RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 ERICH5Q6P6B1 374 aa12.12□□□□□ -0.47
SDF2-202ENST00000585428 LRRN1Q6UXK5 716 aa12.12□□□□□ -0.47
SDF2-202ENST00000585428 VASH1Q7L8A9 365 aaPredicted RBP12.12□□□□□ -0.47
SDF2-202ENST00000585428 OAFQ86UD1 273 aa12.12□□□□□ -0.47
SDF2-202ENST00000585428 MUC20Q8N307 709 aaPredicted RBP12.12□□□□□ -0.47
SDF2-202ENST00000585428 FAM156AQ8NDB6 213 aa12.12□□□□□ -0.47
SDF2-202ENST00000585428 UPRTQ96BW1 309 aa12.12□□□□□ -0.47
SDF2-202ENST00000585428 COG8Q96MW5 612 aa12.12□□□□□ -0.47
SDF2-202ENST00000585428 OR2V2Q96R30 315 aa12.12□□□□□ -0.47
SDF2-202ENST00000585428 EMC7Q9NPA0 242 aa12.12□□□□□ -0.47
SDF2-202ENST00000585428 LRCH1Q9Y2L9 728 aa12.12□□□□□ -0.47
SDF2-202ENST00000585428 MMP24Q9Y5R2 645 aa12.12□□□□□ -0.47
SDF2-202ENST00000585428 TRAV27A0A087WT01 109 aa12.11□□□□□ -0.47
SDF2-202ENST00000585428 KIR2DS1A0A191URI9 304 aa12.11□□□□□ -0.47
SDF2-202ENST00000585428 FFAR1O14842 300 aa12.11□□□□□ -0.47
SDF2-202ENST00000585428 SGCEO43556 437 aa12.11□□□□□ -0.47
SDF2-202ENST00000585428 ZNF26P17031 533 aaPredicted RBP12.11□□□□□ -0.47
SDF2-202ENST00000585428 ERFP50548 548 aa12.11□□□□□ -0.47
SDF2-202ENST00000585428 SCRN3Q0VDG4 424 aa12.11□□□□□ -0.47
SDF2-202ENST00000585428 TTMPQ5BVD1 217 aa12.11□□□□□ -0.47
SDF2-202ENST00000585428 SLC27A4Q6P1M0 643 aa12.11□□□□□ -0.47
SDF2-202ENST00000585428 JAZF1Q86VZ6 243 aa12.11□□□□□ -0.47
SDF2-202ENST00000585428 RNF113BQ8IZP6 322 aaKnown RBP12.11□□□□□ -0.47
SDF2-202ENST00000585428 PARP8Q8N3A8 854 aa12.11□□□□□ -0.47
SDF2-202ENST00000585428 POU5F2Q8N7G0 328 aa12.11□□□□□ -0.47
SDF2-202ENST00000585428 PCYOX1LQ8NBM8 494 aa12.11□□□□□ -0.47
SDF2-202ENST00000585428 DYDC1Q8WWB3 177 aa12.11□□□□□ -0.47
SDF2-202ENST00000585428 RAB40AQ8WXH6 277 aa12.11□□□□□ -0.47
SDF2-202ENST00000585428 TMIGD2Q96BF3 282 aa12.11□□□□□ -0.47
SDF2-202ENST00000585428 PRRC1Q96M27 445 aa12.11□□□□□ -0.47
SDF2-202ENST00000585428 MAGEB18Q96M61 343 aa12.11□□□□□ -0.47
SDF2-202ENST00000585428 SSBP3Q9BWW4 388 aaPredicted RBP12.11□□□□□ -0.47
SDF2-202ENST00000585428 OR5V1Q9UGF6 321 aa12.11□□□□□ -0.47
SDF2-202ENST00000585428 SNX13Q9Y5W8 968 aa12.11□□□□□ -0.47
SDF2-202ENST00000585428 IGHV2-70DA0A0C4DH43 119 aa12.1□□□□□ -0.47
SDF2-202ENST00000585428 OR6C6A6NF89 314 aa12.1□□□□□ -0.47
SDF2-202ENST00000585428 H7C1C5 153 aa12.1□□□□□ -0.47
SDF2-202ENST00000585428 DOK2O60496 412 aa12.1□□□□□ -0.47
SDF2-202ENST00000585428 MDKP21741 143 aaPredicted RBP12.1□□□□□ -0.47
SDF2-202ENST00000585428 HTR5AP47898 357 aa12.1□□□□□ -0.47
SDF2-202ENST00000585428 SLC9A3P48764 834 aa12.1□□□□□ -0.47
SDF2-202ENST00000585428 MMP16P51512 607 aa12.1□□□□□ -0.47
SDF2-202ENST00000585428 LCN6P62502 163 aa12.1□□□□□ -0.47
SDF2-202ENST00000585428 GUCY1A3Q02108 690 aa12.1□□□□□ -0.47
SDF2-202ENST00000585428 CCDC92Q53HC0 331 aaPredicted RBP12.1□□□□□ -0.47
SDF2-202ENST00000585428 COQ5Q5HYK3 327 aa12.1□□□□□ -0.47
SDF2-202ENST00000585428 FBXW12Q6X9E4 464 aa12.1□□□□□ -0.47
SDF2-202ENST00000585428 FAM122BQ7Z309 247 aa12.1□□□□□ -0.47
SDF2-202ENST00000585428 KLBQ86Z14 1044 aa12.1□□□□□ -0.47
SDF2-202ENST00000585428 NRMQ8IXM6 262 aa12.1□□□□□ -0.47
SDF2-202ENST00000585428 MICU2Q8IYU8 434 aa12.1□□□□□ -0.47
SDF2-202ENST00000585428 ATG16L2Q8NAA4 619 aa12.1□□□□□ -0.47
SDF2-202ENST00000585428 OR8G5Q8NG78 346 aa12.1□□□□□ -0.47
SDF2-202ENST00000585428 SLC7A6Q92536 515 aa12.1□□□□□ -0.47
SDF2-202ENST00000585428 TPD52L3Q96J77 140 aa12.1□□□□□ -0.47
SDF2-202ENST00000585428 INTS9Q9NV88 658 aaKnown RBP12.1□□□□□ -0.47
SDF2-202ENST00000585428 RHCGQ9UBD6 479 aa12.1□□□□□ -0.47
SDF2-202ENST00000585428 GRHPRQ9UBQ7 328 aa12.1□□□□□ -0.47
SDF2-202ENST00000585428 MIOXQ9UGB7 285 aa12.1□□□□□ -0.47
SDF2-202ENST00000585428 ADAM18Q9Y3Q7 739 aa12.1□□□□□ -0.47
SDF2-202ENST00000585428 TANC2Q9HCD6 1990 aa12.09□□□□□ -0.47
SDF2-202ENST00000585428 IGHV3OR16-10A0A075B7F0 116 aa12.09□□□□□ -0.47
SDF2-202ENST00000585428 A0A087WUU8 490 aa12.09□□□□□ -0.47
SDF2-202ENST00000585428 TEX13CA0A0J9YWL9 993 aa12.09□□□□□ -0.47
SDF2-202ENST00000585428 A0A1B0GWJ7 208 aa12.09□□□□□ -0.47
SDF2-202ENST00000585428 PRSS37A4D1T9 235 aa12.09□□□□□ -0.47
SDF2-202ENST00000585428 EFCAB9A8MZ26 197 aa12.09□□□□□ -0.47
SDF2-202ENST00000585428 H0YL77 283 aa12.09□□□□□ -0.47
SDF2-202ENST00000585428 J3QW42 95 aa12.09□□□□□ -0.47
SDF2-202ENST00000585428 CDC42EP2O14613 210 aa12.09□□□□□ -0.47
SDF2-202ENST00000585428 EDF1O60869 148 aaKnown RBP12.09□□□□□ -0.47
SDF2-202ENST00000585428 PTP4A3O75365 173 aa12.09□□□□□ -0.47
SDF2-202ENST00000585428 ZNF205O95201 554 aa12.09□□□□□ -0.47
SDF2-202ENST00000585428 GPANK1O95872 356 aa12.09□□□□□ -0.47
SDF2-202ENST00000585428 CD14P08571 375 aa12.09□□□□□ -0.47
SDF2-202ENST00000585428 CTLA4P16410 223 aa12.09□□□□□ -0.47
SDF2-202ENST00000585428 IFNA8P32881 189 aa12.09□□□□□ -0.47
SDF2-202ENST00000585428 PMELP40967 661 aa12.09□□□□□ -0.47
SDF2-202ENST00000585428 YAP1P46937 504 aaKnown RBP12.09□□□□□ -0.47
SDF2-202ENST00000585428 LSM6P62312 80 aaKnown RBP12.09□□□□□ -0.47
SDF2-202ENST00000585428 AQP6Q13520 282 aa12.09□□□□□ -0.47
SDF2-202ENST00000585428 HLXQ14774 488 aaPredicted RBP12.09□□□□□ -0.47
SDF2-202ENST00000585428 TRAM2Q15035 370 aa12.09□□□□□ -0.47
SDF2-202ENST00000585428 ZNF181Q2M3W8 571 aa12.09□□□□□ -0.47
SDF2-202ENST00000585428 TBPL2Q6SJ96 375 aa12.09□□□□□ -0.47
SDF2-202ENST00000585428 BTNL3Q6UXE8 466 aa12.09□□□□□ -0.47
SDF2-202ENST00000585428 TMPRSS11FQ6ZWK6 438 aa12.09□□□□□ -0.47
SDF2-202ENST00000585428 OR13G1Q8NGZ3 307 aa12.09□□□□□ -0.47
SDF2-202ENST00000585428 OR1F12Q8NHA8 337 aa12.09□□□□□ -0.47
SDF2-202ENST00000585428 ZNF420Q8TAQ5 688 aaPredicted RBP12.09□□□□□ -0.47
SDF2-202ENST00000585428 MEGF10Q96KG7 1140 aa12.09□□□□□ -0.47
SDF2-202ENST00000585428 Q96M85 177 aa12.09□□□□□ -0.47
SDF2-202ENST00000585428 TMEM246Q9BRR3 403 aa12.09□□□□□ -0.47
SDF2-202ENST00000585428 SIKE1Q9BRV8 207 aa12.09□□□□□ -0.47
SDF2-202ENST00000585428 FNDC11Q9BVV2 318 aa12.09□□□□□ -0.47
SDF2-202ENST00000585428 A0A0G2JND7 137 aa12.08□□□□□ -0.48
SDF2-202ENST00000585428 J3KTA2 159 aa12.08□□□□□ -0.48
SDF2-202ENST00000585428 CYB5R3P00387 301 aaPredicted RBP12.08□□□□□ -0.48
SDF2-202ENST00000585428 DBHP09172 617 aa12.08□□□□□ -0.48
SDF2-202ENST00000585428 OMGP23515 440 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms