□□□ -0.53
SCAF1-203ENST00000598359 PTP4A3O75365 173 aa11.74□□□□□ -0.53
SCAF1-203ENST00000598359 MPZL1O95297 269 aa11.74□□□□□ -0.53
SCAF1-203ENST00000598359 NGFP01138 241 aa11.74□□□□□ -0.53
SCAF1-203ENST00000598359 IFNA2P01563 188 aa11.74□□□□□ -0.53
SCAF1-203ENST00000598359 ALPLP05186 524 aa11.74□□□□□ -0.53
SCAF1-203ENST00000598359 CTLA4P16410 223 aa11.74□□□□□ -0.53
SCAF1-203ENST00000598359 RHCEP18577 417 aa11.74□□□□□ -0.53
SCAF1-203ENST00000598359 MSR1P21757 451 aa11.74□□□□□ -0.53
SCAF1-203ENST00000598359 GPR6P46095 362 aaPredicted RBP11.74□□□□□ -0.53
SCAF1-203ENST00000598359 FXYD6P3P58550 94 aa11.74□□□□□ -0.53
SCAF1-203ENST00000598359 SELENOVP59797 346 aa11.74□□□□□ -0.53
SCAF1-203ENST00000598359 ADARB1P78563 741 aaKnown RBP11.74□□□□□ -0.53
SCAF1-203ENST00000598359 KRR1Q13601 381 aaKnown RBP11.74□□□□□ -0.53
SCAF1-203ENST00000598359 APOFQ13790 326 aa11.74□□□□□ -0.53
SCAF1-203ENST00000598359 DGCR6Q14129 220 aa11.74□□□□□ -0.53
SCAF1-203ENST00000598359 TSTQ16762 297 aaKnown RBP11.74□□□□□ -0.53
SCAF1-203ENST00000598359 ANKDD1AQ495B1 522 aa11.74□□□□□ -0.53
SCAF1-203ENST00000598359 ZDHHC21Q8IVQ6 265 aa11.74□□□□□ -0.53
SCAF1-203ENST00000598359 SLC25A40Q8TBP6 338 aa11.74□□□□□ -0.53
SCAF1-203ENST00000598359 IPCEF1Q8WWN9 437 aaPredicted RBP11.74□□□□□ -0.53
SCAF1-203ENST00000598359 BCL2L14Q9BZR8 327 aa11.74□□□□□ -0.53
SCAF1-203ENST00000598359 OR2J1Q9GZK6 312 aa11.74□□□□□ -0.53
SCAF1-203ENST00000598359 SIGLEC7Q9Y286 467 aa11.74□□□□□ -0.53
SCAF1-203ENST00000598359 TIMM10BQ9Y5J6 103 aa11.74□□□□□ -0.53
SCAF1-203ENST00000598359 PRSS37A4D1T9 235 aa11.73□□□□□ -0.53
SCAF1-203ENST00000598359 UNC119BA6NIH7 251 aa11.73□□□□□ -0.53
SCAF1-203ENST00000598359 XKRYO14609 159 aa11.73□□□□□ -0.53
SCAF1-203ENST00000598359 PPIHO43447 177 aaKnown RBP11.73□□□□□ -0.53
SCAF1-203ENST00000598359 RP2O75695 350 aa11.73□□□□□ -0.53
SCAF1-203ENST00000598359 NDUFB2O95178 105 aa11.73□□□□□ -0.53
SCAF1-203ENST00000598359 GPANK1O95872 356 aa11.73□□□□□ -0.53
SCAF1-203ENST00000598359 ACHEP22303 614 aa11.73□□□□□ -0.53
SCAF1-203ENST00000598359 RBMXP38159 391 aaKnown RBP11.73□□□□□ -0.53
SCAF1-203ENST00000598359 CAPGP40121 348 aa11.73□□□□□ -0.53
SCAF1-203ENST00000598359 GUCA1AP43080 201 aaPredicted RBP11.73□□□□□ -0.53
SCAF1-203ENST00000598359 SPIBQ01892 262 aa11.73□□□□□ -0.53
SCAF1-203ENST00000598359 CR1LQ2VPA4 569 aa11.73□□□□□ -0.53
SCAF1-203ENST00000598359 AVPI1Q5T686 147 aa11.73□□□□□ -0.53
SCAF1-203ENST00000598359 PTCHD4Q6ZW05 846 aa11.73□□□□□ -0.53
SCAF1-203ENST00000598359 ZDHHC13Q8IUH4 622 aa11.73□□□□□ -0.53
SCAF1-203ENST00000598359 DHRSXQ8N5I4 330 aa11.73□□□□□ -0.53
SCAF1-203ENST00000598359 CLDND2Q8NHS1 167 aa11.73□□□□□ -0.53
SCAF1-203ENST00000598359 ABHD4Q8TB40 342 aa11.73□□□□□ -0.53
SCAF1-203ENST00000598359 FNDC8Q8TC99 324 aa11.73□□□□□ -0.53
SCAF1-203ENST00000598359 SNX33Q8WV41 574 aa11.73□□□□□ -0.53
SCAF1-203ENST00000598359 NRBF2Q96F24 287 aa11.73□□□□□ -0.53
SCAF1-203ENST00000598359 MARS2Q96GW9 593 aaKnown RBP11.73□□□□□ -0.53
SCAF1-203ENST00000598359 DHRS1Q96LJ7 313 aa11.73□□□□□ -0.53
SCAF1-203ENST00000598359 FUZQ9BT04 418 aa11.73□□□□□ -0.53
SCAF1-203ENST00000598359 SYT4Q9H2B2 425 aa11.73□□□□□ -0.53
SCAF1-203ENST00000598359 POFUT1Q9H488 388 aa11.73□□□□□ -0.53
SCAF1-203ENST00000598359 LPAR2Q9HBW0 351 aa11.73□□□□□ -0.53
SCAF1-203ENST00000598359 SLCO1C1Q9NYB5 712 aa11.73□□□□□ -0.53
SCAF1-203ENST00000598359 TREM2Q9NZC2 230 aa11.73□□□□□ -0.53
SCAF1-203ENST00000598359 EIF3KQ9UBQ5 218 aaKnown RBP11.73□□□□□ -0.53
SCAF1-203ENST00000598359 LPAR3Q9UBY5 353 aa11.73□□□□□ -0.53
SCAF1-203ENST00000598359 IER3IP1Q9Y5U9 82 aa11.73□□□□□ -0.53
SCAF1-203ENST00000598359 CACNG2Q9Y698 323 aa11.73□□□□□ -0.53
SCAF1-203ENST00000598359 C12orf71A8MTZ7 269 aa11.72□□□□□ -0.53
SCAF1-203ENST00000598359 G3V2T6 193 aa11.72□□□□□ -0.53
SCAF1-203ENST00000598359 PHF1O43189 567 aaPredicted RBP11.72□□□□□ -0.53
SCAF1-203ENST00000598359 TPD52L2O43399 206 aaKnown RBP11.72□□□□□ -0.53
SCAF1-203ENST00000598359 SPRY3O43610 288 aa11.72□□□□□ -0.53
SCAF1-203ENST00000598359 SLC16A7O60669 478 aa11.72□□□□□ -0.53
SCAF1-203ENST00000598359 IGHV3-13P01766 116 aa11.72□□□□□ -0.53
SCAF1-203ENST00000598359 FABP3P05413 133 aa11.72□□□□□ -0.53
SCAF1-203ENST00000598359 SRD5A1P18405 259 aa11.72□□□□□ -0.53
SCAF1-203ENST00000598359 CDH15P55291 814 aa11.72□□□□□ -0.53
SCAF1-203ENST00000598359 PCBD1P61457 104 aa11.72□□□□□ -0.53
SCAF1-203ENST00000598359 PPP1CBP62140 327 aa11.72□□□□□ -0.53
SCAF1-203ENST00000598359 GK3PQ14409 553 aa11.72□□□□□ -0.53
SCAF1-203ENST00000598359 ZNF718Q3SXZ3 478 aa11.72□□□□□ -0.53
SCAF1-203ENST00000598359 KCTD21Q4G0X4 260 aa11.72□□□□□ -0.53
SCAF1-203ENST00000598359 OR2T5Q6IEZ7 315 aa11.72□□□□□ -0.53
SCAF1-203ENST00000598359 SHQ1Q6PI26 577 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms