RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 LRRC28Q86X40 367 aaPredicted RBP18.34■□□□□ 0.53
DDX39A-215ENST00000590696 DEFB108BQ8NET1 73 aa18.34■□□□□ 0.53
DDX39A-215ENST00000590696 SGMS2Q8NHU3 365 aa18.34■□□□□ 0.53
DDX39A-215ENST00000590696 ITLN1Q8WWA0 313 aa18.34■□□□□ 0.53
DDX39A-215ENST00000590696 SLC7A6Q92536 515 aa18.34■□□□□ 0.53
DDX39A-215ENST00000590696 POP5Q969H6 163 aaKnown RBP18.34■□□□□ 0.53
DDX39A-215ENST00000590696 HAVCR1Q96D42 359 aa18.34■□□□□ 0.53
DDX39A-215ENST00000590696 HSH2DQ96JZ2 352 aa18.34■□□□□ 0.53
DDX39A-215ENST00000590696 DDX28Q9NUL7 540 aaKnown RBP18.34■□□□□ 0.53
DDX39A-215ENST00000590696 PLEK2Q9NYT0 353 aa18.34■□□□□ 0.53
DDX39A-215ENST00000590696 IL19Q9UHD0 177 aa18.34■□□□□ 0.53
DDX39A-215ENST00000590696 TRAPPC2LH3BP13 241 aa18.33■□□□□ 0.52
DDX39A-215ENST00000590696 SLC22A2O15244 555 aa18.33■□□□□ 0.52
DDX39A-215ENST00000590696 SLC6A9P48067 706 aa18.33■□□□□ 0.52
DDX39A-215ENST00000590696 SEC61A1P61619 476 aaKnown RBP18.33■□□□□ 0.52
DDX39A-215ENST00000590696 BTG1P62324 171 aa18.33■□□□□ 0.52
DDX39A-215ENST00000590696 AQP6Q13520 282 aa18.33■□□□□ 0.52
DDX39A-215ENST00000590696 AWAT1Q58HT5 328 aa18.33■□□□□ 0.52
DDX39A-215ENST00000590696 RP9Q8TA86 221 aaKnown RBP18.33■□□□□ 0.52
DDX39A-215ENST00000590696 PTP4A1Q93096 173 aa18.33■□□□□ 0.52
DDX39A-215ENST00000590696 RASD2Q96D21 266 aa18.33■□□□□ 0.52
DDX39A-215ENST00000590696 RERGLQ9H628 205 aa18.33■□□□□ 0.52
DDX39A-215ENST00000590696 PPP1R3CQ9UQK1 317 aa18.33■□□□□ 0.52
DDX39A-215ENST00000590696 POLR3KQ9Y2Y1 108 aaPredicted RBP18.33■□□□□ 0.52
DDX39A-215ENST00000590696 AUP1Q9Y679 476 aa18.33■□□□□ 0.52
DDX39A-215ENST00000590696 SURF4O15260 269 aa18.32■□□□□ 0.52
DDX39A-215ENST00000590696 SLC16A7O60669 478 aa18.32■□□□□ 0.52
DDX39A-215ENST00000590696 SERPINA1P01009 418 aa18.32■□□□□ 0.52
DDX39A-215ENST00000590696 ERFP50548 548 aa18.32■□□□□ 0.52
DDX39A-215ENST00000590696 ZNF154Q13106 437 aa18.32■□□□□ 0.52
DDX39A-215ENST00000590696 ZMYND11Q15326 602 aa18.32■□□□□ 0.52
DDX39A-215ENST00000590696 ARMCX4Q5H9R4 360 aa18.32■□□□□ 0.52
DDX39A-215ENST00000590696 RBMS3Q6XE24 437 aaKnown RBP18.32■□□□□ 0.52
DDX39A-215ENST00000590696 SIGLECL1Q8N7X8 197 aa18.32■□□□□ 0.52
DDX39A-215ENST00000590696 FAM46AQ96IP4 442 aaKnown RBP18.32■□□□□ 0.52
DDX39A-215ENST00000590696 COG8Q96MW5 612 aa18.32■□□□□ 0.52
DDX39A-215ENST00000590696 OR2V2Q96R30 315 aa18.32■□□□□ 0.52
DDX39A-215ENST00000590696 SIGLEC11Q96RL6 698 aa18.32■□□□□ 0.52
DDX39A-215ENST00000590696 NDEL1Q9GZM8 345 aa18.32■□□□□ 0.52
DDX39A-215ENST00000590696 SYT4Q9H2B2 425 aa18.32■□□□□ 0.52
DDX39A-215ENST00000590696 ANKRD19PQ9H560 264 aa18.32■□□□□ 0.52
DDX39A-215ENST00000590696 NMNAT1Q9HAN9 279 aaPredicted RBP18.32■□□□□ 0.52
DDX39A-215ENST00000590696 ASH2LQ9UBL3 628 aa18.32■□□□□ 0.52
DDX39A-215ENST00000590696 TMEM5Q9Y2B1 443 aa18.32■□□□□ 0.52
DDX39A-215ENST00000590696 COA3Q9Y2R0 106 aaPredicted RBP18.32■□□□□ 0.52
DDX39A-215ENST00000590696 NME4O00746 187 aa18.31■□□□□ 0.52
DDX39A-215ENST00000590696 PTP4A3O75365 173 aa18.31■□□□□ 0.52
DDX39A-215ENST00000590696 KHDRBS3O75525 346 aaKnown RBP18.31■□□□□ 0.52
DDX39A-215ENST00000590696 ZNF12P17014 697 aa18.31■□□□□ 0.52
DDX39A-215ENST00000590696 GUCY1A3Q02108 690 aa18.31■□□□□ 0.52
DDX39A-215ENST00000590696 KRR1Q13601 381 aaKnown RBP18.31■□□□□ 0.52
DDX39A-215ENST00000590696 CCDC92Q53HC0 331 aaPredicted RBP18.31■□□□□ 0.52
DDX39A-215ENST00000590696 TSEN54Q7Z6J9 526 aaKnown RBP18.31■□□□□ 0.52
DDX39A-215ENST00000590696 CYP4Z1Q86W10 505 aa18.31■□□□□ 0.52
DDX39A-215ENST00000590696 OR5AS1Q8N127 324 aa18.31■□□□□ 0.52
DDX39A-215ENST00000590696 OR1F12Q8NHA8 337 aa18.31■□□□□ 0.52
DDX39A-215ENST00000590696 SLC7A13Q8TCU3 470 aa18.31■□□□□ 0.52
DDX39A-215ENST00000590696 NUP50Q9UKX7 468 aa18.31■□□□□ 0.52
DDX39A-215ENST00000590696 INSIG2Q9Y5U4 225 aa18.31■□□□□ 0.52
DDX39A-215ENST00000590696 ENPP4Q9Y6X5 453 aa18.31■□□□□ 0.52
DDX39A-215ENST00000590696 OR6C6A6NF89 314 aa18.3■□□□□ 0.52
DDX39A-215ENST00000590696 F5H0A9 414 aaPredicted RBP18.3■□□□□ 0.52
DDX39A-215ENST00000590696 IMPA2O14732 288 aa18.3■□□□□ 0.52
DDX39A-215ENST00000590696 NDUFB2O95178 105 aa18.3■□□□□ 0.52
DDX39A-215ENST00000590696 COX4I1P13073 169 aa18.3■□□□□ 0.52
DDX39A-215ENST00000590696 RAC2P15153 192 aa18.3■□□□□ 0.52
DDX39A-215ENST00000590696 SDHAP31040 664 aa18.3■□□□□ 0.52
DDX39A-215ENST00000590696 SLC7A2P52569 658 aa18.3■□□□□ 0.52
DDX39A-215ENST00000590696 LSM6P62312 80 aaKnown RBP18.3■□□□□ 0.52
DDX39A-215ENST00000590696 KLF17Q5JT82 389 aaPredicted RBP18.3■□□□□ 0.52
DDX39A-215ENST00000590696 GLB1L2Q8IW92 636 aa18.3■□□□□ 0.52
DDX39A-215ENST00000590696 ATG16L2Q8NAA4 619 aa18.3■□□□□ 0.52
DDX39A-215ENST00000590696 HOPXQ9BPY8 73 aaPredicted RBP18.3■□□□□ 0.52
DDX39A-215ENST00000590696 NRIP3Q9NQ35 241 aa18.3■□□□□ 0.52
DDX39A-215ENST00000590696 ZNF69Q9UC07 566 aa18.3■□□□□ 0.52
DDX39A-215ENST00000590696 IL20RAQ9UHF4 553 aa18.3■□□□□ 0.52
DDX39A-215ENST00000590696 SIGLEC7Q9Y286 467 aa18.3■□□□□ 0.52
DDX39A-215ENST00000590696 A8MXK9 166 aa18.29■□□□□ 0.52
DDX39A-215ENST00000590696 TMEM178BH3BS89 294 aa18.29■□□□□ 0.52
DDX39A-215ENST00000590696 SOCS2O14508 198 aa18.29■□□□□ 0.52
DDX39A-215ENST00000590696 DBHP09172 617 aa18.29■□□□□ 0.52
DDX39A-215ENST00000590696 MDH2P40926 338 aaKnown RBP18.29■□□□□ 0.52
DDX39A-215ENST00000590696 GSK3BP49841 420 aa18.29■□□□□ 0.52
DDX39A-215ENST00000590696 HLXQ14774 488 aaPredicted RBP18.29■□□□□ 0.52
DDX39A-215ENST00000590696 TUSC1Q2TAM9 212 aa18.29■□□□□ 0.52
DDX39A-215ENST00000590696 ESCO2Q56NI9 601 aa18.29■□□□□ 0.52
DDX39A-215ENST00000590696 GPR139Q6DWJ6 353 aa18.29■□□□□ 0.52
DDX39A-215ENST00000590696 FAM162AQ96A26 154 aa18.29■□□□□ 0.52
DDX39A-215ENST00000590696 GPA33Q99795 319 aa18.29■□□□□ 0.52
DDX39A-215ENST00000590696 MRI1Q9BV20 369 aa18.29■□□□□ 0.52
DDX39A-215ENST00000590696 NUAK2Q9H093 628 aa18.29■□□□□ 0.52
DDX39A-215ENST00000590696 GCM1Q9NP62 436 aa18.29■□□□□ 0.52
DDX39A-215ENST00000590696 PTTG3PQ9NZH4 202 aa18.29■□□□□ 0.52
DDX39A-215ENST00000590696 VSX1Q9NZR4 365 aaPredicted RBP18.29■□□□□ 0.52
DDX39A-215ENST00000590696 IER3IP1Q9Y5U9 82 aa18.29■□□□□ 0.52
DDX39A-215ENST00000590696 RER1O15258 196 aa18.28■□□□□ 0.52
DDX39A-215ENST00000590696 H1F0P07305 194 aaKnown RBP18.28■□□□□ 0.52
DDX39A-215ENST00000590696 HKR1P10072 659 aa18.28■□□□□ 0.52
DDX39A-215ENST00000590696 NCK1P16333 377 aa18.28■□□□□ 0.52
DDX39A-215ENST00000590696 RGS6P49758 472 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms