RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 MOGAT2Q3SYC2 334 aa14.79□□□□□ -0.04
LIG1-206ENST00000594067 KCNRGQ8N5I3 272 aa14.79□□□□□ -0.04
LIG1-206ENST00000594067 JAGN1Q8N5M9 183 aa14.79□□□□□ -0.04
LIG1-206ENST00000594067 CCDC107Q8WV48 283 aa14.79□□□□□ -0.04
LIG1-206ENST00000594067 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.79□□□□□ -0.04
LIG1-206ENST00000594067 DUX4Q9UBX2 424 aa14.79□□□□□ -0.04
LIG1-206ENST00000594067 MSRAQ9UJ68 235 aa14.79□□□□□ -0.04
LIG1-206ENST00000594067 SEC16AO15027 2179 aa14.79□□□□□ -0.04
LIG1-206ENST00000594067 OR5H14A6NHG9 310 aa14.79□□□□□ -0.04
LIG1-206ENST00000594067 PCP4L1A6NKN8 68 aa14.79□□□□□ -0.04
LIG1-206ENST00000594067 PLPP3O14495 311 aa14.79□□□□□ -0.04
LIG1-206ENST00000594067 LMX1BO60663 402 aa14.79□□□□□ -0.04
LIG1-206ENST00000594067 DXOO77932 396 aaKnown RBP14.79□□□□□ -0.04
LIG1-206ENST00000594067 IGLV3-19P01714 112 aa14.79□□□□□ -0.04
LIG1-206ENST00000594067 POLR2HP52434 150 aaKnown RBP14.79□□□□□ -0.04
LIG1-206ENST00000594067 CTAG1AP78358 180 aa14.79□□□□□ -0.04
LIG1-206ENST00000594067 NSDHLQ15738 373 aa14.79□□□□□ -0.04
LIG1-206ENST00000594067 CLVS2Q5SYC1 327 aa14.79□□□□□ -0.04
LIG1-206ENST00000594067 OR13C3Q8NGS6 347 aa14.79□□□□□ -0.04
LIG1-206ENST00000594067 NKX6-2Q9C056 277 aaPredicted RBP14.79□□□□□ -0.04
LIG1-206ENST00000594067 WWTR1Q9GZV5 400 aa14.79□□□□□ -0.04
LIG1-206ENST00000594067 TMEM185BQ9H7F4 350 aa14.79□□□□□ -0.04
LIG1-206ENST00000594067 PCDH15Q96QU1 1955 aa14.78□□□□□ -0.04
LIG1-206ENST00000594067 TTLL8A6PVC2 850 aa14.78□□□□□ -0.04
LIG1-206ENST00000594067 NPIPB7O75200 414 aa14.78□□□□□ -0.04
LIG1-206ENST00000594067 CSN2P05814 226 aa14.78□□□□□ -0.04
LIG1-206ENST00000594067 IGFBP3P17936 291 aaPredicted RBP14.78□□□□□ -0.04
LIG1-206ENST00000594067 CNR1P21554 472 aa14.78□□□□□ -0.04
LIG1-206ENST00000594067 ABCD3P28288 659 aa14.78□□□□□ -0.04
LIG1-206ENST00000594067 DNASE1L1P49184 302 aa14.78□□□□□ -0.04
LIG1-206ENST00000594067 STARP49675 285 aa14.78□□□□□ -0.04
LIG1-206ENST00000594067 NR0B2Q15466 257 aa14.78□□□□□ -0.04
LIG1-206ENST00000594067 GKN2Q86XP6 184 aa14.78□□□□□ -0.04
LIG1-206ENST00000594067 LINC00346Q8IVM7 164 aa14.78□□□□□ -0.04
LIG1-206ENST00000594067 TMEM229BQ8NBD8 167 aa14.78□□□□□ -0.04
LIG1-206ENST00000594067 STEAP2Q8NFT2 490 aa14.78□□□□□ -0.04
LIG1-206ENST00000594067 OR52N5Q8NH56 324 aa14.78□□□□□ -0.04
LIG1-206ENST00000594067 FAM174AQ8TBP5 190 aa14.78□□□□□ -0.04
LIG1-206ENST00000594067 POTEKPQ9BYX7 375 aa14.78□□□□□ -0.04
LIG1-206ENST00000594067 UPB1Q9UBR1 384 aa14.78□□□□□ -0.04
LIG1-206ENST00000594067 FBXO4Q9UKT5 387 aa14.78□□□□□ -0.04
LIG1-206ENST00000594067 FARSAQ9Y285 508 aaKnown RBP14.78□□□□□ -0.04
LIG1-206ENST00000594067 PRELID3BQ9Y3B1 194 aa14.78□□□□□ -0.04
LIG1-206ENST00000594067 ZNF175Q9Y473 711 aa14.78□□□□□ -0.04
LIG1-206ENST00000594067 PCNX3Q9H6A9 2034 aa14.78□□□□□ -0.04
LIG1-206ENST00000594067 A0A1B0GTI1 187 aa14.78□□□□□ -0.04
LIG1-206ENST00000594067 A8MVM7 634 aa14.78□□□□□ -0.04
LIG1-206ENST00000594067 SOX1O00570 391 aaPredicted RBP14.78□□□□□ -0.04
LIG1-206ENST00000594067 GP1BAP07359 652 aa14.78□□□□□ -0.04
LIG1-206ENST00000594067 ZNF28P17035 718 aa14.78□□□□□ -0.04
LIG1-206ENST00000594067 CD96P40200 585 aa14.78□□□□□ -0.04
LIG1-206ENST00000594067 LUMP51884 338 aaPredicted RBP14.78□□□□□ -0.04
LIG1-206ENST00000594067 DCAF7P61962 342 aa14.78□□□□□ -0.04
LIG1-206ENST00000594067 SHEQ5VZ18 495 aa14.78□□□□□ -0.04
LIG1-206ENST00000594067 TMEM17Q86X19 198 aa14.78□□□□□ -0.04
LIG1-206ENST00000594067 OR5T2Q8NGG2 359 aa14.78□□□□□ -0.04
LIG1-206ENST00000594067 HPF1Q9NWY4 346 aa14.78□□□□□ -0.04
LIG1-206ENST00000594067 PURGQ9UJV8 347 aaKnown RBP14.78□□□□□ -0.04
LIG1-206ENST00000594067 TNFSF18Q9UNG2 199 aa14.78□□□□□ -0.04
LIG1-206ENST00000594067 TRIOO75962 3097 aa14.77□□□□□ -0.04
LIG1-206ENST00000594067 A0A1W2PQD3 144 aa14.77□□□□□ -0.04
LIG1-206ENST00000594067 FOXL2P58012 376 aa14.77□□□□□ -0.04
LIG1-206ENST00000594067 FLI1Q01543 452 aaPredicted RBP14.77□□□□□ -0.04
LIG1-206ENST00000594067 FMODQ06828 376 aa14.77□□□□□ -0.04
LIG1-206ENST00000594067 PMPCAQ10713 525 aa14.77□□□□□ -0.04
LIG1-206ENST00000594067 SCGB2B2Q4G0G5 96 aa14.77□□□□□ -0.04
LIG1-206ENST00000594067 OR1J2Q8NGS2 313 aa14.77□□□□□ -0.04
LIG1-206ENST00000594067 NKD1Q969G9 470 aa14.77□□□□□ -0.04
LIG1-206ENST00000594067 ZNF75AQ96N20 296 aa14.77□□□□□ -0.04
LIG1-206ENST00000594067 SLC25A21Q9BQT8 299 aaPredicted RBP14.77□□□□□ -0.04
LIG1-206ENST00000594067 GPN3Q9UHW5 284 aaPredicted RBP14.77□□□□□ -0.04
LIG1-206ENST00000594067 KLF2Q9Y5W3 355 aaPredicted RBP14.77□□□□□ -0.04
LIG1-206ENST00000594067 LOC101059948A0A1B0GTJ6 334 aa14.77□□□□□ -0.05
LIG1-206ENST00000594067 LOC107986453A0A1B0GWG9 222 aa14.77□□□□□ -0.05
LIG1-206ENST00000594067 SULT1C2O00338 296 aa14.77□□□□□ -0.05
LIG1-206ENST00000594067 AHSA1O95433 338 aa14.77□□□□□ -0.05
LIG1-206ENST00000594067 LIPCP11150 499 aa14.77□□□□□ -0.05
LIG1-206ENST00000594067 NME1P15531 152 aaKnown RBP14.77□□□□□ -0.05
LIG1-206ENST00000594067 GLO1Q04760 184 aa14.77□□□□□ -0.05
LIG1-206ENST00000594067 SRSF4Q08170 494 aaKnown RBP14.77□□□□□ -0.05
LIG1-206ENST00000594067 ZNF345Q14585 488 aa14.77□□□□□ -0.05
LIG1-206ENST00000594067 ATPAF1Q5TC12 328 aaPredicted RBP14.77□□□□□ -0.05
LIG1-206ENST00000594067 C1orf189Q5VU69 101 aa14.77□□□□□ -0.05
LIG1-206ENST00000594067 ADGRE4PQ86SQ3 457 aa14.77□□□□□ -0.05
LIG1-206ENST00000594067 OR5M8Q8NGP6 311 aa14.77□□□□□ -0.05
LIG1-206ENST00000594067 GPR119Q8TDV5 335 aa14.77□□□□□ -0.05
LIG1-206ENST00000594067 EDAQ92838 391 aa14.77□□□□□ -0.05
LIG1-206ENST00000594067 HHLA2Q9UM44 414 aa14.77□□□□□ -0.05
LIG1-206ENST00000594067 R4GMQ9 66 aa14.77□□□□□ -0.05
LIG1-206ENST00000594067 C2orf72A6NCS6 295 aa14.76□□□□□ -0.05
LIG1-206ENST00000594067 TMEM235A6NFC5 223 aa14.76□□□□□ -0.05
LIG1-206ENST00000594067 H3BMH7 237 aa14.76□□□□□ -0.05
LIG1-206ENST00000594067 ZNF735P0CB33 412 aa14.76□□□□□ -0.05
LIG1-206ENST00000594067 LTBRP36941 435 aa14.76□□□□□ -0.05
LIG1-206ENST00000594067 FGL1Q08830 312 aa14.76□□□□□ -0.05
LIG1-206ENST00000594067 TOMM20Q15388 145 aa14.76□□□□□ -0.05
LIG1-206ENST00000594067 C11orf87Q6NUJ2 197 aa14.76□□□□□ -0.05
LIG1-206ENST00000594067 SLC29A4Q7RTT9 530 aa14.76□□□□□ -0.05
LIG1-206ENST00000594067 OR2W3Q7Z3T1 314 aa14.76□□□□□ -0.05
LIG1-206ENST00000594067 DCXRQ7Z4W1 244 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms