RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 RHCEP18577 417 aa8.82□□□□□ -1
VPS4B-207ENST00000591519 CCNOP22674 350 aa8.82□□□□□ -1
VPS4B-207ENST00000591519 TUBG1P23258 451 aa8.82□□□□□ -1
VPS4B-207ENST00000591519 GATA3P23771 443 aa8.82□□□□□ -1
VPS4B-207ENST00000591519 CFPP27918 469 aa8.82□□□□□ -1
VPS4B-207ENST00000591519 GCH1P30793 250 aa8.82□□□□□ -1
VPS4B-207ENST00000591519 GDI2P50395 445 aaKnown RBP8.82□□□□□ -1
VPS4B-207ENST00000591519 HILS1P60008 231 aa8.82□□□□□ -1
VPS4B-207ENST00000591519 RPL27P61353 136 aaKnown RBP8.82□□□□□ -1
VPS4B-207ENST00000591519 PCBD1P61457 104 aa8.82□□□□□ -1
VPS4B-207ENST00000591519 FHL1Q13642 323 aa8.82□□□□□ -1
VPS4B-207ENST00000591519 TRIM25Q14258 630 aaKnown RBP8.82□□□□□ -1
VPS4B-207ENST00000591519 SGCAQ16586 387 aa8.82□□□□□ -1
VPS4B-207ENST00000591519 TSTQ16762 297 aaKnown RBP8.82□□□□□ -1
VPS4B-207ENST00000591519 ANKDD1AQ495B1 522 aa8.82□□□□□ -1
VPS4B-207ENST00000591519 SPATS1Q496A3 300 aa8.82□□□□□ -1
VPS4B-207ENST00000591519 ALG10Q5BKT4 473 aa8.82□□□□□ -1
VPS4B-207ENST00000591519 AVPI1Q5T686 147 aa8.82□□□□□ -1
VPS4B-207ENST00000591519 FAM205BPQ63HN1 556 aa8.82□□□□□ -1
VPS4B-207ENST00000591519 SHQ1Q6PI26 577 aaKnown RBP8.82□□□□□ -1
VPS4B-207ENST00000591519 ZDHHC21Q8IVQ6 265 aa8.82□□□□□ -1
VPS4B-207ENST00000591519 OR4M2Q8NGB6 313 aa8.82□□□□□ -1
VPS4B-207ENST00000591519 OR13C2Q8NGS9 318 aa8.82□□□□□ -1
VPS4B-207ENST00000591519 OR51A7Q8NH64 312 aa8.82□□□□□ -1
VPS4B-207ENST00000591519 AKR7LQ8NHP1 331 aa8.82□□□□□ -1
VPS4B-207ENST00000591519 ACOT11Q8WXI4 607 aaPredicted RBP8.82□□□□□ -1
VPS4B-207ENST00000591519 GTF3AQ92664 365 aaKnown RBP8.82□□□□□ -1
VPS4B-207ENST00000591519 SLC7A6OSQ96CW6 309 aaPredicted RBP8.82□□□□□ -1
VPS4B-207ENST00000591519 ELMOD3Q96FG2 381 aa8.82□□□□□ -1
VPS4B-207ENST00000591519 TIMD4Q96H15 378 aa8.82□□□□□ -1
VPS4B-207ENST00000591519 FAM46AQ96IP4 442 aaKnown RBP8.82□□□□□ -1
VPS4B-207ENST00000591519 DIRC2Q96SL1 478 aa8.82□□□□□ -1
VPS4B-207ENST00000591519 BTBD10Q9BSF8 475 aa8.82□□□□□ -1
VPS4B-207ENST00000591519 OR2H1Q9GZK4 316 aa8.82□□□□□ -1
VPS4B-207ENST00000591519 WNT5BQ9H1J7 359 aa8.82□□□□□ -1
VPS4B-207ENST00000591519 TUBG2Q9NRH3 451 aa8.82□□□□□ -1
VPS4B-207ENST00000591519 CGGBP1Q9UFW8 167 aaPredicted RBP8.82□□□□□ -1
VPS4B-207ENST00000591519 ZDHHC8Q9ULC8 765 aa8.82□□□□□ -1
VPS4B-207ENST00000591519 CACNG2Q9Y698 323 aa8.82□□□□□ -1
VPS4B-207ENST00000591519 DYSFO75923 2080 aa8.81□□□□□ -1
VPS4B-207ENST00000591519 TENM1Q9UKZ4 2725 aa8.81□□□□□ -1
VPS4B-207ENST00000591519 PPIAL4EA0A075B759 164 aa8.81□□□□□ -1
VPS4B-207ENST00000591519 LOC105371242A0A075B767 164 aa8.81□□□□□ -1
VPS4B-207ENST00000591519 PPIAL4CA0A0B4J2A2 164 aa8.81□□□□□ -1
VPS4B-207ENST00000591519 TCRBV5S2A0A599 114 aa8.81□□□□□ -1
VPS4B-207ENST00000591519 A6NIZ1 184 aa8.81□□□□□ -1
VPS4B-207ENST00000591519 PPIAL4DF5H284 164 aa8.81□□□□□ -1
VPS4B-207ENST00000591519 TPD52L2O43399 206 aaKnown RBP8.81□□□□□ -1
VPS4B-207ENST00000591519 SPRY3O43610 288 aa8.81□□□□□ -1
VPS4B-207ENST00000591519 GADD45GO95257 159 aa8.81□□□□□ -1
VPS4B-207ENST00000591519 NGFP01138 241 aa8.81□□□□□ -1
VPS4B-207ENST00000591519 PPIAL4FP0DN26 164 aa8.81□□□□□ -1
VPS4B-207ENST00000591519 COX5BP10606 129 aa8.81□□□□□ -1
VPS4B-207ENST00000591519 EPHA1P21709 976 aa8.81□□□□□ -1
VPS4B-207ENST00000591519 LAP3P28838 519 aa8.81□□□□□ -1
VPS4B-207ENST00000591519 RRM2P31350 389 aa8.81□□□□□ -1
VPS4B-207ENST00000591519 MPV17P39210 176 aa8.81□□□□□ -1
VPS4B-207ENST00000591519 GUCA1AP43080 201 aaPredicted RBP8.81□□□□□ -1
VPS4B-207ENST00000591519 CTXN1P60606 82 aa8.81□□□□□ -1
VPS4B-207ENST00000591519 RAP1BP61224 184 aa8.81□□□□□ -1
VPS4B-207ENST00000591519 RAP1AP62834 184 aa8.81□□□□□ -1
VPS4B-207ENST00000591519 ERVK-25P63136 954 aa8.81□□□□□ -1
VPS4B-207ENST00000591519 PRKCDQ05655 676 aa8.81□□□□□ -1
VPS4B-207ENST00000591519 FMODQ06828 376 aa8.81□□□□□ -1
VPS4B-207ENST00000591519 SLC3A1Q07837 685 aa8.81□□□□□ -1
VPS4B-207ENST00000591519 PPP1R8Q12972 351 aaKnown RBP8.81□□□□□ -1
VPS4B-207ENST00000591519 BNIP1Q12981 228 aa8.81□□□□□ -1
VPS4B-207ENST00000591519 SEC23BQ15437 767 aa8.81□□□□□ -1
VPS4B-207ENST00000591519 DNAL1Q4LDG9 190 aa8.81□□□□□ -1
VPS4B-207ENST00000591519 MBOAT2Q6ZWT7 520 aa8.81□□□□□ -1
VPS4B-207ENST00000591519 C1QL2Q7Z5L3 287 aa8.81□□□□□ -1
VPS4B-207ENST00000591519 OAFQ86UD1 273 aa8.81□□□□□ -1
VPS4B-207ENST00000591519 RNF113BQ8IZP6 322 aaKnown RBP8.81□□□□□ -1
VPS4B-207ENST00000591519 ARHGAP24Q8N264 748 aa8.81□□□□□ -1
VPS4B-207ENST00000591519 ICA1LQ8NDH6 482 aa8.81□□□□□ -1
VPS4B-207ENST00000591519 SLC25A40Q8TBP6 338 aa8.81□□□□□ -1
VPS4B-207ENST00000591519 SLC7A13Q8TCU3 470 aa8.81□□□□□ -1
VPS4B-207ENST00000591519 IPCEF1Q8WWN9 437 aaPredicted RBP8.81□□□□□ -1
VPS4B-207ENST00000591519 CCL17Q92583 94 aa8.81□□□□□ -1
VPS4B-207ENST00000591519 NSMAFQ92636 917 aa8.81□□□□□ -1
VPS4B-207ENST00000591519 C4orf45Q96LM5 186 aa8.81□□□□□ -1
VPS4B-207ENST00000591519 JMJD8Q96S16 334 aa8.81□□□□□ -1
VPS4B-207ENST00000591519 OR2J1Q9GZK6 312 aa8.81□□□□□ -1
VPS4B-207ENST00000591519 EGLN1Q9GZT9 426 aa8.81□□□□□ -1
VPS4B-207ENST00000591519 C1orf21Q9H246 121 aa8.81□□□□□ -1
VPS4B-207ENST00000591519 ELOVL3Q9HB03 270 aa8.81□□□□□ -1
VPS4B-207ENST00000591519 TBCCD1Q9NVR7 557 aa8.81□□□□□ -1
VPS4B-207ENST00000591519 AURKCQ9UQB9 309 aa8.81□□□□□ -1
VPS4B-207ENST00000591519 A0A1W2PRQ8 180 aa8.8□□□□□ -1
VPS4B-207ENST00000591519 PLSCR5A0PG75 271 aa8.8□□□□□ -1
VPS4B-207ENST00000591519 ZSCAN5BA6NJL1 495 aa8.8□□□□□ -1
VPS4B-207ENST00000591519 C12orf71A8MTZ7 269 aa8.8□□□□□ -1
VPS4B-207ENST00000591519 TRIM77I1YAP6 450 aa8.8□□□□□ -1
VPS4B-207ENST00000591519 CDC42EP2O14613 210 aa8.8□□□□□ -1
VPS4B-207ENST00000591519 AHCYL1O43865 530 aa8.8□□□□□ -1
VPS4B-207ENST00000591519 DNAJC8O75937 253 aaPredicted RBP8.8□□□□□ -1
VPS4B-207ENST00000591519 FSHBP01225 129 aa8.8□□□□□ -1
VPS4B-207ENST00000591519 RPL4P36578 427 aaKnown RBP8.8□□□□□ -1
VPS4B-207ENST00000591519 LIMS1P48059 325 aa8.8□□□□□ -1
VPS4B-207ENST00000591519 ARHGDIAP52565 204 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms