RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 MDH2P40926 338 aaKnown RBP8.91□□□□□ -0.98
RFFL-209ENST00000581265 YAP1P46937 504 aaKnown RBP8.91□□□□□ -0.98
RFFL-209ENST00000581265 HTR5AP47898 357 aa8.91□□□□□ -0.98
RFFL-209ENST00000581265 SEC61A1P61619 476 aaKnown RBP8.91□□□□□ -0.98
RFFL-209ENST00000581265 PAX8Q06710 450 aa8.91□□□□□ -0.98
RFFL-209ENST00000581265 HNRNPA0Q13151 305 aaKnown RBP8.91□□□□□ -0.98
RFFL-209ENST00000581265 ZMYND11Q15326 602 aa8.91□□□□□ -0.98
RFFL-209ENST00000581265 MAPRE2Q15555 327 aa8.91□□□□□ -0.98
RFFL-209ENST00000581265 VASH1Q7L8A9 365 aaPredicted RBP8.91□□□□□ -0.98
RFFL-209ENST00000581265 MICU2Q8IYU8 434 aa8.91□□□□□ -0.98
RFFL-209ENST00000581265 BCL6BQ8N143 479 aaPredicted RBP8.91□□□□□ -0.98
RFFL-209ENST00000581265 OR13C2Q8NGS9 318 aa8.91□□□□□ -0.98
RFFL-209ENST00000581265 ACOT11Q8WXI4 607 aaPredicted RBP8.91□□□□□ -0.98
RFFL-209ENST00000581265 C1orf147Q96MC9 270 aaPredicted RBP8.91□□□□□ -0.98
RFFL-209ENST00000581265 FNDC11Q9BVV2 318 aa8.91□□□□□ -0.98
RFFL-209ENST00000581265 POFUT1Q9H488 388 aa8.91□□□□□ -0.98
RFFL-209ENST00000581265 SAR1AQ9NR31 198 aa8.91□□□□□ -0.98
RFFL-209ENST00000581265 ARMCX1Q9P291 453 aa8.91□□□□□ -0.98
RFFL-209ENST00000581265 RHCGQ9UBD6 479 aa8.91□□□□□ -0.98
RFFL-209ENST00000581265 ADAM18Q9Y3Q7 739 aa8.91□□□□□ -0.98
RFFL-209ENST00000581265 TEX13CA0A0J9YWL9 993 aa8.9□□□□□ -0.98
RFFL-209ENST00000581265 PRSS37A4D1T9 235 aa8.9□□□□□ -0.98
RFFL-209ENST00000581265 OR6C6A6NF89 314 aa8.9□□□□□ -0.98
RFFL-209ENST00000581265 DNAJC9-AS1A6NH13 148 aa8.9□□□□□ -0.98
RFFL-209ENST00000581265 POM121CA8CG34 1229 aa8.9□□□□□ -0.98
RFFL-209ENST00000581265 H7C1C5 153 aa8.9□□□□□ -0.98
RFFL-209ENST00000581265 J3KTA2 159 aa8.9□□□□□ -0.98
RFFL-209ENST00000581265 J3QW42 95 aa8.9□□□□□ -0.98
RFFL-209ENST00000581265 IFNL4K9M1U5 179 aa8.9□□□□□ -0.98
RFFL-209ENST00000581265 XKRYO14609 159 aa8.9□□□□□ -0.98
RFFL-209ENST00000581265 CDC42EP2O14613 210 aa8.9□□□□□ -0.98
RFFL-209ENST00000581265 DOK2O60496 412 aa8.9□□□□□ -0.98
RFFL-209ENST00000581265 FSTL3O95633 263 aa8.9□□□□□ -0.98
RFFL-209ENST00000581265 RNASE1P07998 156 aaKnown RBP8.9□□□□□ -0.98
RFFL-209ENST00000581265 ZNF26P17031 533 aaPredicted RBP8.9□□□□□ -0.98
RFFL-209ENST00000581265 CD80P33681 288 aa8.9□□□□□ -0.98
RFFL-209ENST00000581265 RPL4P36578 427 aaKnown RBP8.9□□□□□ -0.98
RFFL-209ENST00000581265 RBMXP38159 391 aaKnown RBP8.9□□□□□ -0.98
RFFL-209ENST00000581265 LSM6P62312 80 aaKnown RBP8.9□□□□□ -0.98
RFFL-209ENST00000581265 LCN6P62502 163 aa8.9□□□□□ -0.98
RFFL-209ENST00000581265 GUCY1A3Q02108 690 aa8.9□□□□□ -0.98
RFFL-209ENST00000581265 PAX2Q02962 417 aa8.9□□□□□ -0.98
RFFL-209ENST00000581265 AQP6Q13520 282 aa8.9□□□□□ -0.98
RFFL-209ENST00000581265 ZBED5Q49AG3 693 aa8.9□□□□□ -0.98
RFFL-209ENST00000581265 ESCO2Q56NI9 601 aa8.9□□□□□ -0.98
RFFL-209ENST00000581265 SLC27A4Q6P1M0 643 aa8.9□□□□□ -0.98
RFFL-209ENST00000581265 ZNF730Q6ZMV8 503 aa8.9□□□□□ -0.98
RFFL-209ENST00000581265 MBOAT2Q6ZWT7 520 aa8.9□□□□□ -0.98
RFFL-209ENST00000581265 FAM122BQ7Z309 247 aa8.9□□□□□ -0.98
RFFL-209ENST00000581265 HDXQ7Z353 690 aa8.9□□□□□ -0.98
RFFL-209ENST00000581265 VTCN1Q7Z7D3 282 aa8.9□□□□□ -0.98
RFFL-209ENST00000581265 MUC20Q8N307 709 aaPredicted RBP8.9□□□□□ -0.98
RFFL-209ENST00000581265 ITLN1Q8WWA0 313 aa8.9□□□□□ -0.98
RFFL-209ENST00000581265 Q96M85 177 aa8.9□□□□□ -0.98
RFFL-209ENST00000581265 ZNF48Q96MX3 618 aaPredicted RBP8.9□□□□□ -0.98
RFFL-209ENST00000581265 OR2V2Q96R30 315 aa8.9□□□□□ -0.98
RFFL-209ENST00000581265 MRI1Q9BV20 369 aa8.9□□□□□ -0.98
RFFL-209ENST00000581265 VIPAS39Q9H9C1 493 aa8.9□□□□□ -0.98
RFFL-209ENST00000581265 NMNAT1Q9HAN9 279 aaPredicted RBP8.9□□□□□ -0.98
RFFL-209ENST00000581265 TMEM165Q9HC07 324 aa8.9□□□□□ -0.98
RFFL-209ENST00000581265 GCM1Q9NP62 436 aa8.9□□□□□ -0.98
RFFL-209ENST00000581265 IL20RAQ9UHF4 553 aa8.9□□□□□ -0.98
RFFL-209ENST00000581265 AP3M1Q9Y2T2 418 aa8.9□□□□□ -0.98
RFFL-209ENST00000581265 CEACAM18A8MTB9 384 aa8.89□□□□□ -0.99
RFFL-209ENST00000581265 PTP4A3O75365 173 aa8.89□□□□□ -0.99
RFFL-209ENST00000581265 CTLA4P16410 223 aa8.89□□□□□ -0.99
RFFL-209ENST00000581265 ERFP50548 548 aa8.89□□□□□ -0.99
RFFL-209ENST00000581265 BAMBIQ13145 260 aa8.89□□□□□ -0.99
RFFL-209ENST00000581265 MESTQ5EB52 335 aa8.89□□□□□ -0.99
RFFL-209ENST00000581265 GPR139Q6DWJ6 353 aa8.89□□□□□ -0.99
RFFL-209ENST00000581265 TBPL2Q6SJ96 375 aa8.89□□□□□ -0.99
RFFL-209ENST00000581265 FBXW12Q6X9E4 464 aa8.89□□□□□ -0.99
RFFL-209ENST00000581265 C9orf139Q6ZV77 190 aa8.89□□□□□ -0.99
RFFL-209ENST00000581265 GLB1L2Q8IW92 636 aa8.89□□□□□ -0.99
RFFL-209ENST00000581265 SLC15A3Q8IY34 581 aa8.89□□□□□ -0.99
RFFL-209ENST00000581265 ATG16L2Q8NAA4 619 aa8.89□□□□□ -0.99
RFFL-209ENST00000581265 OR8G5Q8NG78 346 aa8.89□□□□□ -0.99
RFFL-209ENST00000581265 OR52E2Q8NGJ4 325 aa8.89□□□□□ -0.99
RFFL-209ENST00000581265 OR5L1Q8NGL2 311 aa8.89□□□□□ -0.99
RFFL-209ENST00000581265 OR13G1Q8NGZ3 307 aa8.89□□□□□ -0.99
RFFL-209ENST00000581265 OR1F12Q8NHA8 337 aa8.89□□□□□ -0.99
RFFL-209ENST00000581265 SLC7A6Q92536 515 aa8.89□□□□□ -0.99
RFFL-209ENST00000581265 SLC25A28Q96A46 364 aa8.89□□□□□ -0.99
RFFL-209ENST00000581265 DACT3Q96B18 629 aaPredicted RBP8.89□□□□□ -0.99
RFFL-209ENST00000581265 RASD2Q96D21 266 aa8.89□□□□□ -0.99
RFFL-209ENST00000581265 DUX5Q96PT3 197 aa8.89□□□□□ -0.99
RFFL-209ENST00000581265 C1QTNF5Q9BXJ0 243 aa8.89□□□□□ -0.99
RFFL-209ENST00000581265 ANKRD19PQ9H560 264 aa8.89□□□□□ -0.99
RFFL-209ENST00000581265 NRIP3Q9NQ35 241 aa8.89□□□□□ -0.99
RFFL-209ENST00000581265 CMTM6Q9NX76 183 aa8.89□□□□□ -0.99
RFFL-209ENST00000581265 ASH2LQ9UBL3 628 aa8.89□□□□□ -0.99
RFFL-209ENST00000581265 OR5V1Q9UGF6 321 aa8.89□□□□□ -0.99
RFFL-209ENST00000581265 ATPIF1Q9UII2 106 aa8.89□□□□□ -0.99
RFFL-209ENST00000581265 LRCH1Q9Y2L9 728 aa8.89□□□□□ -0.99
RFFL-209ENST00000581265 DOCK11Q5JSL3 2073 aa8.89□□□□□ -0.99
RFFL-209ENST00000581265 A0A1B0GWJ7 208 aa8.88□□□□□ -0.99
RFFL-209ENST00000581265 SLC16A7O60669 478 aa8.88□□□□□ -0.99
RFFL-209ENST00000581265 KHDRBS3O75525 346 aaKnown RBP8.88□□□□□ -0.99
RFFL-209ENST00000581265 TROVE2P10155 538 aaKnown RBP eCLIP8.88□□□□□ -0.99
RFFL-209ENST00000581265 GPR4P46093 362 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms