RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 OR6C6A6NF89 314 aa11.8□□□□□ -0.52
APOC1-208ENST00000592535 FAM157AC9JC47 383 aa11.8□□□□□ -0.52
APOC1-208ENST00000592535 RER1O15258 196 aa11.8□□□□□ -0.52
APOC1-208ENST00000592535 RENP00797 406 aa11.8□□□□□ -0.52
APOC1-208ENST00000592535 HIST1H1CP16403 213 aaKnown RBP11.8□□□□□ -0.52
APOC1-208ENST00000592535 SRD5A1P18405 259 aa11.8□□□□□ -0.52
APOC1-208ENST00000592535 CRABP1P29762 137 aa11.8□□□□□ -0.52
APOC1-208ENST00000592535 MVKQ03426 396 aa11.8□□□□□ -0.52
APOC1-208ENST00000592535 TSPAN31Q12999 210 aa11.8□□□□□ -0.52
APOC1-208ENST00000592535 PSG7Q13046 419 aa11.8□□□□□ -0.52
APOC1-208ENST00000592535 FAM209AQ5JX71 171 aa11.8□□□□□ -0.52
APOC1-208ENST00000592535 DNM1P34Q6PK57 102 aa11.8□□□□□ -0.52
APOC1-208ENST00000592535 ZNF620Q6ZNG0 422 aa11.8□□□□□ -0.52
APOC1-208ENST00000592535 OR6V1Q8N148 313 aa11.8□□□□□ -0.52
APOC1-208ENST00000592535 CCDC197Q8NCU1 140 aa11.8□□□□□ -0.52
APOC1-208ENST00000592535 NPEPL1Q8NDH3 523 aa11.8□□□□□ -0.52
APOC1-208ENST00000592535 OR9Q2Q8NGE9 314 aa11.8□□□□□ -0.52
APOC1-208ENST00000592535 OR1F12Q8NHA8 337 aa11.8□□□□□ -0.52
APOC1-208ENST00000592535 FN3KQ9H479 309 aa11.8□□□□□ -0.52
APOC1-208ENST00000592535 SRA1Q9HD15 236 aaKnown RBP11.8□□□□□ -0.52
APOC1-208ENST00000592535 CYSLTR2Q9NS75 346 aa11.8□□□□□ -0.52
APOC1-208ENST00000592535 TBCCD1Q9NVR7 557 aa11.8□□□□□ -0.52
APOC1-208ENST00000592535 TREM2Q9NZC2 230 aa11.8□□□□□ -0.52
APOC1-208ENST00000592535 KLHL21Q9UJP4 597 aa11.8□□□□□ -0.52
APOC1-208ENST00000592535 B9D1Q9UPM9 204 aa11.8□□□□□ -0.52
APOC1-208ENST00000592535 POLR1DQ9Y2S0 133 aa11.8□□□□□ -0.52
APOC1-208ENST00000592535 LYVE1Q9Y5Y7 322 aa11.8□□□□□ -0.52
APOC1-208ENST00000592535 LHFPL6Q9Y693 200 aa11.8□□□□□ -0.52
APOC1-208ENST00000592535 DYSFO75923 2080 aa11.79□□□□□ -0.52
APOC1-208ENST00000592535 B4DSR2 109 aa11.79□□□□□ -0.52
APOC1-208ENST00000592535 TNFRSF11BO00300 401 aa11.79□□□□□ -0.52
APOC1-208ENST00000592535 TIMM8AO60220 97 aaPredicted RBP11.79□□□□□ -0.52
APOC1-208ENST00000592535 KRT36O76013 467 aa11.79□□□□□ -0.52
APOC1-208ENST00000592535 TFP02787 698 aa11.79□□□□□ -0.52
APOC1-208ENST00000592535 ADH4P08319 380 aa11.79□□□□□ -0.52
APOC1-208ENST00000592535 DBHP09172 617 aa11.79□□□□□ -0.52
APOC1-208ENST00000592535 T-ENOLP0DO92 83 aa11.79□□□□□ -0.52
APOC1-208ENST00000592535 HNF1AP20823 631 aa11.79□□□□□ -0.52
APOC1-208ENST00000592535 GSTM3P21266 225 aa11.79□□□□□ -0.52
APOC1-208ENST00000592535 CALB2P22676 271 aa11.79□□□□□ -0.52
APOC1-208ENST00000592535 MAGEA2P43356 314 aa11.79□□□□□ -0.52
APOC1-208ENST00000592535 HMGA2P52926 109 aa11.79□□□□□ -0.52
APOC1-208ENST00000592535 DVL1P1P54792 670 aaPredicted RBP11.79□□□□□ -0.52
APOC1-208ENST00000592535 LMO4P61968 165 aa11.79□□□□□ -0.52
APOC1-208ENST00000592535 MS4A2Q01362 244 aa11.79□□□□□ -0.52
APOC1-208ENST00000592535 TEKQ02763 1124 aa11.79□□□□□ -0.52
APOC1-208ENST00000592535 PPP1R8Q12972 351 aaKnown RBP11.79□□□□□ -0.52
APOC1-208ENST00000592535 SPRNQ5BIV9 151 aa11.79□□□□□ -0.52
APOC1-208ENST00000592535 MTX3Q5HYI7 312 aa11.79□□□□□ -0.52
APOC1-208ENST00000592535 LCN8Q6JVE9 175 aa11.79□□□□□ -0.52
APOC1-208ENST00000592535 CORO6Q6QEF8 472 aa11.79□□□□□ -0.52
APOC1-208ENST00000592535 DHFR2Q86XF0 187 aa11.79□□□□□ -0.52
APOC1-208ENST00000592535 ARHGAP24Q8N264 748 aa11.79□□□□□ -0.52
APOC1-208ENST00000592535 SDR9C7Q8NEX9 313 aa11.79□□□□□ -0.52
APOC1-208ENST00000592535 OR4C15Q8NGM1 316 aa11.79□□□□□ -0.52
APOC1-208ENST00000592535 BTBD10Q9BSF8 475 aa11.79□□□□□ -0.52
APOC1-208ENST00000592535 EGLN3Q9H6Z9 239 aa11.79□□□□□ -0.52
APOC1-208ENST00000592535 LPAR2Q9HBW0 351 aa11.79□□□□□ -0.52
APOC1-208ENST00000592535 MSL2Q9HCI7 577 aa11.79□□□□□ -0.52
APOC1-208ENST00000592535 RPRD1BQ9NQG5 326 aaKnown RBP11.79□□□□□ -0.52
APOC1-208ENST00000592535 CGGBP1Q9UFW8 167 aaPredicted RBP11.79□□□□□ -0.52
APOC1-208ENST00000592535 TMEFF2Q9UIK5 374 aaPredicted RBP11.79□□□□□ -0.52
APOC1-208ENST00000592535 STARD10Q9Y365 291 aa11.79□□□□□ -0.52
APOC1-208ENST00000592535 OR6C68A6NDL8 312 aa11.78□□□□□ -0.52
APOC1-208ENST00000592535 RNF212BA8MTL3 300 aa11.78□□□□□ -0.52
APOC1-208ENST00000592535 CLDN25C9JDP6 229 aa11.78□□□□□ -0.52
APOC1-208ENST00000592535 PHF1O43189 567 aaPredicted RBP11.78□□□□□ -0.52
APOC1-208ENST00000592535 RRP9O43818 475 aaKnown RBP11.78□□□□□ -0.52
APOC1-208ENST00000592535 NOS3P29474 1203 aa11.78□□□□□ -0.52
APOC1-208ENST00000592535 LIPAP38571 399 aa11.78□□□□□ -0.52
APOC1-208ENST00000592535 ERFP50548 548 aa11.78□□□□□ -0.52
APOC1-208ENST00000592535 HIST1H3AP68431 136 aa11.78□□□□□ -0.52
APOC1-208ENST00000592535 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.78□□□□□ -0.52
APOC1-208ENST00000592535 TRIM25Q14258 630 aaKnown RBP11.78□□□□□ -0.52
APOC1-208ENST00000592535 HFEQ30201 348 aa11.78□□□□□ -0.52
APOC1-208ENST00000592535 CLEC12AQ5QGZ9 265 aa11.78□□□□□ -0.52
APOC1-208ENST00000592535 SLC35F1Q5T1Q4 408 aa11.78□□□□□ -0.52
APOC1-208ENST00000592535 HIST2H3PS2Q5TEC6 136 aa11.78□□□□□ -0.52
APOC1-208ENST00000592535 ZNF770Q6IQ21 691 aaPredicted RBP11.78□□□□□ -0.52
APOC1-208ENST00000592535 PGM2L1Q6PCE3 622 aa11.78□□□□□ -0.52
APOC1-208ENST00000592535 HIST2H3AQ71DI3 136 aa11.78□□□□□ -0.52
APOC1-208ENST00000592535 ZBTB46Q86UZ6 589 aa11.78□□□□□ -0.52
APOC1-208ENST00000592535 SLC26A10Q8NG04 563 aa11.78□□□□□ -0.52
APOC1-208ENST00000592535 OR52E2Q8NGJ4 325 aa11.78□□□□□ -0.52
APOC1-208ENST00000592535 CMBLQ96DG6 245 aa11.78□□□□□ -0.52
APOC1-208ENST00000592535 ELMOD3Q96FG2 381 aa11.78□□□□□ -0.52
APOC1-208ENST00000592535 PLA2G12AQ9BZM1 189 aa11.78□□□□□ -0.52
APOC1-208ENST00000592535 TRIM15Q9C019 465 aa11.78□□□□□ -0.52
APOC1-208ENST00000592535 MUC13Q9H3R2 512 aa11.78□□□□□ -0.52
APOC1-208ENST00000592535 MAGIXQ9H6Y5 334 aa11.78□□□□□ -0.52
APOC1-208ENST00000592535 VNN3Q9NY84 501 aa11.78□□□□□ -0.52
APOC1-208ENST00000592535 ATPIF1Q9UII2 106 aa11.78□□□□□ -0.52
APOC1-208ENST00000592535 PURGQ9UJV8 347 aaKnown RBP11.78□□□□□ -0.52
APOC1-208ENST00000592535 WIPI2Q9Y4P8 454 aa11.78□□□□□ -0.52
APOC1-208ENST00000592535 CDH10Q9Y6N8 788 aa11.78□□□□□ -0.52
APOC1-208ENST00000592535 ATRQ13535 2644 aa11.78□□□□□ -0.52
APOC1-208ENST00000592535 FBN1P35555 2871 aaKnown RBP11.77□□□□□ -0.52
APOC1-208ENST00000592535 CUBNO60494 3623 aa11.77□□□□□ -0.52
APOC1-208ENST00000592535 IDH3BO43837 385 aa11.77□□□□□ -0.53
APOC1-208ENST00000592535 CCNB2O95067 398 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms