RNA–Protein interactions for RNA: ENST00000577830.5

CUEDC1-206, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC1, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-206ENST00000577830 NPIPA5E9PKD4 350 aa13.23□□□□□ -0.29
CUEDC1-206ENST00000577830 ATPAF1Q5TC12 328 aaPredicted RBP13.23□□□□□ -0.29
CUEDC1-206ENST00000577830 FJX1Q86VR8 437 aa13.23□□□□□ -0.29
CUEDC1-206ENST00000577830 INO80EQ8NBZ0 244 aaPredicted RBP13.23□□□□□ -0.29
CUEDC1-206ENST00000577830 CLEC1AQ8NC01 280 aa13.23□□□□□ -0.29
CUEDC1-206ENST00000577830 OR4D6Q8NGJ1 314 aa13.23□□□□□ -0.29
CUEDC1-206ENST00000577830 THAP6Q8TBB0 222 aa13.23□□□□□ -0.29
CUEDC1-206ENST00000577830 GPBAR1Q8TDU6 330 aa13.23□□□□□ -0.29
CUEDC1-206ENST00000577830 LRRC61Q9BV99 259 aa13.23□□□□□ -0.29
CUEDC1-206ENST00000577830 BANF2Q9H503 90 aa13.23□□□□□ -0.29
CUEDC1-206ENST00000577830 MRPL22Q9NWU5 206 aaKnown RBP13.23□□□□□ -0.29
CUEDC1-206ENST00000577830 NPIPA1Q9UND3 350 aa13.23□□□□□ -0.29
CUEDC1-206ENST00000577830 PRAMEF26H0Y7S4 382 aa13.22□□□□□ -0.29
CUEDC1-206ENST00000577830 ZNF432O94892 652 aa13.22□□□□□ -0.29
CUEDC1-206ENST00000577830 ICAM2P13598 275 aa13.22□□□□□ -0.29
CUEDC1-206ENST00000577830 EPHA4P54764 986 aa13.22□□□□□ -0.29
CUEDC1-206ENST00000577830 RPL27P61353 136 aaKnown RBP13.22□□□□□ -0.29
CUEDC1-206ENST00000577830 PAPD4Q6PIY7 484 aaKnown RBP13.22□□□□□ -0.29
CUEDC1-206ENST00000577830 LANCL3Q6ZV70 420 aa13.22□□□□□ -0.29
CUEDC1-206ENST00000577830 OR10H5Q8NGA6 315 aa13.22□□□□□ -0.29
CUEDC1-206ENST00000577830 ASB5Q8WWX0 329 aa13.22□□□□□ -0.29
CUEDC1-206ENST00000577830 LDOC1O95751 146 aaPredicted RBP13.22□□□□□ -0.29
CUEDC1-206ENST00000577830 PPP1R1AQ13522 171 aa13.22□□□□□ -0.29
CUEDC1-206ENST00000577830 EXOSC6Q5RKV6 272 aaKnown RBP13.22□□□□□ -0.29
CUEDC1-206ENST00000577830 BPIFCQ8NFQ6 507 aa13.22□□□□□ -0.29
CUEDC1-206ENST00000577830 FAM71F1Q96KD3 344 aaPredicted RBP13.22□□□□□ -0.29
CUEDC1-206ENST00000577830 PTGES2Q9H7Z7 377 aa13.22□□□□□ -0.29
CUEDC1-206ENST00000577830 TREM1Q9NP99 234 aa13.22□□□□□ -0.29
CUEDC1-206ENST00000577830 DCAF16Q9NXF7 216 aa13.22□□□□□ -0.29
CUEDC1-206ENST00000577830 HHLA2Q9UM44 414 aa13.22□□□□□ -0.29
CUEDC1-206ENST00000577830 OR14I1A6ND48 311 aa13.22□□□□□ -0.29
CUEDC1-206ENST00000577830 RHPN2P1A8MT19 583 aa13.22□□□□□ -0.29
CUEDC1-206ENST00000577830 HRH1P35367 487 aa13.22□□□□□ -0.29
CUEDC1-206ENST00000577830 SLC37A1P57057 533 aa13.22□□□□□ -0.29
CUEDC1-206ENST00000577830 GLO1Q04760 184 aa13.22□□□□□ -0.29
CUEDC1-206ENST00000577830 FAM122CQ6P4D5 195 aa13.22□□□□□ -0.29
CUEDC1-206ENST00000577830 OR5M9Q8NGP3 310 aa13.22□□□□□ -0.29
CUEDC1-206ENST00000577830 ARL5BQ96KC2 179 aa13.22□□□□□ -0.29
CUEDC1-206ENST00000577830 FOXQ1Q9C009 403 aa13.22□□□□□ -0.29
CUEDC1-206ENST00000577830 CST11Q9H112 138 aa13.22□□□□□ -0.29
CUEDC1-206ENST00000577830 MBD2Q9UBB5 411 aa13.22□□□□□ -0.29
CUEDC1-206ENST00000577830 AUP1Q9Y679 476 aa13.22□□□□□ -0.29
CUEDC1-206ENST00000577830 TICRRQ7Z2Z1 1910 aa13.22□□□□□ -0.29
CUEDC1-206ENST00000577830 SPTY2D1-AS1A0A0U1RR47 76 aa13.21□□□□□ -0.29
CUEDC1-206ENST00000577830 MPIG6BO95866 241 aa13.21□□□□□ -0.29
CUEDC1-206ENST00000577830 POU2F2P09086 479 aa13.21□□□□□ -0.29
CUEDC1-206ENST00000577830 FUT7Q11130 342 aa13.21□□□□□ -0.29
CUEDC1-206ENST00000577830 MANEAQ5SRI9 462 aa13.21□□□□□ -0.29
CUEDC1-206ENST00000577830 LINC00469Q8N7U9 141 aa13.21□□□□□ -0.29
CUEDC1-206ENST00000577830 LRRC75AQ8NAA5 344 aa13.21□□□□□ -0.29
CUEDC1-206ENST00000577830 ROBO4Q8WZ75 1007 aa13.21□□□□□ -0.29
CUEDC1-206ENST00000577830 DCUN1D4Q92564 292 aa13.21□□□□□ -0.29
CUEDC1-206ENST00000577830 CMTM3Q96MX0 182 aa13.21□□□□□ -0.29
CUEDC1-206ENST00000577830 LRFN5Q96NI6 719 aa13.21□□□□□ -0.29
CUEDC1-206ENST00000577830 SLC6A15Q9H2J7 730 aa13.21□□□□□ -0.29
CUEDC1-206ENST00000577830 CUTCQ9NTM9 273 aa13.21□□□□□ -0.29
CUEDC1-206ENST00000577830 COPS7AQ9UBW8 275 aa13.21□□□□□ -0.29
CUEDC1-206ENST00000577830 KLK13Q9UKR3 277 aa13.21□□□□□ -0.29
CUEDC1-206ENST00000577830 OR5K4A6NMS3 321 aa13.21□□□□□ -0.29
CUEDC1-206ENST00000577830 NSA2O95478 260 aaKnown RBP13.21□□□□□ -0.29
CUEDC1-206ENST00000577830 NPY4RP50391 375 aa13.21□□□□□ -0.29
CUEDC1-206ENST00000577830 ZNF273Q14593 569 aa13.21□□□□□ -0.29
CUEDC1-206ENST00000577830 C1orf140Q5VVS0 124 aa13.21□□□□□ -0.29
CUEDC1-206ENST00000577830 TMEM200AQ86VY9 491 aa13.21□□□□□ -0.29
CUEDC1-206ENST00000577830 LHFPL5Q8TAF8 219 aa13.21□□□□□ -0.29
CUEDC1-206ENST00000577830 MRI1Q9BV20 369 aa13.21□□□□□ -0.29
CUEDC1-206ENST00000577830 EXOSC3Q9NQT5 275 aaKnown RBP13.21□□□□□ -0.29
CUEDC1-206ENST00000577830 GMEB2Q9UKD1 530 aa13.21□□□□□ -0.29
CUEDC1-206ENST00000577830 OR52A1Q9UKL2 312 aa13.21□□□□□ -0.29
CUEDC1-206ENST00000577830 TRAV36DV7A0A075B6V5 113 aa13.21□□□□□ -0.3
CUEDC1-206ENST00000577830 TRAV14DV4A0A0A6YYC5 116 aa13.21□□□□□ -0.3
CUEDC1-206ENST00000577830 GPR31O00270 319 aa13.21□□□□□ -0.3
CUEDC1-206ENST00000577830 IGHV4-34P06331 123 aa13.21□□□□□ -0.3
CUEDC1-206ENST00000577830 ERCC1P07992 297 aaPredicted RBP13.21□□□□□ -0.3
CUEDC1-206ENST00000577830 PGCP20142 388 aa13.21□□□□□ -0.3
CUEDC1-206ENST00000577830 YPEL5P62699 121 aa13.21□□□□□ -0.3
CUEDC1-206ENST00000577830 EGR3Q06889 387 aa13.21□□□□□ -0.3
CUEDC1-206ENST00000577830 PRTGQ2VWP7 1150 aa13.21□□□□□ -0.3
CUEDC1-206ENST00000577830 AWAT2Q6E213 333 aa13.21□□□□□ -0.3
CUEDC1-206ENST00000577830 ADAD2Q8NCV1 583 aaKnown RBP13.21□□□□□ -0.3
CUEDC1-206ENST00000577830 OR52N4Q8NGI2 321 aa13.21□□□□□ -0.3
CUEDC1-206ENST00000577830 MRPS24Q96EL2 167 aaKnown RBP13.21□□□□□ -0.3
CUEDC1-206ENST00000577830 SLC19A3Q9BZV2 496 aa13.21□□□□□ -0.3
CUEDC1-206ENST00000577830 RNF215Q9Y6U7 377 aa13.21□□□□□ -0.3
CUEDC1-206ENST00000577830 TRBV5-7A0A0A0MS05 114 aa13.2□□□□□ -0.3
CUEDC1-206ENST00000577830 A0A1B0GW55 424 aa13.2□□□□□ -0.3
CUEDC1-206ENST00000577830 METTL21EPA6NDL7 271 aa13.2□□□□□ -0.3
CUEDC1-206ENST00000577830 ZNF705EA8MWA4 302 aaPredicted RBP13.2□□□□□ -0.3
CUEDC1-206ENST00000577830 DUX4L2P0CJ85 424 aa13.2□□□□□ -0.3
CUEDC1-206ENST00000577830 DUX4L3P0CJ86 424 aa13.2□□□□□ -0.3
CUEDC1-206ENST00000577830 DUX4L4P0CJ87 422 aa13.2□□□□□ -0.3
CUEDC1-206ENST00000577830 DUX4L5P0CJ88 424 aa13.2□□□□□ -0.3
CUEDC1-206ENST00000577830 DUX4L6P0CJ89 424 aa13.2□□□□□ -0.3
CUEDC1-206ENST00000577830 DUX4L7P0CJ90 424 aa13.2□□□□□ -0.3
CUEDC1-206ENST00000577830 EXD3Q8N9H8 876 aa13.2□□□□□ -0.3
CUEDC1-206ENST00000577830 ADAMTS18Q8TE60 1221 aa13.2□□□□□ -0.3
CUEDC1-206ENST00000577830 PARP12Q9H0J9 701 aaKnown RBP13.2□□□□□ -0.3
CUEDC1-206ENST00000577830 DUSP15Q9H1R2 295 aaPredicted RBP13.2□□□□□ -0.3
CUEDC1-206ENST00000577830 DUX4Q9UBX2 424 aa13.2□□□□□ -0.3
CUEDC1-206ENST00000577830 PHF3Q92576 2039 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms