RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 MRPL24Q96A35 216 aaKnown RBP17.38■□□□□ 0.37
DDX39A-207ENST00000588542 OTULINQ96BN8 352 aa17.38■□□□□ 0.37
DDX39A-207ENST00000588542 DOK1Q99704 481 aa17.38■□□□□ 0.37
DDX39A-207ENST00000588542 GABARAPL3Q9BY60 117 aa17.38■□□□□ 0.37
DDX39A-207ENST00000588542 MRPL37Q9BZE1 423 aaKnown RBP17.38■□□□□ 0.37
DDX39A-207ENST00000588542 USE1Q9NZ43 259 aa17.38■□□□□ 0.37
DDX39A-207ENST00000588542 ATPIF1Q9UII2 106 aa17.38■□□□□ 0.37
DDX39A-207ENST00000588542 KCNG2Q9UJ96 466 aa17.38■□□□□ 0.37
DDX39A-207ENST00000588542 GDF2Q9UK05 429 aaPredicted RBP17.38■□□□□ 0.37
DDX39A-207ENST00000588542 VSTM5A8MXK1 200 aa17.37■□□□□ 0.37
DDX39A-207ENST00000588542 H7C417 338 aa17.37■□□□□ 0.37
DDX39A-207ENST00000588542 EI24O14681 340 aa17.37■□□□□ 0.37
DDX39A-207ENST00000588542 GLCEO94923 617 aa17.37■□□□□ 0.37
DDX39A-207ENST00000588542 ZNF823P16415 610 aa17.37■□□□□ 0.37
DDX39A-207ENST00000588542 PAICSP22234 425 aaKnown RBP17.37■□□□□ 0.37
DDX39A-207ENST00000588542 RAD52P43351 418 aa17.37■□□□□ 0.37
DDX39A-207ENST00000588542 ATP5J2P56134 94 aa17.37■□□□□ 0.37
DDX39A-207ENST00000588542 RPS23P62266 143 aaKnown RBP17.37■□□□□ 0.37
DDX39A-207ENST00000588542 ADAM8P78325 824 aa17.37■□□□□ 0.37
DDX39A-207ENST00000588542 EFNB1P98172 346 aa17.37■□□□□ 0.37
DDX39A-207ENST00000588542 SNAPC1Q16533 368 aa17.37■□□□□ 0.37
DDX39A-207ENST00000588542 PCK2Q16822 640 aa17.37■□□□□ 0.37
DDX39A-207ENST00000588542 RSPO1Q2MKA7 263 aaPredicted RBP17.37■□□□□ 0.37
DDX39A-207ENST00000588542 ELFN2Q5R3F8 820 aa17.37■□□□□ 0.37
DDX39A-207ENST00000588542 C12orf73Q69YU5 71 aa17.37■□□□□ 0.37
DDX39A-207ENST00000588542 LRP11Q86VZ4 500 aa17.37■□□□□ 0.37
DDX39A-207ENST00000588542 BBS1Q8NFJ9 593 aa17.37■□□□□ 0.37
DDX39A-207ENST00000588542 OR6K6Q8NGW6 343 aa17.37■□□□□ 0.37
DDX39A-207ENST00000588542 TRMT61AQ96FX7 289 aaKnown RBP17.37■□□□□ 0.37
DDX39A-207ENST00000588542 MAP6Q96JE9 813 aa17.37■□□□□ 0.37
DDX39A-207ENST00000588542 CDADC1Q9BWV3 514 aa17.37■□□□□ 0.37
DDX39A-207ENST00000588542 TEX12Q9BXU0 123 aa17.37■□□□□ 0.37
DDX39A-207ENST00000588542 BCL2L14Q9BZR8 327 aa17.37■□□□□ 0.37
DDX39A-207ENST00000588542 OR51V1Q9H2C8 321 aa17.37■□□□□ 0.37
DDX39A-207ENST00000588542 MARCH7Q9H992 704 aa17.37■□□□□ 0.37
DDX39A-207ENST00000588542 PNRC2Q9NPJ4 139 aaKnown RBP17.37■□□□□ 0.37
DDX39A-207ENST00000588542 ENOPH1Q9UHY7 261 aa17.37■□□□□ 0.37
DDX39A-207ENST00000588542 FZR1Q9UM11 496 aa17.37■□□□□ 0.37
DDX39A-207ENST00000588542 M0R129 80 aa17.36■□□□□ 0.37
DDX39A-207ENST00000588542 PRKYO43930 277 aa17.36■□□□□ 0.37
DDX39A-207ENST00000588542 NGFP01138 241 aa17.36■□□□□ 0.37
DDX39A-207ENST00000588542 IGHV4-39P01824 125 aa17.36■□□□□ 0.37
DDX39A-207ENST00000588542 DBHP09172 617 aa17.36■□□□□ 0.37
DDX39A-207ENST00000588542 SLC2A5P22732 501 aa17.36■□□□□ 0.37
DDX39A-207ENST00000588542 EVX1P49640 407 aa17.36■□□□□ 0.37
DDX39A-207ENST00000588542 ENTPD1P49961 510 aa17.36■□□□□ 0.37
DDX39A-207ENST00000588542 TEX30Q5JUR7 227 aa17.36■□□□□ 0.37
DDX39A-207ENST00000588542 Q5PR19 223 aa17.36■□□□□ 0.37
DDX39A-207ENST00000588542 RFPL4BQ6ZWI9 263 aa17.36■□□□□ 0.37
DDX39A-207ENST00000588542 CXXC5Q7LFL8 322 aaKnown RBP17.36■□□□□ 0.37
DDX39A-207ENST00000588542 CBR4Q8N4T8 237 aa17.36■□□□□ 0.37
DDX39A-207ENST00000588542 OR10S1Q8NGN2 331 aa17.36■□□□□ 0.37
DDX39A-207ENST00000588542 OR1J1Q8NGS3 322 aa17.36■□□□□ 0.37
DDX39A-207ENST00000588542 OR2AJ1Q8NGZ0 328 aa17.36■□□□□ 0.37
DDX39A-207ENST00000588542 STMN2Q93045 179 aa17.36■□□□□ 0.37
DDX39A-207ENST00000588542 PLEKHA8Q96JA3 519 aa17.36■□□□□ 0.37
DDX39A-207ENST00000588542 C4orf45Q96LM5 186 aa17.36■□□□□ 0.37
DDX39A-207ENST00000588542 COQ7Q99807 217 aa17.36■□□□□ 0.37
DDX39A-207ENST00000588542 HDHD2Q9H0R4 259 aa17.36■□□□□ 0.37
DDX39A-207ENST00000588542 MYEF2Q9P2K5 600 aaKnown RBP17.36■□□□□ 0.37
DDX39A-207ENST00000588542 FLNAP21333 2647 aaKnown RBP17.36■□□□□ 0.37
DDX39A-207ENST00000588542 PRODHO43272 600 aa17.35■□□□□ 0.37
DDX39A-207ENST00000588542 LCKP06239 509 aa17.35■□□□□ 0.37
DDX39A-207ENST00000588542 ZNF250P15622 560 aa17.35■□□□□ 0.37
DDX39A-207ENST00000588542 BLVRAP53004 296 aa17.35■□□□□ 0.37
DDX39A-207ENST00000588542 SNRPD2P62316 118 aaKnown RBP17.35■□□□□ 0.37
DDX39A-207ENST00000588542 KRTAP27-1Q3LI81 207 aa17.35■□□□□ 0.37
DDX39A-207ENST00000588542 SHEQ5VZ18 495 aa17.35■□□□□ 0.37
DDX39A-207ENST00000588542 RGS7BPQ6MZT1 257 aaPredicted RBP17.35■□□□□ 0.37
DDX39A-207ENST00000588542 TMEM154Q6P9G4 183 aa17.35■□□□□ 0.37
DDX39A-207ENST00000588542 PRSS57Q6UWY2 283 aa17.35■□□□□ 0.37
DDX39A-207ENST00000588542 WFDC11Q8NEX6 87 aa17.35■□□□□ 0.37
DDX39A-207ENST00000588542 SYT3Q9BQG1 590 aa17.35■□□□□ 0.37
DDX39A-207ENST00000588542 RIBC2Q9H4K1 309 aa17.35■□□□□ 0.37
DDX39A-207ENST00000588542 EIF3KQ9UBQ5 218 aaKnown RBP17.35■□□□□ 0.37
DDX39A-207ENST00000588542 PMF1-BGLAPU3KQ54 211 aa17.35■□□□□ 0.37
DDX39A-207ENST00000588542 E9PQ18 207 aa17.34■□□□□ 0.37
DDX39A-207ENST00000588542 ZNF593O00488 134 aaPredicted RBP17.34■□□□□ 0.37
DDX39A-207ENST00000588542 BAG2O95816 211 aa17.34■□□□□ 0.37
DDX39A-207ENST00000588542 CLPTM1O96005 669 aa17.34■□□□□ 0.37
DDX39A-207ENST00000588542 BMP4P12644 408 aa17.34■□□□□ 0.37
DDX39A-207ENST00000588542 GSTT1P30711 240 aa17.34■□□□□ 0.37
DDX39A-207ENST00000588542 ALDH3A2P51648 485 aa17.34■□□□□ 0.37
DDX39A-207ENST00000588542 TIGD4Q8IY51 512 aa17.34■□□□□ 0.37
DDX39A-207ENST00000588542 ZMYND19Q96E35 227 aaPredicted RBP17.34■□□□□ 0.37
DDX39A-207ENST00000588542 MARS2Q96GW9 593 aaKnown RBP17.34■□□□□ 0.37
DDX39A-207ENST00000588542 PITX2Q99697 317 aa17.34■□□□□ 0.37
DDX39A-207ENST00000588542 SLC29A1Q99808 456 aa17.34■□□□□ 0.37
DDX39A-207ENST00000588542 C9orf16Q9BUW7 83 aa17.34■□□□□ 0.37
DDX39A-207ENST00000588542 ELOVL3Q9HB03 270 aa17.34■□□□□ 0.37
DDX39A-207ENST00000588542 GRIP1Q9Y3R0 1128 aa17.34■□□□□ 0.37
DDX39A-207ENST00000588542 IGLV3-9A0A075B6K5 115 aa17.33■□□□□ 0.36
DDX39A-207ENST00000588542 ABHD16AO95870 558 aa17.33■□□□□ 0.36
DDX39A-207ENST00000588542 SPARCP09486 303 aa17.33■□□□□ 0.36
DDX39A-207ENST00000588542 PPOXP50336 477 aa17.33■□□□□ 0.36
DDX39A-207ENST00000588542 PPP1CBP62140 327 aa17.33■□□□□ 0.36
DDX39A-207ENST00000588542 APOFQ13790 326 aa17.33■□□□□ 0.36
DDX39A-207ENST00000588542 KLHL12Q53G59 568 aa17.33■□□□□ 0.36
DDX39A-207ENST00000588542 TMEM255AQ5JRV8 349 aa17.33■□□□□ 0.36
DDX39A-207ENST00000588542 SLC35D3Q5M8T2 416 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms