RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 CYR61O00622 381 aa15.48■□□□□ 0.07
SMARCA4-215ENST00000590574 SLC35A1P78382 337 aa15.48■□□□□ 0.07
SMARCA4-215ENST00000590574 NPSR1Q6W5P4 371 aa15.48■□□□□ 0.07
SMARCA4-215ENST00000590574 TMEM52Q8NDY8 209 aa15.48■□□□□ 0.07
SMARCA4-215ENST00000590574 TINAGL1Q9GZM7 467 aaPredicted RBP15.48■□□□□ 0.07
SMARCA4-215ENST00000590574 KLHL13Q9P2N7 655 aa15.48■□□□□ 0.07
SMARCA4-215ENST00000590574 FBXO4Q9UKT5 387 aa15.48■□□□□ 0.07
SMARCA4-215ENST00000590574 G3V3Y1 287 aa15.48■□□□□ 0.07
SMARCA4-215ENST00000590574 HRKO00198 91 aa15.48■□□□□ 0.07
SMARCA4-215ENST00000590574 CTDSPLO15194 276 aa15.48■□□□□ 0.07
SMARCA4-215ENST00000590574 ALOX12BO75342 701 aa15.48■□□□□ 0.07
SMARCA4-215ENST00000590574 CHRM2P08172 466 aa15.48■□□□□ 0.07
SMARCA4-215ENST00000590574 HRH1P35367 487 aa15.48■□□□□ 0.07
SMARCA4-215ENST00000590574 PLCXD3Q63HM9 321 aa15.48■□□□□ 0.07
SMARCA4-215ENST00000590574 CBLN3Q6UW01 205 aa15.48■□□□□ 0.07
SMARCA4-215ENST00000590574 ACOT7LQ6ZUV0 252 aa15.48■□□□□ 0.07
SMARCA4-215ENST00000590574 PIGTQ969N2 578 aa15.48■□□□□ 0.07
SMARCA4-215ENST00000590574 MTFP1Q9UDX5 166 aa15.48■□□□□ 0.07
SMARCA4-215ENST00000590574 CHRDL2Q6WN34 429 aa15.47■□□□□ 0.07
SMARCA4-215ENST00000590574 RFLNBQ8N5W9 214 aa15.47■□□□□ 0.07
SMARCA4-215ENST00000590574 OR4S1Q8NGB4 309 aa15.47■□□□□ 0.07
SMARCA4-215ENST00000590574 OR10R2Q8NGX6 335 aa15.47■□□□□ 0.07
SMARCA4-215ENST00000590574 NUDT9Q9BW91 350 aa15.47■□□□□ 0.07
SMARCA4-215ENST00000590574 MRM2Q9UI43 246 aaKnown RBP15.47■□□□□ 0.07
SMARCA4-215ENST00000590574 KNL1Q8NG31 2342 aa15.47■□□□□ 0.07
SMARCA4-215ENST00000590574 CTAG2O75638 210 aa15.47■□□□□ 0.07
SMARCA4-215ENST00000590574 HPXP02790 462 aa15.47■□□□□ 0.07
SMARCA4-215ENST00000590574 SERPINF1P36955 418 aa15.47■□□□□ 0.07
SMARCA4-215ENST00000590574 ZNF362Q5T0B9 420 aaPredicted RBP15.47■□□□□ 0.07
SMARCA4-215ENST00000590574 CD200R1LQ6Q8B3 271 aa15.47■□□□□ 0.07
SMARCA4-215ENST00000590574 MUC20Q8N307 709 aaPredicted RBP15.47■□□□□ 0.07
SMARCA4-215ENST00000590574 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.47■□□□□ 0.07
SMARCA4-215ENST00000590574 WWTR1Q9GZV5 400 aa15.47■□□□□ 0.07
SMARCA4-215ENST00000590574 TMEM272A0A1B0GTI8 110 aa15.47■□□□□ 0.07
SMARCA4-215ENST00000590574 JMJD7P0C870 316 aa15.47■□□□□ 0.07
SMARCA4-215ENST00000590574 THBS2P35442 1172 aa15.47■□□□□ 0.07
SMARCA4-215ENST00000590574 MFGE8Q08431 387 aaPredicted RBP15.47■□□□□ 0.07
SMARCA4-215ENST00000590574 C4orf45Q96LM5 186 aa15.47■□□□□ 0.07
SMARCA4-215ENST00000590574 NICN1Q9BSH3 213 aa15.47■□□□□ 0.07
SMARCA4-215ENST00000590574 CRISPLD2Q9H0B8 497 aa15.47■□□□□ 0.07
SMARCA4-215ENST00000590574 PCDHGA1Q9Y5H4 931 aa15.47■□□□□ 0.07
SMARCA4-215ENST00000590574 SNRNP70P08621 437 aaKnown RBP15.47■□□□□ 0.07
SMARCA4-215ENST00000590574 SNTB1Q13884 538 aaKnown RBP15.47■□□□□ 0.07
SMARCA4-215ENST00000590574 SPICQ8N5J4 248 aa15.47■□□□□ 0.07
SMARCA4-215ENST00000590574 TMEM229BQ8NBD8 167 aa15.47■□□□□ 0.07
SMARCA4-215ENST00000590574 GPBAR1Q8TDU6 330 aa15.47■□□□□ 0.07
SMARCA4-215ENST00000590574 PIGMQ9H3S5 423 aa15.47■□□□□ 0.07
SMARCA4-215ENST00000590574 ST6GALNAC2Q9UJ37 374 aa15.47■□□□□ 0.07
SMARCA4-215ENST00000590574 SSBP1Q04837 148 aaKnown RBP15.46■□□□□ 0.07
SMARCA4-215ENST00000590574 KLF9Q13886 244 aaPredicted RBP15.46■□□□□ 0.07
SMARCA4-215ENST00000590574 ZNF626Q68DY1 528 aa15.46■□□□□ 0.07
SMARCA4-215ENST00000590574 BEND4Q6ZU67 534 aa15.46■□□□□ 0.07
SMARCA4-215ENST00000590574 MOB3CQ70IA8 216 aa15.46■□□□□ 0.07
SMARCA4-215ENST00000590574 NKX6-2Q9C056 277 aaPredicted RBP15.46■□□□□ 0.07
SMARCA4-215ENST00000590574 SULT1A3P0DMM9 295 aa15.46■□□□□ 0.07
SMARCA4-215ENST00000590574 SULT1A4P0DMN0 295 aa15.46■□□□□ 0.07
SMARCA4-215ENST00000590574 PNLIPRP2P54317 469 aa15.46■□□□□ 0.07
SMARCA4-215ENST00000590574 HLXQ14774 488 aaPredicted RBP15.46■□□□□ 0.07
SMARCA4-215ENST00000590574 PBOV1Q9GZY1 135 aa15.46■□□□□ 0.07
SMARCA4-215ENST00000590574 ASH2LQ9UBL3 628 aa15.46■□□□□ 0.07
SMARCA4-215ENST00000590574 OR6C76A6NM76 312 aa15.46■□□□□ 0.07
SMARCA4-215ENST00000590574 EPHA1P21709 976 aa15.46■□□□□ 0.07
SMARCA4-215ENST00000590574 PWWP2BQ6NUJ5 590 aa15.46■□□□□ 0.07
SMARCA4-215ENST00000590574 LSMEM1Q8N8F7 131 aa15.46■□□□□ 0.07
SMARCA4-215ENST00000590574 PIGCQ92535 297 aa15.46■□□□□ 0.07
SMARCA4-215ENST00000590574 SCMH1Q96GD3 660 aa15.46■□□□□ 0.07
SMARCA4-215ENST00000590574 CCDC86Q9H6F5 360 aaKnown RBP15.46■□□□□ 0.07
SMARCA4-215ENST00000590574 CHD5Q8TDI0 1954 aa15.46■□□□□ 0.07
SMARCA4-215ENST00000590574 PCM1Q15154 2024 aa15.46■□□□□ 0.07
SMARCA4-215ENST00000590574 ADRB1P08588 477 aa15.46■□□□□ 0.06
SMARCA4-215ENST00000590574 DBHP09172 617 aa15.46■□□□□ 0.06
SMARCA4-215ENST00000590574 MGMTP16455 207 aa15.46■□□□□ 0.06
SMARCA4-215ENST00000590574 FOLR3P41439 243 aa15.46■□□□□ 0.06
SMARCA4-215ENST00000590574 ANKRD16Q6P6B7 361 aa15.46■□□□□ 0.06
SMARCA4-215ENST00000590574 OPN5Q6U736 354 aa15.46■□□□□ 0.06
SMARCA4-215ENST00000590574 ST8SIA2Q92186 375 aa15.46■□□□□ 0.06
SMARCA4-215ENST00000590574 C10orf90Q96M02 699 aa15.46■□□□□ 0.06
SMARCA4-215ENST00000590574 KCNJ15Q99712 375 aa15.46■□□□□ 0.06
SMARCA4-215ENST00000590574 KCNK15Q9H427 330 aa15.46■□□□□ 0.06
SMARCA4-215ENST00000590574 EXOSC3Q9NQT5 275 aaKnown RBP15.46■□□□□ 0.06
SMARCA4-215ENST00000590574 BIN3Q9NQY0 253 aa15.46■□□□□ 0.06
SMARCA4-215ENST00000590574 PTP4A3O75365 173 aa15.45■□□□□ 0.06
SMARCA4-215ENST00000590574 MFAP5Q13361 173 aa15.45■□□□□ 0.06
SMARCA4-215ENST00000590574 CLPPQ16740 277 aaPredicted RBP15.45■□□□□ 0.06
SMARCA4-215ENST00000590574 IAH1Q2TAA2 248 aaPredicted RBP15.45■□□□□ 0.06
SMARCA4-215ENST00000590574 ZNF100Q8IYN0 542 aa15.45■□□□□ 0.06
SMARCA4-215ENST00000590574 VSTM2LQ96N03 204 aa15.45■□□□□ 0.06
SMARCA4-215ENST00000590574 GABRG3Q99928 467 aa15.45■□□□□ 0.06
SMARCA4-215ENST00000590574 KCNJ16Q9NPI9 418 aa15.45■□□□□ 0.06
SMARCA4-215ENST00000590574 B4GALT7Q9UBV7 327 aa15.45■□□□□ 0.06
SMARCA4-215ENST00000590574 TMEM92Q6UXU6 159 aa15.45■□□□□ 0.06
SMARCA4-215ENST00000590574 LYG2Q86SG7 212 aa15.45■□□□□ 0.06
SMARCA4-215ENST00000590574 CCDC54Q8NEL0 328 aa15.45■□□□□ 0.06
SMARCA4-215ENST00000590574 PPP1R1CQ8WVI7 109 aa15.45■□□□□ 0.06
SMARCA4-215ENST00000590574 DUSP23Q9BVJ7 150 aa15.45■□□□□ 0.06
SMARCA4-215ENST00000590574 FRRS1LQ9P0K9 344 aa15.45■□□□□ 0.06
SMARCA4-215ENST00000590574 TNFSF14O43557 240 aa15.45■□□□□ 0.06
SMARCA4-215ENST00000590574 PEA15Q15121 130 aa15.45■□□□□ 0.06
SMARCA4-215ENST00000590574 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.45■□□□□ 0.066e-8■■■■■ 50.8
SMARCA4-215ENST00000590574 AKR1C8PQ5T2L2 129 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms