RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 TRIM15Q9C019 465 aa10.58□□□□□ -0.72
SS18-219ENST00000581570 MEPEQ9NQ76 525 aaPredicted RBP10.58□□□□□ -0.72
SS18-219ENST00000581570 SLAMF8Q9P0V8 285 aa10.58□□□□□ -0.72
SS18-219ENST00000581570 ANGPT4Q9Y264 503 aa10.58□□□□□ -0.72
SS18-219ENST00000581570 RYR3Q15413 4870 aa10.57□□□□□ -0.72
SS18-219ENST00000581570 IGHV1-69DA0A0B4J2H0 117 aa10.57□□□□□ -0.72
SS18-219ENST00000581570 IGHV3-64DA0A0J9YX35 117 aa10.57□□□□□ -0.72
SS18-219ENST00000581570 LRRC30A6NM36 301 aa10.57□□□□□ -0.72
SS18-219ENST00000581570 ZNF879B4DU55 563 aa10.57□□□□□ -0.72
SS18-219ENST00000581570 OR7A10O76100 309 aa10.57□□□□□ -0.72
SS18-219ENST00000581570 IGHV1-69P01742 117 aa10.57□□□□□ -0.72
SS18-219ENST00000581570 OPN1MWP04001 364 aa10.57□□□□□ -0.72
SS18-219ENST00000581570 OPN1MW2P0DN77 364 aa10.57□□□□□ -0.72
SS18-219ENST00000581570 OPN1MW3P0DN78 364 aa10.57□□□□□ -0.72
SS18-219ENST00000581570 COX5BP10606 129 aa10.57□□□□□ -0.72
SS18-219ENST00000581570 SRP9P49458 86 aaKnown RBP10.57□□□□□ -0.72
SS18-219ENST00000581570 ERFP50548 548 aa10.57□□□□□ -0.72
SS18-219ENST00000581570 LOXL3P58215 753 aa10.57□□□□□ -0.72
SS18-219ENST00000581570 GUCY1A3Q02108 690 aa10.57□□□□□ -0.72
SS18-219ENST00000581570 ZNF181Q2M3W8 571 aa10.57□□□□□ -0.72
SS18-219ENST00000581570 LRIF1Q5T3J3 769 aa10.57□□□□□ -0.72
SS18-219ENST00000581570 ZNF841Q6ZN19 808 aa10.57□□□□□ -0.72
SS18-219ENST00000581570 SYT9Q86SS6 491 aa10.57□□□□□ -0.72
SS18-219ENST00000581570 MOGAT3Q86VF5 341 aa10.57□□□□□ -0.72
SS18-219ENST00000581570 SLC30A8Q8IWU4 369 aa10.57□□□□□ -0.72
SS18-219ENST00000581570 C1orf87Q8N0U7 546 aa10.57□□□□□ -0.72
SS18-219ENST00000581570 GPR32P1Q8NGA4 272 aa10.57□□□□□ -0.72
SS18-219ENST00000581570 OR4D11Q8NGI4 311 aa10.57□□□□□ -0.72
SS18-219ENST00000581570 MOSPD2Q8NHP6 518 aa10.57□□□□□ -0.72
SS18-219ENST00000581570 MAELQ96JY0 434 aaKnown RBP10.57□□□□□ -0.72
SS18-219ENST00000581570 TBX15Q96SF7 602 aa10.57□□□□□ -0.72
SS18-219ENST00000581570 PAIP2Q9BPZ3 127 aaKnown RBP10.57□□□□□ -0.72
SS18-219ENST00000581570 ZNF426Q9BUY5 554 aa10.57□□□□□ -0.72
SS18-219ENST00000581570 DPAGT1Q9H3H5 408 aa10.57□□□□□ -0.72
SS18-219ENST00000581570 SSU72Q9NP77 194 aaKnown RBP10.57□□□□□ -0.72
SS18-219ENST00000581570 ZNF816-ZNF321PA0A0X1KG74 233 aa10.56□□□□□ -0.72
SS18-219ENST00000581570 A0A1W2PPL8 197 aa10.56□□□□□ -0.72
SS18-219ENST00000581570 C12orf71A8MTZ7 269 aa10.56□□□□□ -0.72
SS18-219ENST00000581570 OPN1SWP03999 348 aa10.56□□□□□ -0.72
SS18-219ENST00000581570 LIPFP07098 398 aa10.56□□□□□ -0.72
SS18-219ENST00000581570 VIMP08670 466 aaKnown RBP10.56□□□□□ -0.72
SS18-219ENST00000581570 MMP9P14780 707 aa10.56□□□□□ -0.72
SS18-219ENST00000581570 RAC2P15153 192 aa10.56□□□□□ -0.72
SS18-219ENST00000581570 GPX2P18283 190 aa10.56□□□□□ -0.72
SS18-219ENST00000581570 PMELP40967 661 aa10.56□□□□□ -0.72
SS18-219ENST00000581570 HTR5AP47898 357 aa10.56□□□□□ -0.72
SS18-219ENST00000581570 MPP2Q14168 576 aa10.56□□□□□ -0.72
SS18-219ENST00000581570 ENDOGQ14249 297 aaKnown RBP10.56□□□□□ -0.72
SS18-219ENST00000581570 LAPTM4AQ15012 233 aa10.56□□□□□ -0.72
SS18-219ENST00000581570 CD276Q5ZPR3 534 aa10.56□□□□□ -0.72
SS18-219ENST00000581570 DHRS7BQ6IAN0 325 aaPredicted RBP10.56□□□□□ -0.72
SS18-219ENST00000581570 DCDC5Q6ZRR9 648 aa10.56□□□□□ -0.72
SS18-219ENST00000581570 FOXL2NBQ6ZUU3 175 aa10.56□□□□□ -0.72
SS18-219ENST00000581570 TSPYL5Q86VY4 417 aaPredicted RBP10.56□□□□□ -0.72
SS18-219ENST00000581570 LDLRAD3Q86YD5 345 aa10.56□□□□□ -0.72
SS18-219ENST00000581570 SCCPDHQ8NBX0 429 aa10.56□□□□□ -0.72
SS18-219ENST00000581570 OR10AD1Q8NGE0 317 aa10.56□□□□□ -0.72
SS18-219ENST00000581570 OR13G1Q8NGZ3 307 aa10.56□□□□□ -0.72
SS18-219ENST00000581570 LRTOMTQ8WZ04 291 aa10.56□□□□□ -0.72
SS18-219ENST00000581570 LHX4Q969G2 390 aa10.56□□□□□ -0.72
SS18-219ENST00000581570 COG8Q96MW5 612 aa10.56□□□□□ -0.72
SS18-219ENST00000581570 PRSS27Q9BQR3 290 aa10.56□□□□□ -0.72
SS18-219ENST00000581570 ALG12Q9BV10 488 aa10.56□□□□□ -0.72
SS18-219ENST00000581570 TXNIPQ9H3M7 391 aa10.56□□□□□ -0.72
SS18-219ENST00000581570 KCNK9Q9NPC2 374 aa10.56□□□□□ -0.72
SS18-219ENST00000581570 THAP1Q9NVV9 213 aa10.56□□□□□ -0.72
SS18-219ENST00000581570 VAPAQ9P0L0 249 aa10.56□□□□□ -0.72
SS18-219ENST00000581570 A0A0U1RQK1 487 aa10.55□□□□□ -0.72
SS18-219ENST00000581570 NPIPB13A6NJU9 1138 aa10.55□□□□□ -0.72
SS18-219ENST00000581570 EVPLLA8MZ36 301 aa10.55□□□□□ -0.72
SS18-219ENST00000581570 NPIPB4C9JG80 1138 aa10.55□□□□□ -0.72
SS18-219ENST00000581570 M0QX08 132 aa10.55□□□□□ -0.72
SS18-219ENST00000581570 RGS16O15492 202 aaPredicted RBP10.55□□□□□ -0.72
SS18-219ENST00000581570 DOK2O60496 412 aa10.55□□□□□ -0.72
SS18-219ENST00000581570 TSPAN9O75954 239 aa10.55□□□□□ -0.72
SS18-219ENST00000581570 MT-ND1P03886 318 aa10.55□□□□□ -0.72
SS18-219ENST00000581570 IRF2P14316 349 aa10.55□□□□□ -0.72
SS18-219ENST00000581570 MSR1P21757 451 aa10.55□□□□□ -0.72
SS18-219ENST00000581570 FUT4P22083 530 aa10.55□□□□□ -0.72
SS18-219ENST00000581570 NPY4RP50391 375 aa10.55□□□□□ -0.72
SS18-219ENST00000581570 EGR3Q06889 387 aa10.55□□□□□ -0.72
SS18-219ENST00000581570 TOP3AQ13472 1001 aaPredicted RBP10.55□□□□□ -0.72
SS18-219ENST00000581570 VAX1Q5SQQ9 334 aa10.55□□□□□ -0.72
SS18-219ENST00000581570 METTL11BQ5VVY1 283 aa10.55□□□□□ -0.72
SS18-219ENST00000581570 OR2T2Q6IF00 324 aa10.55□□□□□ -0.72
SS18-219ENST00000581570 C1orf94Q6P1W5 598 aa10.55□□□□□ -0.72
SS18-219ENST00000581570 CLDN22Q8N7P3 220 aa10.55□□□□□ -0.72
SS18-219ENST00000581570 OR8G5Q8NG78 346 aa10.55□□□□□ -0.72
SS18-219ENST00000581570 PFN4Q8NHR9 129 aa10.55□□□□□ -0.72
SS18-219ENST00000581570 FNDC8Q8TC99 324 aa10.55□□□□□ -0.72
SS18-219ENST00000581570 PPP1R14AQ96A00 147 aa10.55□□□□□ -0.72
SS18-219ENST00000581570 SGTBQ96EQ0 304 aa10.55□□□□□ -0.72
SS18-219ENST00000581570 WDFY2Q96P53 400 aa10.55□□□□□ -0.72
SS18-219ENST00000581570 TECTBQ96PL2 329 aa10.55□□□□□ -0.72
SS18-219ENST00000581570 OR52B2Q96RD2 323 aa10.55□□□□□ -0.72
SS18-219ENST00000581570 TMEM109Q9BVC6 243 aa10.55□□□□□ -0.72
SS18-219ENST00000581570 IKZF5Q9H5V7 419 aa10.55□□□□□ -0.72
SS18-219ENST00000581570 CORO2BQ9UQ03 480 aa10.55□□□□□ -0.72
SS18-219ENST00000581570 GMEB1Q9Y692 573 aa10.55□□□□□ -0.72
SS18-219ENST00000581570 F5H5P2 479 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms