RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 SLC22A6Q4U2R8 563 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 ELFN2Q5R3F8 820 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 CARD17Q5XLA6 110 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 OLFML2AQ68BL7 652 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 COX15Q7KZN9 410 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 COMMD7Q86VX2 200 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 TDHQ8IZJ6 230 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 GALNT16Q8N428 558 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 APCDD1LQ8NCL9 501 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 CMTM3Q96MX0 182 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 CCNL2Q96S94 520 aaPredicted RBP9.38□□□□□ -0.91
TOP3A-209ENST00000580095 C12orf57Q99622 126 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 FBXO4Q9UKT5 387 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 FRYQ5TBA9 3013 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 LOC100289279A0A1B0GTE1 492 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 TMEM269A0A1B0GVZ9 245 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 RPS10-NUDT3A0A1W2PQS6 291 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 NPIPA5E9PKD4 350 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 SLC17A2O00624 439 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 SSX5O60225 188 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 ALOX12BO75342 701 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 DCNP07585 359 aaKnown RBP9.38□□□□□ -0.91
TOP3A-209ENST00000580095 DNASE1L1P49184 302 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 PNLIPRP2P54317 469 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 SCRN3Q0VDG4 424 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 FOXF1Q12946 379 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 OPCMLQ14982 345 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 SCGB2B2Q4G0G5 96 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 ZNF626Q68DY1 528 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 TMEM81Q6P7N7 255 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 C11orf88Q6PI97 169 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 ALKAL2Q6UX46 152 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 ZNF574Q6ZN55 896 aaPredicted RBP9.38□□□□□ -0.91
TOP3A-209ENST00000580095 GPAT4Q86UL3 456 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 OR52N5Q8NH56 324 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 TNFAIP8L1Q8WVP5 186 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 MSANTD3Q96H12 275 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 EXO5Q9H790 373 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 NPIPA1Q9UND3 350 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 NPTNQ9Y639 398 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 TRBV11-1A0A0K0K1C0 115 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 NAP1L6A6NFF2 107 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 GIMD1P0DJR0 217 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 ZNF823P16415 610 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 CDAP32320 146 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 GNALP38405 381 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 MNDAP41218 407 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 SLC26A5P58743 744 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 TLE3Q04726 772 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 RELQ04864 619 aaPredicted RBP9.38□□□□□ -0.91
TOP3A-209ENST00000580095 TEX30Q5JUR7 227 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 ZNF441Q8N8Z8 693 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 OR4D6Q8NGJ1 314 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 OR6C1Q96RD1 312 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 SOX7Q9BT81 388 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 ZNF230Q9UIE0 474 aaPredicted RBP9.38□□□□□ -0.91
TOP3A-209ENST00000580095 A0A1W2PNR3 127 aa9.37□□□□□ -0.91
TOP3A-209ENST00000580095 FTCDNL1E5RQL4 147 aa9.37□□□□□ -0.91
TOP3A-209ENST00000580095 L7N2F9 121 aa9.37□□□□□ -0.91
TOP3A-209ENST00000580095 BCAT2O15382 392 aaPredicted RBP9.37□□□□□ -0.91
TOP3A-209ENST00000580095 NUDT21O43809 227 aaKnown RBP9.37□□□□□ -0.91
TOP3A-209ENST00000580095 EFNA2O43921 213 aa9.37□□□□□ -0.91
TOP3A-209ENST00000580095 MT-ATP6P00846 226 aa9.37□□□□□ -0.91
TOP3A-209ENST00000580095 IGF2P01344 180 aa9.37□□□□□ -0.91
TOP3A-209ENST00000580095 HTR2CP28335 458 aa9.37□□□□□ -0.91
TOP3A-209ENST00000580095 NUBP1P53384 320 aa9.37□□□□□ -0.91
TOP3A-209ENST00000580095 DCAF7P61962 342 aa9.37□□□□□ -0.91
TOP3A-209ENST00000580095 RBMS2Q15434 407 aaKnown RBP9.37□□□□□ -0.91
TOP3A-209ENST00000580095 GFOD2Q3B7J2 385 aa9.37□□□□□ -0.91
TOP3A-209ENST00000580095 ANKRD39Q53RE8 183 aa9.37□□□□□ -0.91
TOP3A-209ENST00000580095 LCN10Q6JVE6 187 aa9.37□□□□□ -0.91
TOP3A-209ENST00000580095 KCTD18Q6PI47 426 aaPredicted RBP9.37□□□□□ -0.91
TOP3A-209ENST00000580095 CFAP77Q6ZQR2 320 aa9.37□□□□□ -0.91
TOP3A-209ENST00000580095 CD163Q86VB7 1156 aa9.37□□□□□ -0.91
TOP3A-209ENST00000580095 CATSPERDQ86XM0 798 aa9.37□□□□□ -0.91
TOP3A-209ENST00000580095 ZNF248Q8NDW4 579 aa9.37□□□□□ -0.91
TOP3A-209ENST00000580095 SLC26A10Q8NG04 563 aa9.37□□□□□ -0.91
TOP3A-209ENST00000580095 FGGYQ96C11 551 aa9.37□□□□□ -0.91
TOP3A-209ENST00000580095 MVB12AQ96EY5 273 aa9.37□□□□□ -0.91
TOP3A-209ENST00000580095 SLC41A2Q96JW4 573 aa9.37□□□□□ -0.91
TOP3A-209ENST00000580095 PHF7Q9BWX1 381 aaPredicted RBP9.37□□□□□ -0.91
TOP3A-209ENST00000580095 POFUT1Q9H488 388 aa9.37□□□□□ -0.91
TOP3A-209ENST00000580095 SEC61A2Q9H9S3 476 aa9.37□□□□□ -0.91
TOP3A-209ENST00000580095 KLRF1Q9NZS2 232 aa9.37□□□□□ -0.91
TOP3A-209ENST00000580095 CKLFQ9UBR5 152 aa9.37□□□□□ -0.91
TOP3A-209ENST00000580095 UBQLN2Q9UHD9 624 aa9.37□□□□□ -0.91
TOP3A-209ENST00000580095 PHF3Q92576 2039 aaKnown RBP9.37□□□□□ -0.91
TOP3A-209ENST00000580095 OR6C65A6NJZ3 312 aa9.37□□□□□ -0.91
TOP3A-209ENST00000580095 PRAF2O60831 178 aa9.37□□□□□ -0.91
TOP3A-209ENST00000580095 ZNF432O94892 652 aa9.37□□□□□ -0.91
TOP3A-209ENST00000580095 HEXBP07686 556 aa9.37□□□□□ -0.91
TOP3A-209ENST00000580095 GLB1P16278 677 aa9.37□□□□□ -0.91
TOP3A-209ENST00000580095 BIDP55957 195 aa9.37□□□□□ -0.91
TOP3A-209ENST00000580095 MFAP5Q13361 173 aa9.37□□□□□ -0.91
TOP3A-209ENST00000580095 RSPO4Q2I0M5 234 aaPredicted RBP9.37□□□□□ -0.91
TOP3A-209ENST00000580095 STEAP1BQ6NZ63 245 aa9.37□□□□□ -0.91
TOP3A-209ENST00000580095 SLC36A1Q7Z2H8 476 aa9.37□□□□□ -0.91
TOP3A-209ENST00000580095 SLC25A28Q96A46 364 aa9.37□□□□□ -0.91
TOP3A-209ENST00000580095 SEH1LQ96EE3 360 aa9.37□□□□□ -0.91
TOP3A-209ENST00000580095 PTGES2Q9H7Z7 377 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms