RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 LIME1Q9H400 295 aa16.73■□□□□ 0.27
PNKP-207ENST00000596014 WDR76Q9H967 626 aa16.73■□□□□ 0.27
PNKP-207ENST00000596014 UBTD1Q9HAC8 227 aa16.73■□□□□ 0.27
PNKP-207ENST00000596014 CISD1Q9NZ45 108 aaKnown RBP16.73■□□□□ 0.27
PNKP-207ENST00000596014 CYB5R1Q9UHQ9 305 aa16.73■□□□□ 0.27
PNKP-207ENST00000596014 POU2F3Q9UKI9 436 aa16.73■□□□□ 0.27
PNKP-207ENST00000596014 NAV2Q8IVL1 2488 aa16.72■□□□□ 0.27
PNKP-207ENST00000596014 HS3ST1O14792 307 aa16.72■□□□□ 0.27
PNKP-207ENST00000596014 CCL2P13500 99 aa16.72■□□□□ 0.27
PNKP-207ENST00000596014 SLC2A5P22732 501 aa16.72■□□□□ 0.27
PNKP-207ENST00000596014 STOMP27105 288 aa16.72■□□□□ 0.27
PNKP-207ENST00000596014 ISL1P61371 349 aa16.72■□□□□ 0.27
PNKP-207ENST00000596014 ADAM8P78325 824 aa16.72■□□□□ 0.27
PNKP-207ENST00000596014 IL5RAQ01344 420 aa16.72■□□□□ 0.27
PNKP-207ENST00000596014 CORO6Q6QEF8 472 aa16.72■□□□□ 0.27
PNKP-207ENST00000596014 LINC00346Q8IVM7 164 aa16.72■□□□□ 0.27
PNKP-207ENST00000596014 GJC3Q8NFK1 279 aa16.72■□□□□ 0.27
PNKP-207ENST00000596014 TMEM163Q8TC26 289 aa16.72■□□□□ 0.27
PNKP-207ENST00000596014 DGCR14Q96DF8 476 aaKnown RBP16.72■□□□□ 0.27
PNKP-207ENST00000596014 KCNG2Q9UJ96 466 aa16.72■□□□□ 0.27
PNKP-207ENST00000596014 BLOC1S6Q9UL45 172 aa16.72■□□□□ 0.27
PNKP-207ENST00000596014 GMPPBQ9Y5P6 360 aa16.72■□□□□ 0.27
PNKP-207ENST00000596014 ATP23Q9Y6H3 246 aa16.72■□□□□ 0.27
PNKP-207ENST00000596014 COMMD3-BMI1R4GMX3 469 aa16.72■□□□□ 0.27
PNKP-207ENST00000596014 HSPE1-MOB4S4R3N1 261 aa16.72■□□□□ 0.27
PNKP-207ENST00000596014 CCDC160A6NGH7 325 aa16.72■□□□□ 0.27
PNKP-207ENST00000596014 E7EQL1 145 aa16.72■□□□□ 0.27
PNKP-207ENST00000596014 SLC1A7O00341 560 aa16.72■□□□□ 0.27
PNKP-207ENST00000596014 RER1O15258 196 aa16.72■□□□□ 0.27
PNKP-207ENST00000596014 SGCEO43556 437 aa16.72■□□□□ 0.27
PNKP-207ENST00000596014 CRHBPP24387 322 aa16.72■□□□□ 0.27
PNKP-207ENST00000596014 CDH11P55287 796 aa16.72■□□□□ 0.27
PNKP-207ENST00000596014 CDC42P60953 191 aa16.72■□□□□ 0.27
PNKP-207ENST00000596014 HIST1H3AP68431 136 aa16.72■□□□□ 0.27
PNKP-207ENST00000596014 HGFACQ04756 655 aa16.72■□□□□ 0.27
PNKP-207ENST00000596014 C6orf141Q5SZD1 244 aa16.72■□□□□ 0.27
PNKP-207ENST00000596014 HIST2H3PS2Q5TEC6 136 aa16.72■□□□□ 0.27
PNKP-207ENST00000596014 LAIR2Q6ISS4 152 aa16.72■□□□□ 0.27
PNKP-207ENST00000596014 SLC18B1Q6NT16 456 aa16.72■□□□□ 0.27
PNKP-207ENST00000596014 B3GLCTQ6Y288 498 aa16.72■□□□□ 0.27
PNKP-207ENST00000596014 HIST2H3AQ71DI3 136 aa16.72■□□□□ 0.27
PNKP-207ENST00000596014 APOL4Q9BPW4 351 aa16.72■□□□□ 0.27
PNKP-207ENST00000596014 CEPT1Q9Y6K0 416 aa16.72■□□□□ 0.27
PNKP-207ENST00000596014 LOC100509620A0A075B734 347 aa16.71■□□□□ 0.27
PNKP-207ENST00000596014 CYSRT1A8MQ03 144 aa16.71■□□□□ 0.27
PNKP-207ENST00000596014 GSTT1P30711 240 aa16.71■□□□□ 0.27
PNKP-207ENST00000596014 APLNRP35414 380 aa16.71■□□□□ 0.27
PNKP-207ENST00000596014 RPS27P42677 84 aaKnown RBP16.71■□□□□ 0.27
PNKP-207ENST00000596014 TBC1D28Q2M2D7 210 aa16.71■□□□□ 0.27
PNKP-207ENST00000596014 CCDC92Q53HC0 331 aaPredicted RBP16.71■□□□□ 0.27
PNKP-207ENST00000596014 SLC35D3Q5M8T2 416 aa16.71■□□□□ 0.27
PNKP-207ENST00000596014 AADACL4Q5VUY2 407 aa16.71■□□□□ 0.27
PNKP-207ENST00000596014 VASH1Q7L8A9 365 aaPredicted RBP16.71■□□□□ 0.27
PNKP-207ENST00000596014 BCDIN3DQ7Z5W3 292 aaKnown RBP16.71■□□□□ 0.27
PNKP-207ENST00000596014 GPR141Q7Z602 305 aa16.71■□□□□ 0.27
PNKP-207ENST00000596014 PAQR4Q8N4S7 273 aaPredicted RBP16.71■□□□□ 0.27
PNKP-207ENST00000596014 ZNF611Q8N823 705 aa16.71■□□□□ 0.27
PNKP-207ENST00000596014 OR4F15Q8NGB8 312 aa16.71■□□□□ 0.27
PNKP-207ENST00000596014 OR8J1Q8NGP2 316 aa16.71■□□□□ 0.27
PNKP-207ENST00000596014 OR1J2Q8NGS2 313 aa16.71■□□□□ 0.27
PNKP-207ENST00000596014 OR2AJ1Q8NGZ0 328 aa16.71■□□□□ 0.27
PNKP-207ENST00000596014 FBXW5Q969U6 566 aa16.71■□□□□ 0.27
PNKP-207ENST00000596014 ZMYND19Q96E35 227 aaPredicted RBP16.71■□□□□ 0.27
PNKP-207ENST00000596014 POM121L2Q96KW2 1035 aa16.71■□□□□ 0.27
PNKP-207ENST00000596014 TEAD3Q99594 435 aa16.71■□□□□ 0.27
PNKP-207ENST00000596014 MARCH7Q9H992 704 aa16.71■□□□□ 0.27
PNKP-207ENST00000596014 PLEK2Q9NYT0 353 aa16.71■□□□□ 0.27
PNKP-207ENST00000596014 NDRG4Q9ULP0 352 aaKnown RBP16.71■□□□□ 0.27
PNKP-207ENST00000596014 ZNF593O00488 134 aaPredicted RBP16.7■□□□□ 0.26
PNKP-207ENST00000596014 DOK2O60496 412 aa16.7■□□□□ 0.26
PNKP-207ENST00000596014 EEF1B2P24534 225 aaKnown RBP16.7■□□□□ 0.26
PNKP-207ENST00000596014 ENTPD1P49961 510 aa16.7■□□□□ 0.26
PNKP-207ENST00000596014 RPS7P62081 194 aaKnown RBP16.7■□□□□ 0.26
PNKP-207ENST00000596014 PCK2Q16822 640 aa16.7■□□□□ 0.26
PNKP-207ENST00000596014 TEX30Q5JUR7 227 aa16.7■□□□□ 0.26
PNKP-207ENST00000596014 NXNL2Q5VZ03 156 aa16.7■□□□□ 0.26
PNKP-207ENST00000596014 CNIH3Q8TBE1 160 aa16.7■□□□□ 0.26
PNKP-207ENST00000596014 FAM81AQ8TBF8 368 aa16.7■□□□□ 0.26
PNKP-207ENST00000596014 TRUB1Q8WWH5 349 aaKnown RBP16.7■□□□□ 0.26
PNKP-207ENST00000596014 UBE2FQ969M7 185 aa16.7■□□□□ 0.26
PNKP-207ENST00000596014 TMIGD2Q96BF3 282 aa16.7■□□□□ 0.26
PNKP-207ENST00000596014 GDF2Q9UK05 429 aaPredicted RBP16.7■□□□□ 0.26
PNKP-207ENST00000596014 C5orf49A4QMS7 147 aa16.69■□□□□ 0.26
PNKP-207ENST00000596014 SYNGR3O43761 229 aa16.69■□□□□ 0.26
PNKP-207ENST00000596014 TMCC2O75069 709 aa16.69■□□□□ 0.26
PNKP-207ENST00000596014 SPARCP09486 303 aa16.69■□□□□ 0.26
PNKP-207ENST00000596014 COX5BP10606 129 aa16.69■□□□□ 0.26
PNKP-207ENST00000596014 PSKH1P11801 424 aa16.69■□□□□ 0.26
PNKP-207ENST00000596014 CCNOP22674 350 aa16.69■□□□□ 0.26
PNKP-207ENST00000596014 NR4A1P22736 598 aa16.69■□□□□ 0.26
PNKP-207ENST00000596014 GDI2P50395 445 aaKnown RBP16.69■□□□□ 0.26
PNKP-207ENST00000596014 CFAP77Q6ZQR2 320 aa16.69■□□□□ 0.26
PNKP-207ENST00000596014 KCTD8Q6ZWB6 473 aa16.69■□□□□ 0.26
PNKP-207ENST00000596014 ERI1Q8IV48 349 aaKnown RBP16.69■□□□□ 0.26
PNKP-207ENST00000596014 TIGD4Q8IY51 512 aa16.69■□□□□ 0.26
PNKP-207ENST00000596014 INTS14Q96SY0 518 aa16.69■□□□□ 0.26
PNKP-207ENST00000596014 CDH20Q9HBT6 801 aa16.69■□□□□ 0.26
PNKP-207ENST00000596014 IMPAD1Q9NX62 359 aa16.69■□□□□ 0.26
PNKP-207ENST00000596014 PTTG2Q9NZH5 202 aa16.69■□□□□ 0.26
PNKP-207ENST00000596014 H2AFY2Q9P0M6 372 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms