RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 ACHEP22303 614 aa20.21■□□□□ 0.83
SRRM1-222ENST00000596378 CDAP32320 146 aa20.21■□□□□ 0.83
SRRM1-222ENST00000596378 P2RY4P51582 365 aa20.21■□□□□ 0.83
SRRM1-222ENST00000596378 C3orf33Q6P1S2 294 aa20.21■□□□□ 0.83
SRRM1-222ENST00000596378 ZNF627Q7L945 461 aa20.21■□□□□ 0.83
SRRM1-222ENST00000596378 UEVLDQ8IX04 471 aa20.21■□□□□ 0.83
SRRM1-222ENST00000596378 NAT6Q93015 286 aa20.21■□□□□ 0.83
SRRM1-222ENST00000596378 MRPL13Q9BYD1 178 aaKnown RBP20.21■□□□□ 0.83
SRRM1-222ENST00000596378 ZMAT3Q9HA38 289 aaKnown RBP20.21■□□□□ 0.83
SRRM1-222ENST00000596378 NPDC1Q9NQX5 325 aaPredicted RBP20.21■□□□□ 0.83
SRRM1-222ENST00000596378 SCP2D1Q9UJQ7 156 aa20.21■□□□□ 0.83
SRRM1-222ENST00000596378 ELF5Q9UKW6 265 aaPredicted RBP20.21■□□□□ 0.83
SRRM1-222ENST00000596378 COLQQ9Y215 455 aaPredicted RBP20.21■□□□□ 0.83
SRRM1-222ENST00000596378 NPTNQ9Y639 398 aa20.21■□□□□ 0.83
SRRM1-222ENST00000596378 TTLL8A6PVC2 850 aa20.21■□□□□ 0.83
SRRM1-222ENST00000596378 PCOLCEQ15113 449 aa20.21■□□□□ 0.83
SRRM1-222ENST00000596378 CSRP2Q16527 193 aa20.21■□□□□ 0.83
SRRM1-222ENST00000596378 ZNF782Q6ZMW2 699 aaPredicted RBP20.21■□□□□ 0.83
SRRM1-222ENST00000596378 EDAQ92838 391 aa20.21■□□□□ 0.83
SRRM1-222ENST00000596378 WDR89Q96FK6 387 aaPredicted RBP20.21■□□□□ 0.83
SRRM1-222ENST00000596378 RBP7Q96R05 134 aa20.21■□□□□ 0.83
SRRM1-222ENST00000596378 SEC61A2Q9H9S3 476 aa20.21■□□□□ 0.83
SRRM1-222ENST00000596378 FAM206AQ9NX38 181 aa20.21■□□□□ 0.83
SRRM1-222ENST00000596378 EMC3Q9P0I2 261 aa20.21■□□□□ 0.83
SRRM1-222ENST00000596378 KLHL13Q9P2N7 655 aa20.21■□□□□ 0.83
SRRM1-222ENST00000596378 MGAT4CQ9UBM8 478 aa20.21■□□□□ 0.83
SRRM1-222ENST00000596378 ISG15P05161 165 aa20.2■□□□□ 0.82
SRRM1-222ENST00000596378 PRSS3P35030 304 aa20.2■□□□□ 0.82
SRRM1-222ENST00000596378 CLRN1P58418 232 aa20.2■□□□□ 0.82
SRRM1-222ENST00000596378 LGALSLQ3ZCW2 172 aaPredicted RBP20.2■□□□□ 0.82
SRRM1-222ENST00000596378 CFAP77Q6ZQR2 320 aa20.2■□□□□ 0.82
SRRM1-222ENST00000596378 GINS4Q9BRT9 223 aa20.2■□□□□ 0.82
SRRM1-222ENST00000596378 EIF3KQ9UBQ5 218 aaKnown RBP20.2■□□□□ 0.82
SRRM1-222ENST00000596378 CYB5R1Q9UHQ9 305 aa20.2■□□□□ 0.82
SRRM1-222ENST00000596378 CHCHD2Q9Y6H1 151 aaPredicted RBP20.2■□□□□ 0.82
SRRM1-222ENST00000596378 HRGP04196 525 aa20.2■□□□□ 0.82
SRRM1-222ENST00000596378 CD3DP04234 171 aa20.2■□□□□ 0.82
SRRM1-222ENST00000596378 ACSM4P0C7M7 580 aa20.2■□□□□ 0.82
SRRM1-222ENST00000596378 VSIG10L2P0DP72 767 aa20.2■□□□□ 0.82
SRRM1-222ENST00000596378 CCL4P13236 92 aa20.2■□□□□ 0.82
SRRM1-222ENST00000596378 ZNF767PQ75MW2 155 aa20.2■□□□□ 0.82
SRRM1-222ENST00000596378 OR4K17Q8NGC6 315 aa20.2■□□□□ 0.82
SRRM1-222ENST00000596378 ELP5Q8TE02 316 aa20.2■□□□□ 0.82
SRRM1-222ENST00000596378 FGGYQ96C11 551 aa20.2■□□□□ 0.82
SRRM1-222ENST00000596378 FANCFQ9NPI8 374 aa20.2■□□□□ 0.82
SRRM1-222ENST00000596378 TPPPO94811 219 aa20.19■□□□□ 0.82
SRRM1-222ENST00000596378 TTRP02766 147 aa20.19■□□□□ 0.82
SRRM1-222ENST00000596378 CSF1P09603 554 aa20.19■□□□□ 0.82
SRRM1-222ENST00000596378 PER3P56645 1201 aa20.19■□□□□ 0.82
SRRM1-222ENST00000596378 MOGAT2Q3SYC2 334 aa20.19■□□□□ 0.82
SRRM1-222ENST00000596378 ZNF704Q6ZNC4 412 aaPredicted RBP20.19■□□□□ 0.82
SRRM1-222ENST00000596378 OR4D6Q8NGJ1 314 aa20.19■□□□□ 0.82
SRRM1-222ENST00000596378 OR51S1Q8NGJ8 323 aa20.19■□□□□ 0.82
SRRM1-222ENST00000596378 MASP2O00187 686 aa20.19■□□□□ 0.82
SRRM1-222ENST00000596378 TRAF3IP2O43734 574 aaPredicted RBP20.19■□□□□ 0.82
SRRM1-222ENST00000596378 PGA4P0DJD7 388 aa20.19■□□□□ 0.82
SRRM1-222ENST00000596378 PGA3P0DJD8 388 aa20.19■□□□□ 0.82
SRRM1-222ENST00000596378 FGF5P12034 268 aa20.19■□□□□ 0.82
SRRM1-222ENST00000596378 LAP3P28838 519 aa20.19■□□□□ 0.82
SRRM1-222ENST00000596378 TMEM176BQ3YBM2 270 aaPredicted RBP20.19■□□□□ 0.82
SRRM1-222ENST00000596378 CDH24Q86UP0 819 aa20.19■□□□□ 0.82
SRRM1-222ENST00000596378 UBALD2Q8IYN6 164 aa20.19■□□□□ 0.82
SRRM1-222ENST00000596378 MEIOBQ8N635 442 aa20.19■□□□□ 0.82
SRRM1-222ENST00000596378 OR6M1Q8NGM8 313 aa20.19■□□□□ 0.82
SRRM1-222ENST00000596378 UTP23Q9BRU9 249 aaKnown RBP20.19■□□□□ 0.82
SRRM1-222ENST00000596378 UMODP07911 640 aa20.18■□□□□ 0.82
SRRM1-222ENST00000596378 FAUP35544 74 aaKnown RBP20.18■□□□□ 0.82
SRRM1-222ENST00000596378 ZNF81P51508 661 aa20.18■□□□□ 0.82
SRRM1-222ENST00000596378 MMP16P51512 607 aa20.18■□□□□ 0.82
SRRM1-222ENST00000596378 TMEM244Q5VVB8 128 aa20.18■□□□□ 0.82
SRRM1-222ENST00000596378 ZNF626Q68DY1 528 aa20.18■□□□□ 0.82
SRRM1-222ENST00000596378 DEGS2Q6QHC5 323 aa20.18■□□□□ 0.82
SRRM1-222ENST00000596378 NOXO1Q8NFA2 376 aa20.18■□□□□ 0.82
SRRM1-222ENST00000596378 MR1Q95460 341 aa20.18■□□□□ 0.82
SRRM1-222ENST00000596378 HEXA-AS1Q9H8Q6 139 aa20.18■□□□□ 0.82
SRRM1-222ENST00000596378 SLC17A5Q9NRA2 495 aa20.18■□□□□ 0.82
SRRM1-222ENST00000596378 LHFPL6Q9Y693 200 aa20.18■□□□□ 0.82
SRRM1-222ENST00000596378 D6RAR5 112 aa20.18■□□□□ 0.82
SRRM1-222ENST00000596378 CREBL2O60519 120 aaPredicted RBP20.18■□□□□ 0.82
SRRM1-222ENST00000596378 RLN1P04808 185 aa20.18■□□□□ 0.82
SRRM1-222ENST00000596378 UBCP0CG48 685 aaKnown RBP20.18■□□□□ 0.82
SRRM1-222ENST00000596378 ANOS1P23352 680 aa20.18■□□□□ 0.82
SRRM1-222ENST00000596378 RBMS2Q15434 407 aaKnown RBP20.18■□□□□ 0.82
SRRM1-222ENST00000596378 ZBTB37Q5TC79 503 aa20.18■□□□□ 0.82
SRRM1-222ENST00000596378 ADGRE4PQ86SQ3 457 aa20.18■□□□□ 0.82
SRRM1-222ENST00000596378 CITED4Q96RK1 184 aa20.18■□□□□ 0.82
SRRM1-222ENST00000596378 PBOV1Q9GZY1 135 aa20.18■□□□□ 0.82
SRRM1-222ENST00000596378 PTRH2Q9Y3E5 179 aaKnown RBP20.18■□□□□ 0.82
SRRM1-222ENST00000596378 TPOP07202 933 aa20.17■□□□□ 0.82
SRRM1-222ENST00000596378 GNALP38405 381 aa20.17■□□□□ 0.82
SRRM1-222ENST00000596378 UBE2MP61081 183 aaKnown RBP20.17■□□□□ 0.82
SRRM1-222ENST00000596378 CLEC1AQ8NC01 280 aa20.17■□□□□ 0.82
SRRM1-222ENST00000596378 GPX8Q8TED1 209 aa20.17■□□□□ 0.82
SRRM1-222ENST00000596378 NKD1Q969G9 470 aa20.17■□□□□ 0.82
SRRM1-222ENST00000596378 SEH1LQ96EE3 360 aa20.17■□□□□ 0.82
SRRM1-222ENST00000596378 ADAT3Q96EY9 351 aaPredicted RBP20.17■□□□□ 0.82
SRRM1-222ENST00000596378 C1orf198Q9H425 327 aa20.17■□□□□ 0.82
SRRM1-222ENST00000596378 PTTG3PQ9NZH4 202 aa20.17■□□□□ 0.82
SRRM1-222ENST00000596378 PIPOXQ9P0Z9 390 aa20.17■□□□□ 0.82
SRRM1-222ENST00000596378 GPN3Q9UHW5 284 aaPredicted RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms