RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 FGFBP3Q8TAT2 258 aa12.03□□□□□ -0.48
TRAF4-215ENST00000584944 THEM6Q8WUY1 208 aa12.03□□□□□ -0.48
TRAF4-215ENST00000584944 SPTSSAQ969W0 71 aa12.03□□□□□ -0.48
TRAF4-215ENST00000584944 HS3ST6Q96QI5 342 aa12.03□□□□□ -0.48
TRAF4-215ENST00000584944 CNN2Q99439 309 aaKnown RBP12.03□□□□□ -0.48
TRAF4-215ENST00000584944 DDOQ99489 341 aa12.03□□□□□ -0.48
TRAF4-215ENST00000584944 TEAD3Q99594 435 aa12.03□□□□□ -0.48
TRAF4-215ENST00000584944 COPS4Q9BT78 406 aa12.03□□□□□ -0.48
TRAF4-215ENST00000584944 WDR76Q9H967 626 aa12.03□□□□□ -0.48
TRAF4-215ENST00000584944 NOX3Q9HBY0 568 aa12.03□□□□□ -0.48
TRAF4-215ENST00000584944 CENPMQ9NSP4 180 aa12.03□□□□□ -0.48
TRAF4-215ENST00000584944 CISD1Q9NZ45 108 aaKnown RBP12.03□□□□□ -0.48
TRAF4-215ENST00000584944 DNAJC27Q9NZQ0 273 aa12.03□□□□□ -0.48
TRAF4-215ENST00000584944 WARS2Q9UGM6 360 aaKnown RBP12.03□□□□□ -0.48
TRAF4-215ENST00000584944 LAMP5Q9UJQ1 280 aa12.03□□□□□ -0.48
TRAF4-215ENST00000584944 TMEM14AQ9Y6G1 99 aa12.03□□□□□ -0.48
TRAF4-215ENST00000584944 ABCA4P78363 2273 aa12.03□□□□□ -0.48
TRAF4-215ENST00000584944 HS3ST1O14792 307 aa12.02□□□□□ -0.49
TRAF4-215ENST00000584944 ABHD16AO95870 558 aa12.02□□□□□ -0.49
TRAF4-215ENST00000584944 SCG5P05408 212 aa12.02□□□□□ -0.49
TRAF4-215ENST00000584944 LCKP06239 509 aa12.02□□□□□ -0.49
TRAF4-215ENST00000584944 MRPL3P09001 348 aaKnown RBP12.02□□□□□ -0.49
TRAF4-215ENST00000584944 CCL2P13500 99 aa12.02□□□□□ -0.49
TRAF4-215ENST00000584944 HSD11B1P28845 292 aa12.02□□□□□ -0.49
TRAF4-215ENST00000584944 SLC6A9P48067 706 aa12.02□□□□□ -0.49
TRAF4-215ENST00000584944 HSPA13P48723 471 aa12.02□□□□□ -0.49
TRAF4-215ENST00000584944 FABP6P51161 128 aa12.02□□□□□ -0.49
TRAF4-215ENST00000584944 SNTB2Q13425 540 aaKnown RBP12.02□□□□□ -0.49
TRAF4-215ENST00000584944 ZNF672Q499Z4 452 aaPredicted RBP12.02□□□□□ -0.49
TRAF4-215ENST00000584944 C20orf204Q6ZNR8 217 aa12.02□□□□□ -0.49
TRAF4-215ENST00000584944 VASH1Q7L8A9 365 aaPredicted RBP12.02□□□□□ -0.49
TRAF4-215ENST00000584944 DPY19L4Q7Z388 723 aa12.02□□□□□ -0.49
TRAF4-215ENST00000584944 DCXRQ7Z4W1 244 aa12.02□□□□□ -0.49
TRAF4-215ENST00000584944 IPCEF1Q8WWN9 437 aaPredicted RBP12.02□□□□□ -0.49
TRAF4-215ENST00000584944 NRGNQ92686 78 aa12.02□□□□□ -0.49
TRAF4-215ENST00000584944 ATF6BQ99941 703 aa12.02□□□□□ -0.49
TRAF4-215ENST00000584944 WNT5BQ9H1J7 359 aa12.02□□□□□ -0.49
TRAF4-215ENST00000584944 OR51B6Q9H340 312 aa12.02□□□□□ -0.49
TRAF4-215ENST00000584944 ELOVL3Q9HB03 270 aa12.02□□□□□ -0.49
TRAF4-215ENST00000584944 MRPL22Q9NWU5 206 aaKnown RBP12.02□□□□□ -0.49
TRAF4-215ENST00000584944 CYB5R1Q9UHQ9 305 aa12.02□□□□□ -0.49
TRAF4-215ENST00000584944 GDF2Q9UK05 429 aaPredicted RBP12.02□□□□□ -0.49
TRAF4-215ENST00000584944 GRIP1Q9Y3R0 1128 aa12.02□□□□□ -0.49
TRAF4-215ENST00000584944 LHFPL6Q9Y693 200 aa12.02□□□□□ -0.49
TRAF4-215ENST00000584944 SLC16A6O15403 523 aa12.01□□□□□ -0.49
TRAF4-215ENST00000584944 SIAH2O43255 324 aa12.01□□□□□ -0.49
TRAF4-215ENST00000584944 SELENOFO60613 162 aa12.01□□□□□ -0.49
TRAF4-215ENST00000584944 PLAUP00749 431 aa12.01□□□□□ -0.49
TRAF4-215ENST00000584944 FAM157BP0CG42 384 aa12.01□□□□□ -0.49
TRAF4-215ENST00000584944 COX5BP10606 129 aa12.01□□□□□ -0.49
TRAF4-215ENST00000584944 DNASE1P24855 282 aa12.01□□□□□ -0.49
TRAF4-215ENST00000584944 CAPGP40121 348 aa12.01□□□□□ -0.49
TRAF4-215ENST00000584944 NUDT6P53370 316 aa12.01□□□□□ -0.49
TRAF4-215ENST00000584944 SNRPGP62308 76 aaKnown RBP12.01□□□□□ -0.49
TRAF4-215ENST00000584944 TMED1Q13445 227 aa12.01□□□□□ -0.49
TRAF4-215ENST00000584944 IL18R1Q13478 541 aa12.01□□□□□ -0.49
TRAF4-215ENST00000584944 KRTAP21-3Q3LHN1 58 aa12.01□□□□□ -0.49
TRAF4-215ENST00000584944 AGAP6Q5VW22 663 aa12.01□□□□□ -0.49
TRAF4-215ENST00000584944 KCTD18Q6PI47 426 aaPredicted RBP12.01□□□□□ -0.49
TRAF4-215ENST00000584944 LYPD4Q6UWN0 246 aa12.01□□□□□ -0.49
TRAF4-215ENST00000584944 B3GLCTQ6Y288 498 aa12.01□□□□□ -0.49
TRAF4-215ENST00000584944 SPATC1Q76KD6 591 aa12.01□□□□□ -0.49
TRAF4-215ENST00000584944 SLC16A9Q7RTY1 509 aa12.01□□□□□ -0.49
TRAF4-215ENST00000584944 BCDIN3DQ7Z5W3 292 aaKnown RBP12.01□□□□□ -0.49
TRAF4-215ENST00000584944 C8orf59Q8N0T1 100 aaPredicted RBP12.01□□□□□ -0.49
TRAF4-215ENST00000584944 CPEB3Q8NE35 698 aaKnown RBP12.01□□□□□ -0.49
TRAF4-215ENST00000584944 ZNF582Q96NG8 517 aaPredicted RBP12.01□□□□□ -0.49
TRAF4-215ENST00000584944 MYCBPQ99417 103 aaPredicted RBP12.01□□□□□ -0.49
TRAF4-215ENST00000584944 CCL19Q99731 98 aa12.01□□□□□ -0.49
TRAF4-215ENST00000584944 DHRS9Q9BPW9 319 aa12.01□□□□□ -0.49
TRAF4-215ENST00000584944 ADI1Q9BV57 179 aa12.01□□□□□ -0.49
TRAF4-215ENST00000584944 BCL2L14Q9BZR8 327 aa12.01□□□□□ -0.49
TRAF4-215ENST00000584944 YIPF3Q9GZM5 350 aa12.01□□□□□ -0.49
TRAF4-215ENST00000584944 ATPIF1Q9UII2 106 aa12.01□□□□□ -0.49
TRAF4-215ENST00000584944 NAV3Q8IVL0 2385 aa12.01□□□□□ -0.49
TRAF4-215ENST00000584944 ACANP16112 2415 aa12.01□□□□□ -0.49
TRAF4-215ENST00000584944 SHISA9B4DS77 424 aa12□□□□□ -0.49
TRAF4-215ENST00000584944 ZNF878C9JN71 531 aa12□□□□□ -0.49
TRAF4-215ENST00000584944 F5H5K5 113 aa12□□□□□ -0.49
TRAF4-215ENST00000584944 H0YAE9 185 aa12□□□□□ -0.49
TRAF4-215ENST00000584944 APOC1P02654 83 aa12□□□□□ -0.49
TRAF4-215ENST00000584944 LYNP07948 512 aa12□□□□□ -0.49
TRAF4-215ENST00000584944 H2BFMP0C1H6 154 aa12□□□□□ -0.49
TRAF4-215ENST00000584944 NR4A1P22736 598 aa12□□□□□ -0.49
TRAF4-215ENST00000584944 HTR1FP30939 366 aa12□□□□□ -0.49
TRAF4-215ENST00000584944 RPS27P42677 84 aaKnown RBP12□□□□□ -0.49
TRAF4-215ENST00000584944 RGS6P49758 472 aa12□□□□□ -0.49
TRAF4-215ENST00000584944 TPTEP56180 551 aa12□□□□□ -0.49
TRAF4-215ENST00000584944 TEX30Q5JUR7 227 aa12□□□□□ -0.49
TRAF4-215ENST00000584944 ZNF544Q6NX49 715 aa12□□□□□ -0.49
TRAF4-215ENST00000584944 CFAP77Q6ZQR2 320 aa12□□□□□ -0.49
TRAF4-215ENST00000584944 ZNF584Q8IVC4 421 aa12□□□□□ -0.49
TRAF4-215ENST00000584944 C1orf174Q8IYL3 243 aa12□□□□□ -0.49
TRAF4-215ENST00000584944 OR51G2Q8NGK0 314 aa12□□□□□ -0.49
TRAF4-215ENST00000584944 OR5L1Q8NGL2 311 aa12□□□□□ -0.49
TRAF4-215ENST00000584944 ABHD4Q8TB40 342 aa12□□□□□ -0.49
TRAF4-215ENST00000584944 SMAP2Q8WU79 429 aaPredicted RBP12□□□□□ -0.49
TRAF4-215ENST00000584944 ZNRF4Q8WWF5 429 aa12□□□□□ -0.49
TRAF4-215ENST00000584944 ASB17Q8WXJ9 295 aa12□□□□□ -0.49
TRAF4-215ENST00000584944 SLAMF6Q96DU3 332 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms