RNA–Protein interactions for RNA: ENST00000594504.5

UPF1-203, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-203ENST00000594504 GALK2Q01415 458 aa10.68□□□□□ -0.7
UPF1-203ENST00000594504 KPNB1Q14974 876 aaKnown RBP10.68□□□□□ -0.7
UPF1-203ENST00000594504 SLC35F1Q5T1Q4 408 aa10.68□□□□□ -0.7
UPF1-203ENST00000594504 LEG1Q6P5S2 330 aa10.68□□□□□ -0.7
UPF1-203ENST00000594504 C10orf67Q8IYJ2 551 aa10.68□□□□□ -0.7
UPF1-203ENST00000594504 LNX2Q8N448 690 aa10.68□□□□□ -0.7
UPF1-203ENST00000594504 LRRC18Q8N456 261 aa10.68□□□□□ -0.7
UPF1-203ENST00000594504 RFLNBQ8N5W9 214 aa10.68□□□□□ -0.7
UPF1-203ENST00000594504 ATG16L2Q8NAA4 619 aa10.68□□□□□ -0.7
UPF1-203ENST00000594504 OR2T33Q8NG76 320 aa10.68□□□□□ -0.7
UPF1-203ENST00000594504 OR4K13Q8NH42 304 aa10.68□□□□□ -0.7
UPF1-203ENST00000594504 OR5K1Q8NHB7 308 aa10.68□□□□□ -0.7
UPF1-203ENST00000594504 TEX47Q8TBZ9 253 aa10.68□□□□□ -0.7
UPF1-203ENST00000594504 DNAJC9Q8WXX5 260 aa10.68□□□□□ -0.7
UPF1-203ENST00000594504 RDH5Q92781 318 aa10.68□□□□□ -0.7
UPF1-203ENST00000594504 NMNAT3Q96T66 252 aa10.68□□□□□ -0.7
UPF1-203ENST00000594504 NUAK2Q9H093 628 aa10.68□□□□□ -0.7
UPF1-203ENST00000594504 OCEL1Q9H607 264 aa10.68□□□□□ -0.7
UPF1-203ENST00000594504 METTL17Q9H7H0 456 aaPredicted RBP10.68□□□□□ -0.7
UPF1-203ENST00000594504 RNF121Q9H920 327 aa10.68□□□□□ -0.7
UPF1-203ENST00000594504 CCNB1IP1Q9NPC3 277 aa10.68□□□□□ -0.7
UPF1-203ENST00000594504 POLE4Q9NR33 117 aa10.68□□□□□ -0.7
UPF1-203ENST00000594504 ZNF275Q9NSD4 429 aaPredicted RBP10.68□□□□□ -0.7
UPF1-203ENST00000594504 H3BN98 237 aa10.67□□□□□ -0.7
UPF1-203ENST00000594504 RGS9O75916 674 aaPredicted RBP10.67□□□□□ -0.7
UPF1-203ENST00000594504 VENTXO95231 258 aa10.67□□□□□ -0.7
UPF1-203ENST00000594504 PTHP01270 115 aa10.67□□□□□ -0.7
UPF1-203ENST00000594504 SERPINA5P05154 406 aa10.67□□□□□ -0.7
UPF1-203ENST00000594504 CST2P09228 141 aa10.67□□□□□ -0.7
UPF1-203ENST00000594504 MMP7P09237 267 aaPredicted RBP10.67□□□□□ -0.7
UPF1-203ENST00000594504 LAP3P28838 519 aa10.67□□□□□ -0.7
UPF1-203ENST00000594504 PCBD1P61457 104 aa10.67□□□□□ -0.7
UPF1-203ENST00000594504 PLP2Q04941 152 aa10.67□□□□□ -0.7
UPF1-203ENST00000594504 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.67□□□□□ -0.7
UPF1-203ENST00000594504 SLC36A3Q495N2 470 aa10.67□□□□□ -0.7
UPF1-203ENST00000594504 ZFP1Q6P2D0 407 aa10.67□□□□□ -0.7
UPF1-203ENST00000594504 GLB1L2Q8IW92 636 aa10.67□□□□□ -0.7
UPF1-203ENST00000594504 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.67□□□□□ -0.7
UPF1-203ENST00000594504 NPEPL1Q8NDH3 523 aa10.67□□□□□ -0.7
UPF1-203ENST00000594504 SDR9C7Q8NEX9 313 aa10.67□□□□□ -0.7
UPF1-203ENST00000594504 OR52E2Q8NGJ4 325 aa10.67□□□□□ -0.7
UPF1-203ENST00000594504 LRTOMTQ8WZ04 291 aa10.67□□□□□ -0.7
UPF1-203ENST00000594504 WACQ9BTA9 647 aa10.67□□□□□ -0.7
UPF1-203ENST00000594504 RACGAP1Q9H0H5 632 aa10.67□□□□□ -0.7
UPF1-203ENST00000594504 C1orf198Q9H425 327 aa10.67□□□□□ -0.7
UPF1-203ENST00000594504 RERGLQ9H628 205 aa10.67□□□□□ -0.7
UPF1-203ENST00000594504 TAAR3PQ9P1P4 343 aa10.67□□□□□ -0.7
UPF1-203ENST00000594504 KIF17Q9P2E2 1029 aa10.67□□□□□ -0.7
UPF1-203ENST00000594504 METRNQ9UJH8 293 aa10.67□□□□□ -0.7
UPF1-203ENST00000594504 COA3Q9Y2R0 106 aaPredicted RBP10.67□□□□□ -0.7
UPF1-203ENST00000594504 ATRQ13535 2644 aa10.66□□□□□ -0.7
UPF1-203ENST00000594504 IQCMA0A1B0GVH7 501 aa10.66□□□□□ -0.7
UPF1-203ENST00000594504 A0A1W2PPW3 197 aa10.66□□□□□ -0.7
UPF1-203ENST00000594504 C12orf71A8MTZ7 269 aa10.66□□□□□ -0.7
UPF1-203ENST00000594504 B4DSR2 109 aa10.66□□□□□ -0.7
UPF1-203ENST00000594504 G3V2T6 193 aa10.66□□□□□ -0.7
UPF1-203ENST00000594504 PPIHO43447 177 aaKnown RBP10.66□□□□□ -0.7
UPF1-203ENST00000594504 CDC14BO60729 498 aa10.66□□□□□ -0.7
UPF1-203ENST00000594504 OSMP13725 252 aa10.66□□□□□ -0.7
UPF1-203ENST00000594504 ACHEP22303 614 aa10.66□□□□□ -0.7
UPF1-203ENST00000594504 HSF2Q03933 536 aa10.66□□□□□ -0.7
UPF1-203ENST00000594504 GABPB1Q06547 395 aaPredicted RBP10.66□□□□□ -0.7
UPF1-203ENST00000594504 ENDOGQ14249 297 aaKnown RBP10.66□□□□□ -0.7
UPF1-203ENST00000594504 AVPI1Q5T686 147 aa10.66□□□□□ -0.7
UPF1-203ENST00000594504 RGS7BPQ6MZT1 257 aaPredicted RBP10.66□□□□□ -0.7
UPF1-203ENST00000594504 FAHD1Q6P587 224 aa10.66□□□□□ -0.7
UPF1-203ENST00000594504 AMIGO2Q86SJ2 522 aa10.66□□□□□ -0.7
UPF1-203ENST00000594504 SYT9Q86SS6 491 aa10.66□□□□□ -0.7
UPF1-203ENST00000594504 ZBTB46Q86UZ6 589 aa10.66□□□□□ -0.7
UPF1-203ENST00000594504 GLCCI1Q86VQ1 547 aa10.66□□□□□ -0.7
UPF1-203ENST00000594504 ZDHHC13Q8IUH4 622 aa10.66□□□□□ -0.7
UPF1-203ENST00000594504 OR6V1Q8N148 313 aa10.66□□□□□ -0.7
UPF1-203ENST00000594504 OR4Q3Q8NH05 313 aa10.66□□□□□ -0.7
UPF1-203ENST00000594504 PYDC1Q8WXC3 89 aa10.66□□□□□ -0.7
UPF1-203ENST00000594504 GTF3AQ92664 365 aaKnown RBP10.66□□□□□ -0.7
UPF1-203ENST00000594504 TMEM186Q96B77 213 aa10.66□□□□□ -0.7
UPF1-203ENST00000594504 CENPNQ96H22 339 aaPredicted RBP10.66□□□□□ -0.7
UPF1-203ENST00000594504 TSSK2Q96PF2 358 aa10.66□□□□□ -0.7
UPF1-203ENST00000594504 ZNF416Q9BWM5 594 aa10.66□□□□□ -0.7
UPF1-203ENST00000594504 RPRD1BQ9NQG5 326 aaKnown RBP10.66□□□□□ -0.7
UPF1-203ENST00000594504 HIF1ANQ9NWT6 349 aa10.66□□□□□ -0.7
UPF1-203ENST00000594504 KLHL21Q9UJP4 597 aa10.66□□□□□ -0.7
UPF1-203ENST00000594504 B9D1Q9UPM9 204 aa10.66□□□□□ -0.7
UPF1-203ENST00000594504 TIMM10BQ9Y5J6 103 aa10.66□□□□□ -0.7
UPF1-203ENST00000594504 IGLV1-36A0A0B4J1U3 117 aa10.65□□□□□ -0.7
UPF1-203ENST00000594504 OR6C68A6NDL8 312 aa10.65□□□□□ -0.7
UPF1-203ENST00000594504 RIIAD1A6NNX1 92 aa10.65□□□□□ -0.7
UPF1-203ENST00000594504 DCTN6O00399 190 aa10.65□□□□□ -0.7
UPF1-203ENST00000594504 RP2O75695 350 aa10.65□□□□□ -0.7
UPF1-203ENST00000594504 IFNGP01579 166 aa10.65□□□□□ -0.7
UPF1-203ENST00000594504 SCG5P05408 212 aa10.65□□□□□ -0.7
UPF1-203ENST00000594504 LCKP06239 509 aa10.65□□□□□ -0.7
UPF1-203ENST00000594504 GAAP10253 952 aa10.65□□□□□ -0.7
UPF1-203ENST00000594504 ZNF32P17041 273 aa10.65□□□□□ -0.7
UPF1-203ENST00000594504 POU1F1P28069 291 aa10.65□□□□□ -0.7
UPF1-203ENST00000594504 GRK5P34947 590 aa10.65□□□□□ -0.7
UPF1-203ENST00000594504 LMO4P61968 165 aa10.65□□□□□ -0.7
UPF1-203ENST00000594504 LSM6P62312 80 aaKnown RBP10.65□□□□□ -0.7
UPF1-203ENST00000594504 CCL8P80075 99 aa10.65□□□□□ -0.7
UPF1-203ENST00000594504 MVKQ03426 396 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms