RNA–Protein interactions for RNA: ENST00000597995.1

TRIM28-212, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-212ENST00000597995 OR2J1Q9GZK6 312 aa10.57□□□□□ -0.72
TRIM28-212ENST00000597995 NSRP1Q9H0G5 558 aaKnown RBP10.57□□□□□ -0.72
TRIM28-212ENST00000597995 ANKRD19PQ9H560 264 aa10.57□□□□□ -0.72
TRIM28-212ENST00000597995 GORASP2Q9H8Y8 452 aa10.57□□□□□ -0.72
TRIM28-212ENST00000597995 PLEK2Q9NYT0 353 aa10.57□□□□□ -0.72
TRIM28-212ENST00000597995 UBAP1Q9NZ09 502 aa10.57□□□□□ -0.72
TRIM28-212ENST00000597995 PURGQ9UJV8 347 aaKnown RBP10.57□□□□□ -0.72
TRIM28-212ENST00000597995 RPS6KA6Q9UK32 745 aa10.57□□□□□ -0.72
TRIM28-212ENST00000597995 SIGLEC7Q9Y286 467 aa10.57□□□□□ -0.72
TRIM28-212ENST00000597995 TANC2Q9HCD6 1990 aa10.56□□□□□ -0.72
TRIM28-212ENST00000597995 POM121CA8CG34 1229 aa10.56□□□□□ -0.72
TRIM28-212ENST00000597995 IGHV2-70P01814 119 aa10.56□□□□□ -0.72
TRIM28-212ENST00000597995 CD14P08571 375 aa10.56□□□□□ -0.72
TRIM28-212ENST00000597995 HSD17B1P14061 328 aa10.56□□□□□ -0.72
TRIM28-212ENST00000597995 RHCEP18577 417 aa10.56□□□□□ -0.72
TRIM28-212ENST00000597995 LAP3P28838 519 aa10.56□□□□□ -0.72
TRIM28-212ENST00000597995 PPP1CBP62140 327 aa10.56□□□□□ -0.72
TRIM28-212ENST00000597995 ENDOGQ14249 297 aaKnown RBP10.56□□□□□ -0.72
TRIM28-212ENST00000597995 ANKDD1AQ495B1 522 aa10.56□□□□□ -0.72
TRIM28-212ENST00000597995 TMEM155Q4W5P6 130 aa10.56□□□□□ -0.72
TRIM28-212ENST00000597995 MESTQ5EB52 335 aa10.56□□□□□ -0.72
TRIM28-212ENST00000597995 ZER1Q7Z7L7 766 aa10.56□□□□□ -0.72
TRIM28-212ENST00000597995 PGAM4Q8N0Y7 254 aa10.56□□□□□ -0.72
TRIM28-212ENST00000597995 SPICQ8N5J4 248 aa10.56□□□□□ -0.72
TRIM28-212ENST00000597995 AKR7LQ8NHP1 331 aa10.56□□□□□ -0.72
TRIM28-212ENST00000597995 ABHD4Q8TB40 342 aa10.56□□□□□ -0.72
TRIM28-212ENST00000597995 FNDC8Q8TC99 324 aa10.56□□□□□ -0.72
TRIM28-212ENST00000597995 RBP7Q96R05 134 aa10.56□□□□□ -0.72
TRIM28-212ENST00000597995 CDRT15Q96T59 188 aa10.56□□□□□ -0.72
TRIM28-212ENST00000597995 WNT5BQ9H1J7 359 aa10.56□□□□□ -0.72
TRIM28-212ENST00000597995 ELOVL3Q9HB03 270 aa10.56□□□□□ -0.72
TRIM28-212ENST00000597995 PATZ1Q9HBE1 687 aaKnown RBP10.56□□□□□ -0.72
TRIM28-212ENST00000597995 TAGLN3Q9UI15 199 aa10.56□□□□□ -0.72
TRIM28-212ENST00000597995 ARL2BPQ9Y2Y0 163 aa10.56□□□□□ -0.72
TRIM28-212ENST00000597995 AUP1Q9Y679 476 aa10.56□□□□□ -0.72
TRIM28-212ENST00000597995 V9GYQ6 96 aa10.56□□□□□ -0.72
TRIM28-212ENST00000597995 DNAJC9-AS1A6NH13 148 aa10.55□□□□□ -0.72
TRIM28-212ENST00000597995 CST2P09228 141 aa10.55□□□□□ -0.72
TRIM28-212ENST00000597995 SBK2P0C263 348 aa10.55□□□□□ -0.72
TRIM28-212ENST00000597995 ZNF12P17014 697 aa10.55□□□□□ -0.72
TRIM28-212ENST00000597995 TUBG1P23258 451 aa10.55□□□□□ -0.72
TRIM28-212ENST00000597995 SLC6A9P48067 706 aa10.55□□□□□ -0.72
TRIM28-212ENST00000597995 ARHGDIAP52565 204 aa10.55□□□□□ -0.72
TRIM28-212ENST00000597995 PCBD1P61457 104 aa10.55□□□□□ -0.72
TRIM28-212ENST00000597995 TNFAIP6P98066 277 aaPredicted RBP10.55□□□□□ -0.72
TRIM28-212ENST00000597995 ZNF154Q13106 437 aa10.55□□□□□ -0.72
TRIM28-212ENST00000597995 CDK5R2Q13319 367 aa10.55□□□□□ -0.72
TRIM28-212ENST00000597995 ARMCX4Q5H9R4 360 aa10.55□□□□□ -0.72
TRIM28-212ENST00000597995 MTX3Q5HYI7 312 aa10.55□□□□□ -0.72
TRIM28-212ENST00000597995 FAM205BPQ63HN1 556 aa10.55□□□□□ -0.72
TRIM28-212ENST00000597995 ARL9Q6T311 187 aa10.55□□□□□ -0.72
TRIM28-212ENST00000597995 RFPL4BQ6ZWI9 263 aa10.55□□□□□ -0.72
TRIM28-212ENST00000597995 CYP4Z1Q86W10 505 aa10.55□□□□□ -0.72
TRIM28-212ENST00000597995 LRRC28Q86X40 367 aaPredicted RBP10.55□□□□□ -0.72
TRIM28-212ENST00000597995 KLHL36Q8N4N3 616 aa10.55□□□□□ -0.72
TRIM28-212ENST00000597995 ZNF283Q8N7M2 679 aa10.55□□□□□ -0.72
TRIM28-212ENST00000597995 OR52J3Q8NH60 311 aa10.55□□□□□ -0.72
TRIM28-212ENST00000597995 PYURFQ96I23 114 aa10.55□□□□□ -0.72
TRIM28-212ENST00000597995 C4orf45Q96LM5 186 aa10.55□□□□□ -0.72
TRIM28-212ENST00000597995 SAMD8Q96LT4 415 aa10.55□□□□□ -0.72
TRIM28-212ENST00000597995 OR2H1Q9GZK4 316 aa10.55□□□□□ -0.72
TRIM28-212ENST00000597995 MMP26Q9NRE1 261 aa10.55□□□□□ -0.72
TRIM28-212ENST00000597995 TUBG2Q9NRH3 451 aa10.55□□□□□ -0.72
TRIM28-212ENST00000597995 TMEM106BQ9NUM4 274 aa10.55□□□□□ -0.72
TRIM28-212ENST00000597995 ZNF69Q9UC07 566 aa10.55□□□□□ -0.72
TRIM28-212ENST00000597995 IL20RAQ9UHF4 553 aa10.55□□□□□ -0.72
TRIM28-212ENST00000597995 SAMD4AQ9UPU9 718 aaKnown RBP10.55□□□□□ -0.72
TRIM28-212ENST00000597995 TMEM5Q9Y2B1 443 aa10.55□□□□□ -0.72
TRIM28-212ENST00000597995 TIMM10BQ9Y5J6 103 aa10.55□□□□□ -0.72
TRIM28-212ENST00000597995 INSIG2Q9Y5U4 225 aa10.55□□□□□ -0.72
TRIM28-212ENST00000597995 TRRAPQ9Y4A5 3859 aa10.54□□□□□ -0.72
TRIM28-212ENST00000597995 A6NIZ1 184 aa10.54□□□□□ -0.72
TRIM28-212ENST00000597995 A8MXK9 166 aa10.54□□□□□ -0.72
TRIM28-212ENST00000597995 TRAPPC2LH3BP13 241 aa10.54□□□□□ -0.72
TRIM28-212ENST00000597995 CLDN34H7C241 214 aa10.54□□□□□ -0.72
TRIM28-212ENST00000597995 ARPC2O15144 300 aa10.54□□□□□ -0.72
TRIM28-212ENST00000597995 NGFP01138 241 aa10.54□□□□□ -0.72
TRIM28-212ENST00000597995 RNASE1P07998 156 aaKnown RBP10.54□□□□□ -0.72
TRIM28-212ENST00000597995 CTLA4P16410 223 aa10.54□□□□□ -0.72
TRIM28-212ENST00000597995 TNFRSF1AP19438 455 aa10.54□□□□□ -0.72
TRIM28-212ENST00000597995 CPT2P23786 658 aa10.54□□□□□ -0.72
TRIM28-212ENST00000597995 RPL4P36578 427 aaKnown RBP10.54□□□□□ -0.72
TRIM28-212ENST00000597995 GUCA1AP43080 201 aaPredicted RBP10.54□□□□□ -0.72
TRIM28-212ENST00000597995 RAP1BP61224 184 aa10.54□□□□□ -0.72
TRIM28-212ENST00000597995 RAP1AP62834 184 aa10.54□□□□□ -0.72
TRIM28-212ENST00000597995 IL13RA1P78552 427 aa10.54□□□□□ -0.72
TRIM28-212ENST00000597995 BAMBIQ13145 260 aa10.54□□□□□ -0.72
TRIM28-212ENST00000597995 PDLIM3Q53GG5 364 aaPredicted RBP10.54□□□□□ -0.72
TRIM28-212ENST00000597995 SPRNQ5BIV9 151 aa10.54□□□□□ -0.72
TRIM28-212ENST00000597995 FGD3Q5JSP0 725 aa10.54□□□□□ -0.72
TRIM28-212ENST00000597995 KLF17Q5JT82 389 aaPredicted RBP10.54□□□□□ -0.72
TRIM28-212ENST00000597995 OTPQ5XKR4 325 aa10.54□□□□□ -0.72
TRIM28-212ENST00000597995 ZNF771Q7L3S4 317 aaPredicted RBP10.54□□□□□ -0.72
TRIM28-212ENST00000597995 RRM2BQ7LG56 351 aa10.54□□□□□ -0.72
TRIM28-212ENST00000597995 SYT9Q86SS6 491 aa10.54□□□□□ -0.72
TRIM28-212ENST00000597995 RASD2Q96D21 266 aa10.54□□□□□ -0.72
TRIM28-212ENST00000597995 C1orf147Q96MC9 270 aaPredicted RBP10.54□□□□□ -0.72
TRIM28-212ENST00000597995 DCLRE1CQ96SD1 692 aaKnown RBP10.54□□□□□ -0.72
TRIM28-212ENST00000597995 GPX7Q96SL4 187 aaPredicted RBP10.54□□□□□ -0.72
TRIM28-212ENST00000597995 WACQ9BTA9 647 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms