RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 CENPOQ9BU64 300 aa15.31■□□□□ 0.04
CXXC1-212ENST00000589940 EXOSC4Q9NPD3 245 aaKnown RBP15.31■□□□□ 0.04
CXXC1-212ENST00000589940 PNRC2Q9NPJ4 139 aaKnown RBP15.31■□□□□ 0.04
CXXC1-212ENST00000589940 SSR3Q9UNL2 185 aa15.31■□□□□ 0.04
CXXC1-212ENST00000589940 TOXO94900 526 aa15.31■□□□□ 0.04
CXXC1-212ENST00000589940 CRHP06850 196 aa15.31■□□□□ 0.04
CXXC1-212ENST00000589940 MPGP29372 298 aa15.31■□□□□ 0.04
CXXC1-212ENST00000589940 FOXG1P55316 489 aaPredicted RBP15.31■□□□□ 0.04
CXXC1-212ENST00000589940 ALKBH1Q13686 389 aaKnown RBP15.31■□□□□ 0.04
CXXC1-212ENST00000589940 LY6DQ14210 128 aa15.31■□□□□ 0.04
CXXC1-212ENST00000589940 TRAM1Q15629 374 aa15.31■□□□□ 0.04
CXXC1-212ENST00000589940 C9orf135Q5VTT2 229 aa15.31■□□□□ 0.04
CXXC1-212ENST00000589940 FDX2Q6P4F2 183 aa15.31■□□□□ 0.04
CXXC1-212ENST00000589940 KLHL24Q6TFL4 600 aa15.31■□□□□ 0.04
CXXC1-212ENST00000589940 DOLPP1Q86YN1 238 aa15.31■□□□□ 0.04
CXXC1-212ENST00000589940 TRMT61AQ96FX7 289 aaKnown RBP15.31■□□□□ 0.04
CXXC1-212ENST00000589940 ZFP3Q96NJ6 502 aa15.31■□□□□ 0.04
CXXC1-212ENST00000589940 COQ7Q99807 217 aa15.31■□□□□ 0.04
CXXC1-212ENST00000589940 TNFSF13O75888 250 aa15.3■□□□□ 0.04
CXXC1-212ENST00000589940 CNOT4O95628 575 aaKnown RBP15.3■□□□□ 0.04
CXXC1-212ENST00000589940 IL2RAP01589 272 aa15.3■□□□□ 0.04
CXXC1-212ENST00000589940 SH3BGRP55822 239 aaPredicted RBP15.3■□□□□ 0.04
CXXC1-212ENST00000589940 FABP5Q01469 135 aa15.3■□□□□ 0.04
CXXC1-212ENST00000589940 RBPJQ06330 500 aa15.3■□□□□ 0.04
CXXC1-212ENST00000589940 SPCS2Q15005 226 aa15.3■□□□□ 0.04
CXXC1-212ENST00000589940 VWA1Q6PCB0 445 aa15.3■□□□□ 0.04
CXXC1-212ENST00000589940 SLC16A14Q7RTX9 510 aa15.3■□□□□ 0.04
CXXC1-212ENST00000589940 SYT9Q86SS6 491 aa15.3■□□□□ 0.04
CXXC1-212ENST00000589940 RPRMLQ8N4K4 120 aa15.3■□□□□ 0.04
CXXC1-212ENST00000589940 MS4A15Q8N5U1 240 aa15.3■□□□□ 0.04
CXXC1-212ENST00000589940 OR2G2Q8NGZ5 317 aa15.3■□□□□ 0.04
CXXC1-212ENST00000589940 FRRS1LQ9P0K9 344 aa15.3■□□□□ 0.04
CXXC1-212ENST00000589940 FBXL3Q9UKT7 428 aa15.3■□□□□ 0.04
CXXC1-212ENST00000589940 NCOA6Q14686 2063 aaPredicted RBP15.3■□□□□ 0.04
CXXC1-212ENST00000589940 TRDV1A0A1B0GX56 115 aa15.29■□□□□ 0.04
CXXC1-212ENST00000589940 A0A1W2PPW3 197 aa15.29■□□□□ 0.04
CXXC1-212ENST00000589940 GPRIN2O60269 458 aa15.29■□□□□ 0.04
CXXC1-212ENST00000589940 TMIGD3P0DMS9 266 aaPredicted RBP15.29■□□□□ 0.04
CXXC1-212ENST00000589940 GALP22466 123 aa15.29■□□□□ 0.04
CXXC1-212ENST00000589940 DCTDP32321 178 aa15.29■□□□□ 0.04
CXXC1-212ENST00000589940 PCBD1P61457 104 aa15.29■□□□□ 0.04
CXXC1-212ENST00000589940 C3P1Q6ZMU1 363 aa15.29■□□□□ 0.04
CXXC1-212ENST00000589940 SKA3Q8IX90 412 aa15.29■□□□□ 0.04
CXXC1-212ENST00000589940 PDCD1LG2Q9BQ51 273 aa15.29■□□□□ 0.04
CXXC1-212ENST00000589940 WACQ9BTA9 647 aa15.29■□□□□ 0.04
CXXC1-212ENST00000589940 DDX28Q9NUL7 540 aaKnown RBP15.29■□□□□ 0.04
CXXC1-212ENST00000589940 R4GMQ9 66 aa15.29■□□□□ 0.04
CXXC1-212ENST00000589940 ZFPL1O95159 310 aa15.29■□□□□ 0.04
CXXC1-212ENST00000589940 ITGA5P08648 1049 aa15.29■□□□□ 0.04
CXXC1-212ENST00000589940 TGFBR1P36897 503 aa15.29■□□□□ 0.04
CXXC1-212ENST00000589940 SCRN3Q0VDG4 424 aa15.29■□□□□ 0.04
CXXC1-212ENST00000589940 NFATC3Q12968 1075 aa15.29■□□□□ 0.04
CXXC1-212ENST00000589940 TAF13Q15543 124 aa15.29■□□□□ 0.04
CXXC1-212ENST00000589940 ZNF544Q6NX49 715 aa15.29■□□□□ 0.04
CXXC1-212ENST00000589940 ALDH16A1Q8IZ83 802 aa15.29■□□□□ 0.04
CXXC1-212ENST00000589940 NDNFQ8TB73 568 aa15.29■□□□□ 0.04
CXXC1-212ENST00000589940 C4orf45Q96LM5 186 aa15.29■□□□□ 0.04
CXXC1-212ENST00000589940 HDHD5Q9BXW7 423 aa15.29■□□□□ 0.04
CXXC1-212ENST00000589940 KCNN2Q9H2S1 579 aa15.29■□□□□ 0.04
CXXC1-212ENST00000589940 RNF167Q9H6Y7 350 aa15.29■□□□□ 0.04
CXXC1-212ENST00000589940 NIPAL2Q9H841 368 aa15.29■□□□□ 0.04
CXXC1-212ENST00000589940 PLSCR4Q9NRQ2 329 aa15.29■□□□□ 0.04
CXXC1-212ENST00000589940 TXNL4BQ9NX01 149 aaKnown RBP15.29■□□□□ 0.04
CXXC1-212ENST00000589940 ARHGAP21Q5T5U3 1957 aa15.29■□□□□ 0.04
CXXC1-212ENST00000589940 SRSF10O75494 262 aaKnown RBP15.28■□□□□ 0.04
CXXC1-212ENST00000589940 RGS9O75916 674 aaPredicted RBP15.28■□□□□ 0.04
CXXC1-212ENST00000589940 IL18BPO95998 194 aa15.28■□□□□ 0.04
CXXC1-212ENST00000589940 PNPP00491 289 aa15.28■□□□□ 0.04
CXXC1-212ENST00000589940 PCSK6P29122 969 aa15.28■□□□□ 0.04
CXXC1-212ENST00000589940 FGF9P31371 208 aaPredicted RBP15.28■□□□□ 0.04
CXXC1-212ENST00000589940 CCR9P51686 369 aa15.28■□□□□ 0.04
CXXC1-212ENST00000589940 GRB2P62993 217 aaKnown RBP15.28■□□□□ 0.04
CXXC1-212ENST00000589940 ZNF829Q3KNS6 432 aaPredicted RBP15.28■□□□□ 0.04
CXXC1-212ENST00000589940 CCDC92Q53HC0 331 aaPredicted RBP15.28■□□□□ 0.04
CXXC1-212ENST00000589940 ELFN2Q5R3F8 820 aa15.28■□□□□ 0.04
CXXC1-212ENST00000589940 PCSK4Q6UW60 755 aa15.28■□□□□ 0.04
CXXC1-212ENST00000589940 Q6ZT83 130 aa15.28■□□□□ 0.04
CXXC1-212ENST00000589940 PRSS35Q8N3Z0 413 aa15.28■□□□□ 0.04
CXXC1-212ENST00000589940 DCLRE1CQ96SD1 692 aaKnown RBP15.28■□□□□ 0.04
CXXC1-212ENST00000589940 ATF6BQ99941 703 aa15.28■□□□□ 0.04
CXXC1-212ENST00000589940 PTTG2Q9NZH5 202 aa15.28■□□□□ 0.04
CXXC1-212ENST00000589940 SLC5A6Q9Y289 635 aa15.28■□□□□ 0.04
CXXC1-212ENST00000589940 TIMM10BQ9Y5J6 103 aa15.28■□□□□ 0.04
CXXC1-212ENST00000589940 TMEM269A0A1B0GVZ9 245 aa15.28■□□□□ 0.04
CXXC1-212ENST00000589940 OR4C45A6NMZ5 311 aa15.28■□□□□ 0.04
CXXC1-212ENST00000589940 GABRPO00591 440 aa15.28■□□□□ 0.04
CXXC1-212ENST00000589940 ZNF32P17041 273 aa15.28■□□□□ 0.04
CXXC1-212ENST00000589940 HSD11B1P28845 292 aa15.28■□□□□ 0.04
CXXC1-212ENST00000589940 CEACAM8P31997 349 aaPredicted RBP15.28■□□□□ 0.04
CXXC1-212ENST00000589940 MMP16P51512 607 aa15.28■□□□□ 0.04
CXXC1-212ENST00000589940 MFGE8Q08431 387 aaPredicted RBP15.28■□□□□ 0.04
CXXC1-212ENST00000589940 WDR38Q5JTN6 314 aa15.28■□□□□ 0.04
CXXC1-212ENST00000589940 BTLAQ7Z6A9 289 aa15.28■□□□□ 0.04
CXXC1-212ENST00000589940 CATSPERDQ86XM0 798 aa15.28■□□□□ 0.04
CXXC1-212ENST00000589940 NAXEQ8NCW5 288 aa15.28■□□□□ 0.04
CXXC1-212ENST00000589940 OR5AK2Q8NH90 309 aa15.28■□□□□ 0.04
CXXC1-212ENST00000589940 ABHD4Q8TB40 342 aa15.28■□□□□ 0.04
CXXC1-212ENST00000589940 STARD4Q96DR4 205 aa15.28■□□□□ 0.04
CXXC1-212ENST00000589940 DCUN1D5Q9BTE7 237 aa15.28■□□□□ 0.04
CXXC1-212ENST00000589940 PLEK2Q9NYT0 353 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms