RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 Q9H521 79 aa12.66□□□□□ -0.38
SCAMP4-209ENST00000585335 LAMP5Q9UJQ1 280 aa12.66□□□□□ -0.38
SCAMP4-209ENST00000585335 ATP23Q9Y6H3 246 aa12.66□□□□□ -0.38
SCAMP4-209ENST00000585335 FAM221AA4D161 298 aa12.65□□□□□ -0.38
SCAMP4-209ENST00000585335 C5orf49A4QMS7 147 aa12.65□□□□□ -0.38
SCAMP4-209ENST00000585335 VSTM5A8MXK1 200 aa12.65□□□□□ -0.38
SCAMP4-209ENST00000585335 ZNF878C9JN71 531 aa12.65□□□□□ -0.38
SCAMP4-209ENST00000585335 ATP6V1G2-DDX39BF2Z307 99 aa12.65□□□□□ -0.38
SCAMP4-209ENST00000585335 PHYHO14832 338 aa12.65□□□□□ -0.38
SCAMP4-209ENST00000585335 SYNGR3O43761 229 aa12.65□□□□□ -0.38
SCAMP4-209ENST00000585335 CLIC3O95833 236 aa12.65□□□□□ -0.38
SCAMP4-209ENST00000585335 LYNP07948 512 aa12.65□□□□□ -0.38
SCAMP4-209ENST00000585335 GABRB1P18505 474 aa12.65□□□□□ -0.38
SCAMP4-209ENST00000585335 RPS27P42677 84 aaKnown RBP12.65□□□□□ -0.38
SCAMP4-209ENST00000585335 SLC15A1P46059 708 aa12.65□□□□□ -0.38
SCAMP4-209ENST00000585335 RPS23P62266 143 aaKnown RBP12.65□□□□□ -0.38
SCAMP4-209ENST00000585335 CCDC92Q53HC0 331 aaPredicted RBP12.65□□□□□ -0.38
SCAMP4-209ENST00000585335 CFAP77Q6ZQR2 320 aa12.65□□□□□ -0.38
SCAMP4-209ENST00000585335 ZNF584Q8IVC4 421 aa12.65□□□□□ -0.38
SCAMP4-209ENST00000585335 ZNF295-AS1Q8N0V1 137 aa12.65□□□□□ -0.38
SCAMP4-209ENST00000585335 CPEB3Q8NE35 698 aaKnown RBP12.65□□□□□ -0.38
SCAMP4-209ENST00000585335 OR51G2Q8NGK0 314 aa12.65□□□□□ -0.38
SCAMP4-209ENST00000585335 OTOSQ8NHW6 89 aa12.65□□□□□ -0.38
SCAMP4-209ENST00000585335 THEM6Q8WUY1 208 aa12.65□□□□□ -0.38
SCAMP4-209ENST00000585335 ASB17Q8WXJ9 295 aa12.65□□□□□ -0.38
SCAMP4-209ENST00000585335 SPTSSAQ969W0 71 aa12.65□□□□□ -0.38
SCAMP4-209ENST00000585335 DCLRE1CQ96SD1 692 aaKnown RBP12.65□□□□□ -0.38
SCAMP4-209ENST00000585335 MYCBPQ99417 103 aaPredicted RBP12.65□□□□□ -0.38
SCAMP4-209ENST00000585335 TMEM204Q9BSN7 226 aa12.65□□□□□ -0.38
SCAMP4-209ENST00000585335 COPS4Q9BT78 406 aa12.65□□□□□ -0.38
SCAMP4-209ENST00000585335 CENPMQ9NSP4 180 aa12.65□□□□□ -0.38
SCAMP4-209ENST00000585335 RPL36Q9Y3U8 105 aaKnown RBP12.65□□□□□ -0.38
SCAMP4-209ENST00000585335 PCDHGB1Q9Y5G3 927 aa12.65□□□□□ -0.38
SCAMP4-209ENST00000585335 PKDREJQ9NTG1 2253 aa12.65□□□□□ -0.38
SCAMP4-209ENST00000585335 IRGMA1A4Y4 181 aa12.64□□□□□ -0.39
SCAMP4-209ENST00000585335 ZNF670-ZNF695F2Z2N8 137 aa12.64□□□□□ -0.39
SCAMP4-209ENST00000585335 SBK2P0C263 348 aa12.64□□□□□ -0.39
SCAMP4-209ENST00000585335 ZNF35P13682 527 aa12.64□□□□□ -0.39
SCAMP4-209ENST00000585335 LOXP28300 417 aaPredicted RBP12.64□□□□□ -0.39
SCAMP4-209ENST00000585335 PCSK6P29122 969 aa12.64□□□□□ -0.39
SCAMP4-209ENST00000585335 GRB2P62993 217 aaKnown RBP12.64□□□□□ -0.39
SCAMP4-209ENST00000585335 ACTC1P68032 377 aa12.64□□□□□ -0.39
SCAMP4-209ENST00000585335 ACTA1P68133 377 aa12.64□□□□□ -0.39
SCAMP4-209ENST00000585335 SPOCK1Q08629 439 aa12.64□□□□□ -0.39
SCAMP4-209ENST00000585335 KCTD18Q6PI47 426 aaPredicted RBP12.64□□□□□ -0.39
SCAMP4-209ENST00000585335 RHOUQ7L0Q8 258 aa12.64□□□□□ -0.39
SCAMP4-209ENST00000585335 THAP5Q7Z6K1 395 aa12.64□□□□□ -0.39
SCAMP4-209ENST00000585335 MYPOPQ86VE0 399 aaPredicted RBP12.64□□□□□ -0.39
SCAMP4-209ENST00000585335 CDC20BQ86Y33 519 aa12.64□□□□□ -0.39
SCAMP4-209ENST00000585335 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.64□□□□□ -0.39
SCAMP4-209ENST00000585335 SLC35F2Q8IXU6 374 aa12.64□□□□□ -0.39
SCAMP4-209ENST00000585335 C1orf174Q8IYL3 243 aa12.64□□□□□ -0.39
SCAMP4-209ENST00000585335 KBTBD8Q8NFY9 601 aa12.64□□□□□ -0.39
SCAMP4-209ENST00000585335 SLAMF6Q96DU3 332 aa12.64□□□□□ -0.39
SCAMP4-209ENST00000585335 RNFT2Q96EX2 444 aa12.64□□□□□ -0.39
SCAMP4-209ENST00000585335 MRPL48Q96GC5 212 aaKnown RBP12.64□□□□□ -0.39
SCAMP4-209ENST00000585335 MAP6Q96JE9 813 aa12.64□□□□□ -0.39
SCAMP4-209ENST00000585335 POM121L2Q96KW2 1035 aa12.64□□□□□ -0.39
SCAMP4-209ENST00000585335 HS3ST6Q96QI5 342 aa12.64□□□□□ -0.39
SCAMP4-209ENST00000585335 ZNF184Q99676 751 aaPredicted RBP12.64□□□□□ -0.39
SCAMP4-209ENST00000585335 ABHD6Q9BV23 337 aa12.64□□□□□ -0.39
SCAMP4-209ENST00000585335 ELOVL3Q9HB03 270 aa12.64□□□□□ -0.39
SCAMP4-209ENST00000585335 ADGRL4Q9HBW9 690 aa12.64□□□□□ -0.39
SCAMP4-209ENST00000585335 FAIMQ9NVQ4 179 aa12.64□□□□□ -0.39
SCAMP4-209ENST00000585335 RAB26Q9ULW5 256 aa12.64□□□□□ -0.39
SCAMP4-209ENST00000585335 EDARQ9UNE0 448 aa12.64□□□□□ -0.39
SCAMP4-209ENST00000585335 SHISA9B4DS77 424 aa12.63□□□□□ -0.39
SCAMP4-209ENST00000585335 ABHD16AO95870 558 aa12.63□□□□□ -0.39
SCAMP4-209ENST00000585335 APOC1P02654 83 aa12.63□□□□□ -0.39
SCAMP4-209ENST00000585335 GNAO1P09471 354 aa12.63□□□□□ -0.39
SCAMP4-209ENST00000585335 H2BFMP0C1H6 154 aa12.63□□□□□ -0.39
SCAMP4-209ENST00000585335 OR2T7P0C7T2 308 aa12.63□□□□□ -0.39
SCAMP4-209ENST00000585335 DBTP11182 482 aaKnown RBP12.63□□□□□ -0.39
SCAMP4-209ENST00000585335 HSD11B1P28845 292 aa12.63□□□□□ -0.39
SCAMP4-209ENST00000585335 CALCRP30988 508 aa12.63□□□□□ -0.39
SCAMP4-209ENST00000585335 RAD52P43351 418 aa12.63□□□□□ -0.39
SCAMP4-209ENST00000585335 RGS6P49758 472 aa12.63□□□□□ -0.39
SCAMP4-209ENST00000585335 TPTEP56180 551 aa12.63□□□□□ -0.39
SCAMP4-209ENST00000585335 ISL1P61371 349 aa12.63□□□□□ -0.39
SCAMP4-209ENST00000585335 ZNF91Q05481 1191 aa12.63□□□□□ -0.39
SCAMP4-209ENST00000585335 SNTB2Q13425 540 aaKnown RBP12.63□□□□□ -0.39
SCAMP4-209ENST00000585335 ZNF672Q499Z4 452 aaPredicted RBP12.63□□□□□ -0.39
SCAMP4-209ENST00000585335 KLHL22Q53GT1 634 aa12.63□□□□□ -0.39
SCAMP4-209ENST00000585335 USP51Q70EK9 711 aa12.63□□□□□ -0.39
SCAMP4-209ENST00000585335 KRT77Q7Z794 578 aa12.63□□□□□ -0.39
SCAMP4-209ENST00000585335 NUP37Q8NFH4 326 aa12.63□□□□□ -0.39
SCAMP4-209ENST00000585335 OR2T27Q8NH04 317 aa12.63□□□□□ -0.39
SCAMP4-209ENST00000585335 CNIH3Q8TBE1 160 aa12.63□□□□□ -0.39
SCAMP4-209ENST00000585335 ST7LQ8TDW4 575 aa12.63□□□□□ -0.39
SCAMP4-209ENST00000585335 AKAP1Q92667 903 aaKnown RBP eCLIP12.63□□□□□ -0.39
SCAMP4-209ENST00000585335 FBXW5Q969U6 566 aa12.63□□□□□ -0.39
SCAMP4-209ENST00000585335 COG8Q96MW5 612 aa12.63□□□□□ -0.39
SCAMP4-209ENST00000585335 ANKRD60Q9BZ19 345 aa12.63□□□□□ -0.39
SCAMP4-209ENST00000585335 BCL2L14Q9BZR8 327 aa12.63□□□□□ -0.39
SCAMP4-209ENST00000585335 UBTD1Q9HAC8 227 aa12.63□□□□□ -0.39
SCAMP4-209ENST00000585335 DDX28Q9NUL7 540 aaKnown RBP12.63□□□□□ -0.39
SCAMP4-209ENST00000585335 PTPN13Q12923 2485 aa12.63□□□□□ -0.39
SCAMP4-209ENST00000585335 LOC100509620A0A075B734 347 aa12.62□□□□□ -0.39
SCAMP4-209ENST00000585335 J3QW42 95 aa12.62□□□□□ -0.39
SCAMP4-209ENST00000585335 HS3ST1O14792 307 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms