RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 TRIM15Q9C019 465 aa13.02□□□□□ -0.33
TRIM28-203ENST00000593582 SAP30LQ9HAJ7 183 aa13.02□□□□□ -0.33
TRIM28-203ENST00000593582 SRA1Q9HD15 236 aaKnown RBP13.02□□□□□ -0.33
TRIM28-203ENST00000593582 TUBG2Q9NRH3 451 aa13.02□□□□□ -0.33
TRIM28-203ENST00000593582 B9D1Q9UPM9 204 aa13.02□□□□□ -0.33
TRIM28-203ENST00000593582 GRIP1Q9Y3R0 1128 aa13.02□□□□□ -0.33
TRIM28-203ENST00000593582 IGHV1-69-2A0A0G2JMI3 117 aa13.01□□□□□ -0.33
TRIM28-203ENST00000593582 TCRBV5S2A0A599 114 aa13.01□□□□□ -0.33
TRIM28-203ENST00000593582 OR6C6A6NF89 314 aa13.01□□□□□ -0.33
TRIM28-203ENST00000593582 DCTN6O00399 190 aa13.01□□□□□ -0.33
TRIM28-203ENST00000593582 RER1O15258 196 aa13.01□□□□□ -0.33
TRIM28-203ENST00000593582 SPRY3O43610 288 aa13.01□□□□□ -0.33
TRIM28-203ENST00000593582 RP2O75695 350 aa13.01□□□□□ -0.33
TRIM28-203ENST00000593582 T-ENOLP0DO92 83 aa13.01□□□□□ -0.33
TRIM28-203ENST00000593582 IGFBP5P24593 272 aa13.01□□□□□ -0.33
TRIM28-203ENST00000593582 CRYBB2P43320 205 aa13.01□□□□□ -0.33
TRIM28-203ENST00000593582 MMP15P51511 669 aa13.01□□□□□ -0.33
TRIM28-203ENST00000593582 FAM98BQ52LJ0 330 aaKnown RBP13.01□□□□□ -0.33
TRIM28-203ENST00000593582 CLEC12AQ5QGZ9 265 aa13.01□□□□□ -0.33
TRIM28-203ENST00000593582 FAM120AOSQ5T036 256 aa13.01□□□□□ -0.33
TRIM28-203ENST00000593582 OR6V1Q8N148 313 aa13.01□□□□□ -0.33
TRIM28-203ENST00000593582 GJC3Q8NFK1 279 aa13.01□□□□□ -0.33
TRIM28-203ENST00000593582 OR9Q2Q8NGE9 314 aa13.01□□□□□ -0.33
TRIM28-203ENST00000593582 COG8Q96MW5 612 aa13.01□□□□□ -0.33
TRIM28-203ENST00000593582 BTBD10Q9BSF8 475 aa13.01□□□□□ -0.33
TRIM28-203ENST00000593582 RACGAP1Q9H0H5 632 aa13.01□□□□□ -0.33
TRIM28-203ENST00000593582 C1orf21Q9H246 121 aa13.01□□□□□ -0.33
TRIM28-203ENST00000593582 NARFLQ9H6Q4 476 aa13.01□□□□□ -0.33
TRIM28-203ENST00000593582 RPRD1BQ9NQG5 326 aaKnown RBP13.01□□□□□ -0.33
TRIM28-203ENST00000593582 ATPIF1Q9UII2 106 aa13.01□□□□□ -0.33
TRIM28-203ENST00000593582 ZDHHC8Q9ULC8 765 aa13.01□□□□□ -0.33
TRIM28-203ENST00000593582 FBN1P35555 2871 aaKnown RBP13□□□□□ -0.33
TRIM28-203ENST00000593582 IGLV1-36A0A0B4J1U3 117 aa13□□□□□ -0.33
TRIM28-203ENST00000593582 TIMM8AO60220 97 aaPredicted RBP13□□□□□ -0.33
TRIM28-203ENST00000593582 CCNB2O95067 398 aa13□□□□□ -0.33
TRIM28-203ENST00000593582 GPANK1O95872 356 aa13□□□□□ -0.33
TRIM28-203ENST00000593582 IGHV1-46P01743 117 aa13□□□□□ -0.33
TRIM28-203ENST00000593582 GAAP10253 952 aa13□□□□□ -0.33
TRIM28-203ENST00000593582 CDH15P55291 814 aa13□□□□□ -0.33
TRIM28-203ENST00000593582 MS4A2Q01362 244 aa13□□□□□ -0.33
TRIM28-203ENST00000593582 PSG7Q13046 419 aa13□□□□□ -0.33
TRIM28-203ENST00000593582 MEP1BQ16820 701 aa13□□□□□ -0.33
TRIM28-203ENST00000593582 HFEQ30201 348 aa13□□□□□ -0.33
TRIM28-203ENST00000593582 CCDC92Q53HC0 331 aaPredicted RBP13□□□□□ -0.33
TRIM28-203ENST00000593582 TMEM255AQ5JRV8 349 aa13□□□□□ -0.33
TRIM28-203ENST00000593582 USP51Q70EK9 711 aa13□□□□□ -0.33
TRIM28-203ENST00000593582 OR52E2Q8NGJ4 325 aa13□□□□□ -0.33
TRIM28-203ENST00000593582 CLDND2Q8NHS1 167 aa13□□□□□ -0.33
TRIM28-203ENST00000593582 SLC7A6Q92536 515 aa13□□□□□ -0.33
TRIM28-203ENST00000593582 CCDC124Q96CT7 223 aaKnown RBP13□□□□□ -0.33
TRIM28-203ENST00000593582 ASB9Q96DX5 294 aa13□□□□□ -0.33
TRIM28-203ENST00000593582 ELMOD3Q96FG2 381 aa13□□□□□ -0.33
TRIM28-203ENST00000593582 LRGUKQ96M69 825 aa13□□□□□ -0.33
TRIM28-203ENST00000593582 DIRC2Q96SL1 478 aa13□□□□□ -0.33
TRIM28-203ENST00000593582 EGLN1Q9GZT9 426 aa13□□□□□ -0.33
TRIM28-203ENST00000593582 HDHD2Q9H0R4 259 aa13□□□□□ -0.33
TRIM28-203ENST00000593582 EGLN3Q9H6Z9 239 aa13□□□□□ -0.33
TRIM28-203ENST00000593582 REEP1Q9H902 201 aa13□□□□□ -0.33
TRIM28-203ENST00000593582 SAMHD1Q9Y3Z3 626 aaKnown RBP13□□□□□ -0.33
TRIM28-203ENST00000593582 CDH10Q9Y6N8 788 aa13□□□□□ -0.33
TRIM28-203ENST00000593582 ATRQ13535 2644 aa12.99□□□□□ -0.33
TRIM28-203ENST00000593582 OR6C68A6NDL8 312 aa12.99□□□□□ -0.33
TRIM28-203ENST00000593582 ZSCAN5BA6NJL1 495 aa12.99□□□□□ -0.33
TRIM28-203ENST00000593582 B4DSR2 109 aa12.99□□□□□ -0.33
TRIM28-203ENST00000593582 GASTP01350 101 aa12.99□□□□□ -0.33
TRIM28-203ENST00000593582 HLA-DQA2P01906 255 aa12.99□□□□□ -0.33
TRIM28-203ENST00000593582 TFP02787 698 aa12.99□□□□□ -0.33
TRIM28-203ENST00000593582 SRD5A1P18405 259 aa12.99□□□□□ -0.33
TRIM28-203ENST00000593582 RGS6P49758 472 aa12.99□□□□□ -0.33
TRIM28-203ENST00000593582 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.99□□□□□ -0.33
TRIM28-203ENST00000593582 COX10Q12887 443 aa12.99□□□□□ -0.33
TRIM28-203ENST00000593582 SLC36A3Q495N2 470 aa12.99□□□□□ -0.33
TRIM28-203ENST00000593582 SLC35F1Q5T1Q4 408 aa12.99□□□□□ -0.33
TRIM28-203ENST00000593582 OR2T5Q6IEZ7 315 aa12.99□□□□□ -0.33
TRIM28-203ENST00000593582 ZNF770Q6IQ21 691 aaPredicted RBP12.99□□□□□ -0.33
TRIM28-203ENST00000593582 ZBTB46Q86UZ6 589 aa12.99□□□□□ -0.33
TRIM28-203ENST00000593582 AQP11Q8NBQ7 271 aa12.99□□□□□ -0.33
TRIM28-203ENST00000593582 SDR9C7Q8NEX9 313 aa12.99□□□□□ -0.33
TRIM28-203ENST00000593582 SLC26A10Q8NG04 563 aa12.99□□□□□ -0.33
TRIM28-203ENST00000593582 OR4C15Q8NGM1 316 aa12.99□□□□□ -0.33
TRIM28-203ENST00000593582 OR2T29Q8NH02 315 aa12.99□□□□□ -0.33
TRIM28-203ENST00000593582 C1orf159Q96HA4 380 aa12.99□□□□□ -0.33
TRIM28-203ENST00000593582 DCLRE1CQ96SD1 692 aaKnown RBP12.99□□□□□ -0.33
TRIM28-203ENST00000593582 MDFIQ99750 246 aa12.99□□□□□ -0.33
TRIM28-203ENST00000593582 COQ7Q99807 217 aa12.99□□□□□ -0.33
TRIM28-203ENST00000593582 CDADC1Q9BWV3 514 aa12.99□□□□□ -0.33
TRIM28-203ENST00000593582 MSL2Q9HCI7 577 aa12.99□□□□□ -0.33
TRIM28-203ENST00000593582 TAS2R1Q9NYW7 299 aa12.99□□□□□ -0.33
TRIM28-203ENST00000593582 IL20Q9NYY1 176 aa12.99□□□□□ -0.33
TRIM28-203ENST00000593582 KLHL21Q9UJP4 597 aa12.99□□□□□ -0.33
TRIM28-203ENST00000593582 STARD10Q9Y365 291 aa12.99□□□□□ -0.33
TRIM28-203ENST00000593582 LHFPL6Q9Y693 200 aa12.99□□□□□ -0.33
TRIM28-203ENST00000593582 U3KQV3 271 aa12.99□□□□□ -0.33
TRIM28-203ENST00000593582 CLDN25C9JDP6 229 aa12.98□□□□□ -0.33
TRIM28-203ENST00000593582 J3QW42 95 aa12.98□□□□□ -0.33
TRIM28-203ENST00000593582 BHLHE40O14503 412 aa12.98□□□□□ -0.33
TRIM28-203ENST00000593582 ADH4P08319 380 aa12.98□□□□□ -0.33
TRIM28-203ENST00000593582 DBHP09172 617 aa12.98□□□□□ -0.33
TRIM28-203ENST00000593582 RAP2AP10114 183 aa12.98□□□□□ -0.33
TRIM28-203ENST00000593582 PCMT1P22061 227 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms