RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 NDUFB6O95139 128 aa15.33■□□□□ 0.05
SHKBP1-205ENST00000594973 PLGP00747 810 aaPredicted RBP15.33■□□□□ 0.05
SHKBP1-205ENST00000594973 SPP1P10451 314 aa15.33■□□□□ 0.05
SHKBP1-205ENST00000594973 S100PP25815 95 aa15.33■□□□□ 0.05
SHKBP1-205ENST00000594973 CAPZA2P47755 286 aa15.33■□□□□ 0.05
SHKBP1-205ENST00000594973 ARHGDIBP52566 201 aa15.33■□□□□ 0.05
SHKBP1-205ENST00000594973 RELL2Q8NC24 303 aaPredicted RBP15.33■□□□□ 0.05
SHKBP1-205ENST00000594973 PGLYRP3Q96LB9 341 aa15.33■□□□□ 0.05
SHKBP1-205ENST00000594973 BCL2L14Q9BZR8 327 aa15.33■□□□□ 0.05
SHKBP1-205ENST00000594973 FKRPQ9H9S5 495 aa15.33■□□□□ 0.05
SHKBP1-205ENST00000594973 TAS2R10Q9NYW0 307 aa15.33■□□□□ 0.05
SHKBP1-205ENST00000594973 TMED7Q9Y3B3 224 aa15.33■□□□□ 0.05
SHKBP1-205ENST00000594973 NCOR1O75376 2440 aa15.33■□□□□ 0.04
SHKBP1-205ENST00000594973 FREM2Q5SZK8 3169 aa15.33■□□□□ 0.04
SHKBP1-205ENST00000594973 A0A1W2PPK0 400 aa15.33■□□□□ 0.04
SHKBP1-205ENST00000594973 TMEM72A0PK05 275 aa15.33■□□□□ 0.04
SHKBP1-205ENST00000594973 TMEM200CA6NKL6 621 aa15.33■□□□□ 0.04
SHKBP1-205ENST00000594973 VSTM2BA6NLU5 285 aa15.33■□□□□ 0.04
SHKBP1-205ENST00000594973 GLCEO94923 617 aa15.33■□□□□ 0.04
SHKBP1-205ENST00000594973 CER1O95813 267 aa15.33■□□□□ 0.04
SHKBP1-205ENST00000594973 ZNF28P17035 718 aa15.33■□□□□ 0.04
SHKBP1-205ENST00000594973 PSMB10P40306 273 aa15.33■□□□□ 0.04
SHKBP1-205ENST00000594973 POLR2HP52434 150 aaKnown RBP15.33■□□□□ 0.04
SHKBP1-205ENST00000594973 ACTA2P62736 377 aa15.33■□□□□ 0.04
SHKBP1-205ENST00000594973 ACTG2P63267 376 aa15.33■□□□□ 0.04
SHKBP1-205ENST00000594973 MESTQ5EB52 335 aa15.33■□□□□ 0.04
SHKBP1-205ENST00000594973 SLC35D3Q5M8T2 416 aa15.33■□□□□ 0.04
SHKBP1-205ENST00000594973 LINC01590Q5TEZ4 76 aa15.33■□□□□ 0.04
SHKBP1-205ENST00000594973 TMEM88Q6PEY1 159 aa15.33■□□□□ 0.04
SHKBP1-205ENST00000594973 CPEB2Q7Z5Q1 589 aaKnown RBP15.33■□□□□ 0.04
SHKBP1-205ENST00000594973 SERPINA12Q8IW75 414 aa15.33■□□□□ 0.04
SHKBP1-205ENST00000594973 OR51M1Q9H341 326 aa15.33■□□□□ 0.04
SHKBP1-205ENST00000594973 ANKRD20A5PA0PJZ0 165 aa15.32■□□□□ 0.04
SHKBP1-205ENST00000594973 BGLAPP02818 100 aa15.32■□□□□ 0.04
SHKBP1-205ENST00000594973 HEXAP06865 529 aa15.32■□□□□ 0.04
SHKBP1-205ENST00000594973 ANXA7P20073 488 aaKnown RBP15.32■□□□□ 0.04
SHKBP1-205ENST00000594973 KCNJ3P48549 501 aa15.32■□□□□ 0.04
SHKBP1-205ENST00000594973 SLC26A5P58743 744 aa15.32■□□□□ 0.04
SHKBP1-205ENST00000594973 MRPS10P82664 201 aaKnown RBP15.32■□□□□ 0.04
SHKBP1-205ENST00000594973 PEAR1Q5VY43 1037 aaPredicted RBP15.32■□□□□ 0.04
SHKBP1-205ENST00000594973 DMKNQ6E0U4 476 aaPredicted RBP15.32■□□□□ 0.04
SHKBP1-205ENST00000594973 LINGO2Q7L985 606 aa15.32■□□□□ 0.04
SHKBP1-205ENST00000594973 MRPL15Q9P015 296 aaKnown RBP15.32■□□□□ 0.04
SHKBP1-205ENST00000594973 NCDNQ9UBB6 729 aa15.32■□□□□ 0.04
SHKBP1-205ENST00000594973 ST6GALNAC2Q9UJ37 374 aa15.32■□□□□ 0.04
SHKBP1-205ENST00000594973 GPR31O00270 319 aa15.32■□□□□ 0.04
SHKBP1-205ENST00000594973 STARP49675 285 aa15.32■□□□□ 0.04
SHKBP1-205ENST00000594973 ACSM3Q53FZ2 586 aa15.32■□□□□ 0.04
SHKBP1-205ENST00000594973 PHYHIPLQ96FC7 376 aa15.32■□□□□ 0.04
SHKBP1-205ENST00000594973 ZC3H10Q96K80 434 aaKnown RBP15.32■□□□□ 0.04
SHKBP1-205ENST00000594973 CMSS1Q9BQ75 279 aaKnown RBP15.32■□□□□ 0.04
SHKBP1-205ENST00000594973 RXFP3Q9NSD7 469 aa15.32■□□□□ 0.04
SHKBP1-205ENST00000594973 ZFP57Q9NU63 452 aa15.32■□□□□ 0.04
SHKBP1-205ENST00000594973 PCDHGA5Q9Y5G8 931 aa15.32■□□□□ 0.04
SHKBP1-205ENST00000594973 A0A0D9SG52 128 aa15.31■□□□□ 0.04
SHKBP1-205ENST00000594973 TVP23AA6NH52 213 aa15.31■□□□□ 0.04
SHKBP1-205ENST00000594973 ADAM10O14672 748 aa15.31■□□□□ 0.04
SHKBP1-205ENST00000594973 CCL4P13236 92 aa15.31■□□□□ 0.04
SHKBP1-205ENST00000594973 APEHP13798 732 aaKnown RBP15.31■□□□□ 0.04
SHKBP1-205ENST00000594973 ART1P52961 327 aa15.31■□□□□ 0.04
SHKBP1-205ENST00000594973 H2BFSP57053 126 aa15.31■□□□□ 0.04
SHKBP1-205ENST00000594973 SIRPAP78324 504 aa15.31■□□□□ 0.04
SHKBP1-205ENST00000594973 MELKQ14680 651 aa15.31■□□□□ 0.04
SHKBP1-205ENST00000594973 LINC00303Q3SY05 128 aa15.31■□□□□ 0.04
SHKBP1-205ENST00000594973 C10orf91Q5T1B1 145 aa15.31■□□□□ 0.04
SHKBP1-205ENST00000594973 ELP2Q6IA86 826 aa15.31■□□□□ 0.04
SHKBP1-205ENST00000594973 MTFR2Q6P444 385 aa15.31■□□□□ 0.04
SHKBP1-205ENST00000594973 ESPNLQ6ZVH7 1005 aa15.31■□□□□ 0.04
SHKBP1-205ENST00000594973 GRINAQ7Z429 371 aa15.31■□□□□ 0.04
SHKBP1-205ENST00000594973 DNAAF1Q8NEP3 725 aa15.31■□□□□ 0.04
SHKBP1-205ENST00000594973 TMEM185AQ8NFB2 350 aa15.31■□□□□ 0.04
SHKBP1-205ENST00000594973 OR52I2Q8NH67 350 aa15.31■□□□□ 0.04
SHKBP1-205ENST00000594973 NUBPLQ8TB37 319 aa15.31■□□□□ 0.04
SHKBP1-205ENST00000594973 FCAMRQ8WWV6 532 aa15.31■□□□□ 0.04
SHKBP1-205ENST00000594973 MRPL48Q96GC5 212 aaKnown RBP15.31■□□□□ 0.04
SHKBP1-205ENST00000594973 GINS4Q9BRT9 223 aa15.31■□□□□ 0.04
SHKBP1-205ENST00000594973 SYT4Q9H2B2 425 aa15.31■□□□□ 0.04
SHKBP1-205ENST00000594973 VDAC3Q9Y277 283 aa15.31■□□□□ 0.04
SHKBP1-205ENST00000594973 FLRT2O43155 660 aa15.31■□□□□ 0.04
SHKBP1-205ENST00000594973 ZNF806P0C7X5 589 aa15.31■□□□□ 0.04
SHKBP1-205ENST00000594973 PAN3Q58A45 887 aaKnown RBP15.31■□□□□ 0.04
SHKBP1-205ENST00000594973 C1orf140Q5VVS0 124 aa15.31■□□□□ 0.04
SHKBP1-205ENST00000594973 TCEAL6Q6IPX3 200 aa15.31■□□□□ 0.04
SHKBP1-205ENST00000594973 MAMDC2Q7Z304 686 aaPredicted RBP15.31■□□□□ 0.04
SHKBP1-205ENST00000594973 CMTM4Q8IZR5 234 aa15.31■□□□□ 0.04
SHKBP1-205ENST00000594973 SYS1Q8N2H4 156 aa15.31■□□□□ 0.04
SHKBP1-205ENST00000594973 PDCD1LG2Q9BQ51 273 aa15.31■□□□□ 0.04
SHKBP1-205ENST00000594973 TCEAL7Q9BRU2 100 aa15.31■□□□□ 0.04
SHKBP1-205ENST00000594973 CARHSP1Q9Y2V2 147 aaKnown RBP15.31■□□□□ 0.04
SHKBP1-205ENST00000594973 TRBV2A0A0J9YWF9 115 aa15.3■□□□□ 0.04
SHKBP1-205ENST00000594973 RFPL4AA6NLU0 287 aa15.3■□□□□ 0.04
SHKBP1-205ENST00000594973 A8MVM7 634 aa15.3■□□□□ 0.04
SHKBP1-205ENST00000594973 PRR32B1ATL7 298 aa15.3■□□□□ 0.04
SHKBP1-205ENST00000594973 RFPL4AL1F8VTS6 287 aa15.3■□□□□ 0.04
SHKBP1-205ENST00000594973 OR2J2O76002 312 aa15.3■□□□□ 0.04
SHKBP1-205ENST00000594973 GPANK1O95872 356 aa15.3■□□□□ 0.04
SHKBP1-205ENST00000594973 CRYBA1P05813 215 aa15.3■□□□□ 0.04
SHKBP1-205ENST00000594973 ZNF35P13682 527 aa15.3■□□□□ 0.04
SHKBP1-205ENST00000594973 EDNRAP25101 427 aa15.3■□□□□ 0.04
SHKBP1-205ENST00000594973 SLC25A1P53007 311 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms