RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 POFUT1Q9H488 388 aa8.41□□□□□ -1.06
TRIM28-210ENST00000597618 TMEM38AQ9H6F2 299 aa8.41□□□□□ -1.06
TRIM28-210ENST00000597618 SLC7A7Q9UM01 511 aa8.41□□□□□ -1.06
TRIM28-210ENST00000597618 ANGPT4Q9Y264 503 aa8.41□□□□□ -1.06
TRIM28-210ENST00000597618 A0A0U1RQK1 487 aa8.4□□□□□ -1.06
TRIM28-210ENST00000597618 TRAPPC13A5PLN9 417 aa8.4□□□□□ -1.06
TRIM28-210ENST00000597618 BTBD17A6NE02 478 aa8.4□□□□□ -1.06
TRIM28-210ENST00000597618 C12orf71A8MTZ7 269 aa8.4□□□□□ -1.06
TRIM28-210ENST00000597618 TSPAN9O75954 239 aa8.4□□□□□ -1.06
TRIM28-210ENST00000597618 THY1P04216 161 aa8.4□□□□□ -1.06
TRIM28-210ENST00000597618 MMP9P14780 707 aa8.4□□□□□ -1.06
TRIM28-210ENST00000597618 RAC2P15153 192 aa8.4□□□□□ -1.06
TRIM28-210ENST00000597618 MSR1P21757 451 aa8.4□□□□□ -1.06
TRIM28-210ENST00000597618 FUT4P22083 530 aa8.4□□□□□ -1.06
TRIM28-210ENST00000597618 HTR5AP47898 357 aa8.4□□□□□ -1.06
TRIM28-210ENST00000597618 HERPUD1Q15011 391 aa8.4□□□□□ -1.06
TRIM28-210ENST00000597618 NPTX1Q15818 432 aa8.4□□□□□ -1.06
TRIM28-210ENST00000597618 RUNDC3AQ59EK9 446 aa8.4□□□□□ -1.06
TRIM28-210ENST00000597618 LRIF1Q5T3J3 769 aa8.4□□□□□ -1.06
TRIM28-210ENST00000597618 METTL11BQ5VVY1 283 aa8.4□□□□□ -1.06
TRIM28-210ENST00000597618 SLC25A47Q6Q0C1 308 aa8.4□□□□□ -1.06
TRIM28-210ENST00000597618 Q6ZTK2 550 aa8.4□□□□□ -1.06
TRIM28-210ENST00000597618 FOXL2NBQ6ZUU3 175 aa8.4□□□□□ -1.06
TRIM28-210ENST00000597618 SYT9Q86SS6 491 aa8.4□□□□□ -1.06
TRIM28-210ENST00000597618 MOGAT3Q86VF5 341 aa8.4□□□□□ -1.06
TRIM28-210ENST00000597618 C10orf111Q8N326 155 aa8.4□□□□□ -1.06
TRIM28-210ENST00000597618 GALNT4Q8N4A0 578 aa8.4□□□□□ -1.06
TRIM28-210ENST00000597618 SCCPDHQ8NBX0 429 aa8.4□□□□□ -1.06
TRIM28-210ENST00000597618 OR6T1Q8NGN1 323 aa8.4□□□□□ -1.06
TRIM28-210ENST00000597618 OR13G1Q8NGZ3 307 aa8.4□□□□□ -1.06
TRIM28-210ENST00000597618 HDAC2Q92769 488 aaKnown RBP8.4□□□□□ -1.06
TRIM28-210ENST00000597618 PTP4A1Q93096 173 aa8.4□□□□□ -1.06
TRIM28-210ENST00000597618 MAELQ96JY0 434 aaKnown RBP8.4□□□□□ -1.06
TRIM28-210ENST00000597618 WDFY2Q96P53 400 aa8.4□□□□□ -1.06
TRIM28-210ENST00000597618 TECTBQ96PL2 329 aa8.4□□□□□ -1.06
TRIM28-210ENST00000597618 ALG12Q9BV10 488 aa8.4□□□□□ -1.06
TRIM28-210ENST00000597618 SSU72Q9NP77 194 aaKnown RBP8.4□□□□□ -1.06
TRIM28-210ENST00000597618 NECAP2Q9NVZ3 263 aa8.4□□□□□ -1.06
TRIM28-210ENST00000597618 SLC25A37Q9NYZ2 338 aa8.4□□□□□ -1.06
TRIM28-210ENST00000597618 CORO2BQ9UQ03 480 aa8.4□□□□□ -1.06
TRIM28-210ENST00000597618 ZNF816-ZNF321PA0A0X1KG74 233 aa8.39□□□□□ -1.07
TRIM28-210ENST00000597618 J3QW42 95 aa8.39□□□□□ -1.07
TRIM28-210ENST00000597618 UBDO15205 165 aa8.39□□□□□ -1.07
TRIM28-210ENST00000597618 DOK2O60496 412 aa8.39□□□□□ -1.07
TRIM28-210ENST00000597618 IRF2P14316 349 aa8.39□□□□□ -1.07
TRIM28-210ENST00000597618 TGFBR2P37173 567 aa8.39□□□□□ -1.07
TRIM28-210ENST00000597618 AQP2P41181 271 aa8.39□□□□□ -1.07
TRIM28-210ENST00000597618 ERFP50548 548 aa8.39□□□□□ -1.07
TRIM28-210ENST00000597618 SCRN3Q0VDG4 424 aa8.39□□□□□ -1.07
TRIM28-210ENST00000597618 ENDOGQ14249 297 aaKnown RBP8.39□□□□□ -1.07
TRIM28-210ENST00000597618 ZNF841Q6ZN19 808 aa8.39□□□□□ -1.07
TRIM28-210ENST00000597618 SLC30A8Q8IWU4 369 aa8.39□□□□□ -1.07
TRIM28-210ENST00000597618 MSRB3Q8IXL7 192 aa8.39□□□□□ -1.07
TRIM28-210ENST00000597618 OR5AS1Q8N127 324 aa8.39□□□□□ -1.07
TRIM28-210ENST00000597618 PNLDC1Q8NA58 520 aaKnown RBP8.39□□□□□ -1.07
TRIM28-210ENST00000597618 OR8G5Q8NG78 346 aa8.39□□□□□ -1.07
TRIM28-210ENST00000597618 LHX4Q969G2 390 aa8.39□□□□□ -1.07
TRIM28-210ENST00000597618 ZNF582Q96NG8 517 aaPredicted RBP8.39□□□□□ -1.07
TRIM28-210ENST00000597618 RBP7Q96R05 134 aa8.39□□□□□ -1.07
TRIM28-210ENST00000597618 WACQ9BTA9 647 aa8.39□□□□□ -1.07
TRIM28-210ENST00000597618 TXNIPQ9H3M7 391 aa8.39□□□□□ -1.07
TRIM28-210ENST00000597618 MEPEQ9NQ76 525 aaPredicted RBP8.39□□□□□ -1.07
TRIM28-210ENST00000597618 VPREB3Q9UKI3 123 aa8.39□□□□□ -1.07
TRIM28-210ENST00000597618 STARD10Q9Y365 291 aa8.39□□□□□ -1.07
TRIM28-210ENST00000597618 FAM96BQ9Y3D0 163 aa8.39□□□□□ -1.07
TRIM28-210ENST00000597618 GMEB1Q9Y692 573 aa8.39□□□□□ -1.07
TRIM28-210ENST00000597618 COL7A1Q02388 2944 aa8.39□□□□□ -1.07
TRIM28-210ENST00000597618 TET2Q6N021 2002 aaPredicted RBP8.39□□□□□ -1.07
TRIM28-210ENST00000597618 A0A1W2PPL8 197 aa8.38□□□□□ -1.07
TRIM28-210ENST00000597618 GPR37O15354 613 aa8.38□□□□□ -1.07
TRIM28-210ENST00000597618 XPNPEP2O43895 674 aa8.38□□□□□ -1.07
TRIM28-210ENST00000597618 OR7A10O76100 309 aa8.38□□□□□ -1.07
TRIM28-210ENST00000597618 IGF2P01344 180 aa8.38□□□□□ -1.07
TRIM28-210ENST00000597618 MT-ND1P03886 318 aa8.38□□□□□ -1.07
TRIM28-210ENST00000597618 KITP10721 976 aa8.38□□□□□ -1.07
TRIM28-210ENST00000597618 FUT1P19526 365 aa8.38□□□□□ -1.07
TRIM28-210ENST00000597618 CD247P20963 164 aa8.38□□□□□ -1.07
TRIM28-210ENST00000597618 PSMB10P40306 273 aa8.38□□□□□ -1.07
TRIM28-210ENST00000597618 KCNJ8Q15842 424 aa8.38□□□□□ -1.07
TRIM28-210ENST00000597618 DUSP7Q16829 419 aa8.38□□□□□ -1.07
TRIM28-210ENST00000597618 FAM201AQ5SY85 155 aa8.38□□□□□ -1.07
TRIM28-210ENST00000597618 LYPD2Q6UXB3 125 aa8.38□□□□□ -1.07
TRIM28-210ENST00000597618 RBM45Q8IUH3 476 aaKnown RBP8.38□□□□□ -1.07
TRIM28-210ENST00000597618 CLDN22Q8N7P3 220 aa8.38□□□□□ -1.07
TRIM28-210ENST00000597618 GPR32P1Q8NGA4 272 aa8.38□□□□□ -1.07
TRIM28-210ENST00000597618 OR11L1Q8NGX0 322 aa8.38□□□□□ -1.07
TRIM28-210ENST00000597618 MOSPD2Q8NHP6 518 aa8.38□□□□□ -1.07
TRIM28-210ENST00000597618 SGTBQ96EQ0 304 aa8.38□□□□□ -1.07
TRIM28-210ENST00000597618 SIRPDQ9H106 197 aa8.38□□□□□ -1.07
TRIM28-210ENST00000597618 PCDHAC1Q9H158 963 aa8.38□□□□□ -1.07
TRIM28-210ENST00000597618 RASSF4Q9H2L5 321 aa8.38□□□□□ -1.07
TRIM28-210ENST00000597618 MMADHCQ9H3L0 296 aaPredicted RBP8.38□□□□□ -1.07
TRIM28-210ENST00000597618 POLE4Q9NR33 117 aa8.38□□□□□ -1.07
TRIM28-210ENST00000597618 ERVK-18Q9QC07 812 aa8.38□□□□□ -1.07
TRIM28-210ENST00000597618 CAB39Q9Y376 341 aaPredicted RBP8.38□□□□□ -1.07
TRIM28-210ENST00000597618 DNAH9Q9NYC9 4486 aa8.38□□□□□ -1.07
TRIM28-210ENST00000597618 DOCK11Q5JSL3 2073 aa8.38□□□□□ -1.07
TRIM28-210ENST00000597618 IGHV3-64DA0A0J9YX35 117 aa8.37□□□□□ -1.07
TRIM28-210ENST00000597618 EVPLLA8MZ36 301 aa8.37□□□□□ -1.07
TRIM28-210ENST00000597618 F5H5P2 479 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms